BLASTX nr result

ID: Bupleurum21_contig00028544 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00028544
         (768 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002521376.1| dead box ATP-dependent RNA helicase, putativ...   295   9e-78
ref|XP_002438954.1| hypothetical protein SORBIDRAFT_10g028940 [S...   294   2e-77
ref|XP_002278119.1| PREDICTED: eukaryotic initiation factor 4A-1...   294   2e-77
emb|CAN61608.1| hypothetical protein VITISV_040122 [Vitis vinifera]   294   2e-77
gb|ADB07168.1| DEAD-box RNA helicase-like protein [Prunus persic...   293   4e-77

>ref|XP_002521376.1| dead box ATP-dependent RNA helicase, putative [Ricinus communis]
           gi|223539454|gb|EEF41044.1| dead box ATP-dependent RNA
           helicase, putative [Ricinus communis]
          Length = 413

 Score =  295 bits (754), Expect = 9e-78
 Identities = 149/208 (71%), Positives = 175/208 (84%), Gaps = 1/208 (0%)
 Frame = -2

Query: 767 ILQLLPAKVQVGAFSTTMSPVALEVTKQIMNKPVCILLKQDEL-FKHIKQFYLNVEKEEF 591
           I QLLPAKVQVG FS TM P ALE+T++ MNKPV IL+K+DEL  + IKQFY+NVEKEE+
Sbjct: 206 IFQLLPAKVQVGVFSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFYVNVEKEEW 265

Query: 590 KLETLCDIYETLDITQSIIFINTSRKVDWVTDKMRSRDHTVSAVHECMDWCTINIILREF 411
           KLETLCD+YETL ITQS+IF+NT RKVDW+TDKMRSRDHTVSA H  MD  T +II+REF
Sbjct: 266 KLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREF 325

Query: 410 QSGSSRLLITTDILPHGLDIPQVSLVINYDLPNQLKNYLPRIGRCGRFGRKGFVFNFVTK 231
           +SGSSR+LITTD+L  G+D+ QVSLVINYDLP Q +NYL RIGR GRFGRKG   NFVT+
Sbjct: 326 RSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRGGRFGRKGVAINFVTR 385

Query: 230 DDESMLMDIQMLCNVVMEELPANIANLM 147
           DDE ML DIQ   NVV+EELP+N+A+L+
Sbjct: 386 DDERMLFDIQKFYNVVIEELPSNVADLL 413


>ref|XP_002438954.1| hypothetical protein SORBIDRAFT_10g028940 [Sorghum bicolor]
           gi|241917177|gb|EER90321.1| hypothetical protein
           SORBIDRAFT_10g028940 [Sorghum bicolor]
          Length = 414

 Score =  294 bits (752), Expect = 2e-77
 Identities = 147/208 (70%), Positives = 175/208 (84%), Gaps = 1/208 (0%)
 Frame = -2

Query: 767 ILQLLPAKVQVGAFSTTMSPVALEVTKQIMNKPVCILLKQDEL-FKHIKQFYLNVEKEEF 591
           I QLLPAK+QVG FS TM P ALE+T++ MNKPV IL+K+DEL  + IKQFY+NVEKE++
Sbjct: 207 IFQLLPAKIQVGVFSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFYVNVEKEDW 266

Query: 590 KLETLCDIYETLDITQSIIFINTSRKVDWVTDKMRSRDHTVSAVHECMDWCTINIILREF 411
           KL+TLCD+YETL ITQS+IF+NT RKVDW+TDKMRSRDHTVSA H  MD  T +II+REF
Sbjct: 267 KLDTLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREF 326

Query: 410 QSGSSRLLITTDILPHGLDIPQVSLVINYDLPNQLKNYLPRIGRCGRFGRKGFVFNFVTK 231
           +SGSSR+LITTD+L  G+D+ QVSLVINYDLP Q +NYL RIGR GRFGRKG   NFVT+
Sbjct: 327 RSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTR 386

Query: 230 DDESMLMDIQMLCNVVMEELPANIANLM 147
           DDE ML DIQ   NVV+EELPAN+A+L+
Sbjct: 387 DDERMLFDIQKFYNVVIEELPANVADLL 414


>ref|XP_002278119.1| PREDICTED: eukaryotic initiation factor 4A-11 [Vitis vinifera]
           gi|296081635|emb|CBI20640.3| unnamed protein product
           [Vitis vinifera]
          Length = 413

 Score =  294 bits (752), Expect = 2e-77
 Identities = 147/208 (70%), Positives = 175/208 (84%), Gaps = 1/208 (0%)
 Frame = -2

Query: 767 ILQLLPAKVQVGAFSTTMSPVALEVTKQIMNKPVCILLKQDEL-FKHIKQFYLNVEKEEF 591
           I QLLP+K+QVG FS TM P ALE+T++ MNKPV IL+K+DEL  + IKQFY+NV+KEE+
Sbjct: 206 IFQLLPSKIQVGVFSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFYVNVDKEEW 265

Query: 590 KLETLCDIYETLDITQSIIFINTSRKVDWVTDKMRSRDHTVSAVHECMDWCTINIILREF 411
           KLETLCD+YETL ITQS+IF+NT RKVDW+TDKMRSRDHTVSA H  MD  T +II+REF
Sbjct: 266 KLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREF 325

Query: 410 QSGSSRLLITTDILPHGLDIPQVSLVINYDLPNQLKNYLPRIGRCGRFGRKGFVFNFVTK 231
           +SGSSR+LITTD+L  G+D+ QVSLVINYDLP Q +NYL RIGR GRFGRKG   NFVTK
Sbjct: 326 RSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTK 385

Query: 230 DDESMLMDIQMLCNVVMEELPANIANLM 147
           DDE ML DIQ   NVV+EELP+N+A+L+
Sbjct: 386 DDERMLFDIQRFYNVVVEELPSNVADLL 413


>emb|CAN61608.1| hypothetical protein VITISV_040122 [Vitis vinifera]
          Length = 413

 Score =  294 bits (752), Expect = 2e-77
 Identities = 147/208 (70%), Positives = 175/208 (84%), Gaps = 1/208 (0%)
 Frame = -2

Query: 767 ILQLLPAKVQVGAFSTTMSPVALEVTKQIMNKPVCILLKQDEL-FKHIKQFYLNVEKEEF 591
           I QLLP+K+QVG FS TM P ALE+T++ MNKPV IL+K+DEL  + IKQFY+NV+KEE+
Sbjct: 206 IFQLLPSKIQVGVFSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFYVNVDKEEW 265

Query: 590 KLETLCDIYETLDITQSIIFINTSRKVDWVTDKMRSRDHTVSAVHECMDWCTINIILREF 411
           KLETLCD+YETL ITQS+IF+NT RKVDW+TDKMRSRDHTVSA H  MD  T +II+REF
Sbjct: 266 KLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREF 325

Query: 410 QSGSSRLLITTDILPHGLDIPQVSLVINYDLPNQLKNYLPRIGRCGRFGRKGFVFNFVTK 231
           +SGSSR+LITTD+L  G+D+ QVSLVINYDLP Q +NYL RIGR GRFGRKG   NFVTK
Sbjct: 326 RSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTK 385

Query: 230 DDESMLMDIQMLCNVVMEELPANIANLM 147
           DDE ML DIQ   NVV+EELP+N+A+L+
Sbjct: 386 DDERMLFDIQRFYNVVVEELPSNVADLL 413


>gb|ADB07168.1| DEAD-box RNA helicase-like protein [Prunus persica]
           gi|283049402|gb|ADB07169.1| DEAD-box RNA helicase-like
           protein [Prunus persica]
          Length = 413

 Score =  293 bits (749), Expect = 4e-77
 Identities = 147/208 (70%), Positives = 175/208 (84%), Gaps = 1/208 (0%)
 Frame = -2

Query: 767 ILQLLPAKVQVGAFSTTMSPVALEVTKQIMNKPVCILLKQDEL-FKHIKQFYLNVEKEEF 591
           I QLLP+KVQVG FS TM P ALE+T++ MNKPV IL+K+DEL  + IKQFY+NV+KEE+
Sbjct: 206 IFQLLPSKVQVGVFSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFYVNVDKEEW 265

Query: 590 KLETLCDIYETLDITQSIIFINTSRKVDWVTDKMRSRDHTVSAVHECMDWCTINIILREF 411
           KLETLCD+YETL ITQS+IF+NT RKVDW+TDKMRSRDHTVSA H  MD  T +II+REF
Sbjct: 266 KLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREF 325

Query: 410 QSGSSRLLITTDILPHGLDIPQVSLVINYDLPNQLKNYLPRIGRCGRFGRKGFVFNFVTK 231
           +SGSSR+LITTD+L  G+D+ QVSLVINYDLP Q +NYL RIGR GRFGRKG   NFVT+
Sbjct: 326 RSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTR 385

Query: 230 DDESMLMDIQMLCNVVMEELPANIANLM 147
           DDE ML DIQ   NVV+EELP+N+A+L+
Sbjct: 386 DDERMLYDIQRFYNVVIEELPSNVADLL 413


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