BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00028541
         (427 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002531759.1| conserved hypothetical protein [Ricinus comm...    90   2e-16
ref|XP_002532007.1| conserved hypothetical protein [Ricinus comm...    83   3e-14
ref|XP_003598202.1| 60S ribosomal protein L23 [Medicago truncatu...    82   3e-14
ref|XP_002522452.1| nucleic acid binding protein, putative [Rici...    79   3e-13
ref|XP_003635424.1| PREDICTED: LOW QUALITY PROTEIN: putative rib...    76   2e-12

>ref|XP_002531759.1| conserved hypothetical protein [Ricinus communis]
           gi|223528595|gb|EEF30615.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 163

 Score = 90.1 bits (222), Expect = 2e-16
 Identities = 47/125 (37%), Positives = 74/125 (59%)
 Frame = +2

Query: 50  IWVRPQLNSIKVSVDASVFKDADAFGLGILARDSDGVLVQAKSVRKQGTVDPVMAEAIAI 229
           +W  P L S+KV++DA++F + D+ G+G + +D  G+ V A +V   G   P +AE +AI
Sbjct: 27  VWNTPSLGSMKVNMDATIFSNPDSMGVGCVMKDHAGLFVCAMAVSFAGAYIPEIAEGLAI 86

Query: 230 KEALSWIKGQRWNEVEVEADCLVAVQAIRSSVPMVSPFGYIIEECRNLLRELNTTSLFYV 409
           +EALSW + ++   V  E DCL  V+A+       S  G II++C+ L   ++  S  +V
Sbjct: 87  QEALSWARDRQLLNVVFELDCLHIVEALLRKGTDRSSLGLIIKDCKLLSSSISNCSFAFV 146

Query: 410 KRSAN 424
           KRS N
Sbjct: 147 KRSRN 151


>ref|XP_002532007.1| conserved hypothetical protein [Ricinus communis]
           gi|223528338|gb|EEF30380.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 273

 Score = 82.8 bits (203), Expect = 3e-14
 Identities = 43/125 (34%), Positives = 67/125 (53%)
 Frame = +2

Query: 50  IWVRPQLNSIKVSVDASVFKDADAFGLGILARDSDGVLVQAKSVRKQGTVDPVMAEAIAI 229
           IW  P    +K ++D  VF   +  G G + ++  G    A +    G +DP +AEA+++
Sbjct: 128 IWTCPVEGWLKCNIDVVVFVANNRLGFGFIFQNDSGTFRAATNGLISGPLDPQVAEALSL 187

Query: 230 KEALSWIKGQRWNEVEVEADCLVAVQAIRSSVPMVSPFGYIIEECRNLLRELNTTSLFYV 409
           +E L W+KG   N V  E+DCL  V A+       S FG +I +CR+ L+E+N   + +V
Sbjct: 188 REDLCWVKGLDLNYVVSESDCLTLVNAVNKVGVNSSLFGLLIGDCRSFLKEMNHAHIVFV 247

Query: 410 KRSAN 424
           KR  N
Sbjct: 248 KRFGN 252


>ref|XP_003598202.1| 60S ribosomal protein L23 [Medicago truncatula]
           gi|355487250|gb|AES68453.1| 60S ribosomal protein L23
           [Medicago truncatula]
          Length = 547

 Score = 82.4 bits (202), Expect = 3e-14
 Identities = 39/125 (31%), Positives = 71/125 (56%)
 Frame = +2

Query: 53  WVRPQLNSIKVSVDASVFKDADAFGLGILARDSDGVLVQAKSVRKQGTVDPVMAEAIAIK 232
           W  P    +K +VDA++F + + FG G+  RD  G  ++A +   +G   P  AEA+ ++
Sbjct: 57  WQPPAAGFLKCNVDAAIFSEQNRFGTGMCVRDQRGRFLKAATNWYEGCPPPQEAEAVGLR 116

Query: 233 EALSWIKGQRWNEVEVEADCLVAVQAIRSSVPMVSPFGYIIEECRNLLRELNTTSLFYVK 412
           +A+ W+     + V++E DC + V +I       + FG II++CR+LL++     + +V+
Sbjct: 117 DAILWLGQLELSNVQLELDCKLVVDSIYDKNNNQAEFGSIIDDCRSLLQQFTNFKISFVR 176

Query: 413 RSANM 427
           R AN+
Sbjct: 177 RQANV 181


>ref|XP_002522452.1| nucleic acid binding protein, putative [Ricinus communis]
           gi|223538337|gb|EEF39944.1| nucleic acid binding
           protein, putative [Ricinus communis]
          Length = 483

 Score = 79.3 bits (194), Expect = 3e-13
 Identities = 42/128 (32%), Positives = 71/128 (55%)
 Frame = +2

Query: 41  GADIWVRPQLNSIKVSVDASVFKDADAFGLGILARDSDGVLVQAKSVRKQGTVDPVMAEA 220
           G  +W +P     K++VDAS   +    G   + RD+ G+ +    + +    +P +AEA
Sbjct: 339 GDCLWQKPATGKYKLNVDASSSAERGKSGASFVLRDNAGIWITGVLIIRPYIANPDVAEA 398

Query: 221 IAIKEALSWIKGQRWNEVEVEADCLVAVQAIRSSVPMVSPFGYIIEECRNLLRELNTTSL 400
            A+KEALSWI  +   EV++E DCL  ++ +   +   S    ++++C++LLR LN  +L
Sbjct: 399 WALKEALSWIHAKGMEEVQIETDCLRNIELLEEELHPNSYLLCLLKDCQDLLRVLNRCNL 458

Query: 401 FYVKRSAN 424
            +V  SAN
Sbjct: 459 VFVYGSAN 466


>ref|XP_003635424.1| PREDICTED: LOW QUALITY PROTEIN: putative ribonuclease H protein
            At1g65750-like [Vitis vinifera]
          Length = 820

 Score = 76.3 bits (186), Expect = 2e-12
 Identities = 43/124 (34%), Positives = 67/124 (54%)
 Frame = +2

Query: 53   WVRPQLNSIKVSVDASVFKDADAFGLGILARDSDGVLVQAKSVRKQGTVDPVMAEAIAIK 232
            W +P    IK++VD +VF D  A  +G + RD  G  +   +        P + EA+ ++
Sbjct: 664  WQKPDYGWIKINVDGAVFPDKGA--IGAVFRDHQGRFMGGFAKPFPHQTLPKVVEALGVR 721

Query: 233  EALSWIKGQRWNEVEVEADCLVAVQAIRSSVPMVSPFGYIIEECRNLLRELNTTSLFYVK 412
            E LSWI  +  + + VE DCL  VQAI+      + FG+II +C ++L+ L    + Y +
Sbjct: 722  EVLSWIHERSRSRIVVETDCLRVVQAIQHKSCPNTSFGFIIVDCLDVLQHLVDVQVVYAR 781

Query: 413  RSAN 424
            RSAN
Sbjct: 782  RSAN 785