BLASTX nr result

ID: Bupleurum21_contig00028506 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00028506
         (576 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN81016.1| hypothetical protein VITISV_025518 [Vitis vinifera]   196   2e-48
emb|CAN63612.1| hypothetical protein VITISV_032683 [Vitis vinifera]   196   2e-48
emb|CAN81001.1| hypothetical protein VITISV_006992 [Vitis vinifera]   195   5e-48
emb|CAN83990.1| hypothetical protein VITISV_018454 [Vitis vinifera]   194   9e-48
gb|ABM05483.1| LTR retrotransposon-like protein [Rhodiola fastig...   194   9e-48

>emb|CAN81016.1| hypothetical protein VITISV_025518 [Vitis vinifera]
          Length = 1461

 Score =  196 bits (499), Expect = 2e-48
 Identities = 101/194 (52%), Positives = 134/194 (69%), Gaps = 2/194 (1%)
 Frame = +1

Query: 1    EEVYMDLPQGHALHGKA--VCRLNKSIYGLKQAAKEWFDKLADTLFALGFTQTKADYSLF 174
            EEVYM LP G    G+   VCRLNKS+YGLKQA++ WF K + T+   GF Q++ADYSLF
Sbjct: 1071 EEVYMQLPLGFRQQGETPMVCRLNKSLYGLKQASRSWFRKFSATIQQDGFHQSRADYSLF 1130

Query: 175  VYQSGASFVIALVYVDDILLTGTDSDFISFVKSILHQTFTIKDLGLIKYYLGLEVNKTAD 354
               SG SF   L+YVDD+++TG D + I+ +K  LH  F IKDLG ++Y+LG+EV ++ D
Sbjct: 1131 TKISGNSFTAVLIYVDDMIITGNDENVIAALKESLHTKFRIKDLGQLRYFLGIEVARSTD 1190

Query: 355  GIYIHQHKFIHDMLTEAGLEHCKPLSLPVDSNVKLSLHDGIPIDDPSLYRKYIGKLLYLT 534
            GI I Q K+  D+L EAGL   KPLS P++ N KL    G  + +PS YR+ +G+L+YLT
Sbjct: 1191 GISISQRKYTLDILDEAGLLGAKPLSTPMEENNKLLPTVGDLLKNPSTYRRLVGQLIYLT 1250

Query: 535  TTRPDIAYIVHHLS 576
             TRP+I+Y VH LS
Sbjct: 1251 ITRPEISYSVHILS 1264


>emb|CAN63612.1| hypothetical protein VITISV_032683 [Vitis vinifera]
          Length = 1159

 Score =  196 bits (498), Expect = 2e-48
 Identities = 94/190 (49%), Positives = 132/190 (69%), Gaps = 1/190 (0%)
 Frame = +1

Query: 1    EEVYMDLPQGHALHGKA-VCRLNKSIYGLKQAAKEWFDKLADTLFALGFTQTKADYSLFV 177
            EE+YM LP G        VC+L +S+YGLKQA + WF+K   T+ +  FTQ + DYSLF 
Sbjct: 887  EEIYMKLPFGMTNSSXHDVCKLKRSLYGLKQAPRAWFEKFRSTILSFSFTQIQYDYSLFF 946

Query: 178  YQSGASFVIALVYVDDILLTGTDSDFISFVKSILHQTFTIKDLGLIKYYLGLEVNKTADG 357
            + S +S V+ LVYVDDI++TGT+   I+ ++ +LH TF +KDL  + Y+LGLEV+  A G
Sbjct: 947  HTSVSSIVLLLVYVDDIIITGTBCSXITKLQQLLHATFHMKDLXQLTYFLGLEVHXRASG 1006

Query: 358  IYIHQHKFIHDMLTEAGLEHCKPLSLPVDSNVKLSLHDGIPIDDPSLYRKYIGKLLYLTT 537
            I+++QHK+I D++T AGLE    +  P++ NVK    +G  +DDP+LYR  +G L+YLTT
Sbjct: 1007 IFVNQHKYIQDLITLAGLEDTSSVDTPMEVNVKCRKDEGDLLDDPTLYRLLVGSLIYLTT 1066

Query: 538  TRPDIAYIVH 567
            TRPDI+Y VH
Sbjct: 1067 TRPDISYAVH 1076


>emb|CAN81001.1| hypothetical protein VITISV_006992 [Vitis vinifera]
          Length = 1131

 Score =  195 bits (495), Expect = 5e-48
 Identities = 99/194 (51%), Positives = 133/194 (68%), Gaps = 2/194 (1%)
 Frame = +1

Query: 1    EEVYMDLPQGHALHGKA--VCRLNKSIYGLKQAAKEWFDKLADTLFALGFTQTKADYSLF 174
            EEVYM LP G    G+   VCRLNKS+YGLKQA++ WF K + T+   GF Q+ ADYSLF
Sbjct: 741  EEVYMQLPPGFCRQGETLMVCRLNKSLYGLKQASRSWFQKFSATIQQNGFHQSMADYSLF 800

Query: 175  VYQSGASFVIALVYVDDILLTGTDSDFISFVKSILHQTFTIKDLGLIKYYLGLEVNKTAD 354
               SG SF++ L+YVDD+++TG D + I+ +K  LH  F IKDLG ++Y+LG+EV ++ D
Sbjct: 801  TKISGNSFIVVLIYVDDMIITGNDENVIAALKESLHTKFRIKDLGQLRYFLGIEVARSTD 860

Query: 355  GIYIHQHKFIHDMLTEAGLEHCKPLSLPVDSNVKLSLHDGIPIDDPSLYRKYIGKLLYLT 534
            GI I Q K+  D+L EAGL   KPL  P++ N KL    G  + +PS YR+ +G+L+YLT
Sbjct: 861  GILISQRKYTLDILDEAGLLGAKPLLTPMEENNKLLPTVGDLLKNPSTYRRLVGQLIYLT 920

Query: 535  TTRPDIAYIVHHLS 576
             TR +I+Y VH LS
Sbjct: 921  ITRXEISYSVHILS 934


>emb|CAN83990.1| hypothetical protein VITISV_018454 [Vitis vinifera]
          Length = 1243

 Score =  194 bits (493), Expect = 9e-48
 Identities = 93/197 (47%), Positives = 139/197 (70%), Gaps = 5/197 (2%)
 Frame = +1

Query: 1    EEVYMDLPQGH-----ALHGKAVCRLNKSIYGLKQAAKEWFDKLADTLFALGFTQTKADY 165
            EEVYM LP G+     +L   AVC L+KS+YGLKQA+++WF K +  +  LGF+Q+ +D+
Sbjct: 870  EEVYMKLPPGYNRKGESLPSNAVCLLHKSLYGLKQASRQWFSKFSTAIMGLGFSQSPSDH 929

Query: 166  SLFVYQSGASFVIALVYVDDILLTGTDSDFISFVKSILHQTFTIKDLGLIKYYLGLEVNK 345
            SLF+      F+  LVYVDD+++   +   I+ +KS L++ F +KDLG +KY+LGLE+ K
Sbjct: 930  SLFIKNVDGLFIALLVYVDDVIIASNNQGAIADLKSELNKLFKLKDLGDVKYFLGLEIAK 989

Query: 346  TADGIYIHQHKFIHDMLTEAGLEHCKPLSLPVDSNVKLSLHDGIPIDDPSLYRKYIGKLL 525
            ++ GI + Q K++ D+L++ G   CK  S P+++NVKLS+ +G+ + D SLYR+ +GKLL
Sbjct: 990  SSTGICVSQRKYVLDLLSDFGYLGCKAASTPMEANVKLSMDEGVDLPDVSLYRRLLGKLL 1049

Query: 526  YLTTTRPDIAYIVHHLS 576
            YLT TRPDI+Y+V  LS
Sbjct: 1050 YLTLTRPDISYVVGRLS 1066


>gb|ABM05483.1| LTR retrotransposon-like protein [Rhodiola fastigiata]
          Length = 383

 Score =  194 bits (493), Expect = 9e-48
 Identities = 93/195 (47%), Positives = 130/195 (66%), Gaps = 3/195 (1%)
 Frame = +1

Query: 1   EEVYMDLPQGHALHGKA---VCRLNKSIYGLKQAAKEWFDKLADTLFALGFTQTKADYSL 171
           +EVYM  P G     KA   VC+L KS+YGLKQA ++WF + +D L   GFT +  DYSL
Sbjct: 6   KEVYMSFPPGFYKEEKAQGKVCKLLKSLYGLKQAPRQWFSRFSDALIKFGFTSSLNDYSL 65

Query: 172 FVYQSGASFVIALVYVDDILLTGTDSDFISFVKSILHQTFTIKDLGLIKYYLGLEVNKTA 351
           F Y     F+  LVYVDD+++TGT    I  VKS +H  F IKDLG ++Y+LG E  ++ 
Sbjct: 66  FTYNKDGVFLALLVYVDDVIITGTSHSLIQSVKSYIHDLFRIKDLGQLRYFLGFEAARSD 125

Query: 352 DGIYIHQHKFIHDMLTEAGLEHCKPLSLPVDSNVKLSLHDGIPIDDPSLYRKYIGKLLYL 531
            G++++Q K+  D+++EAGL  CKP  +P+D+  KLSL     ++DP+ YR+ +G+L+YL
Sbjct: 126 AGLFLNQRKYALDLISEAGLLGCKPSKIPMDTKHKLSLSTSPLLEDPAPYRRLVGQLIYL 185

Query: 532 TTTRPDIAYIVHHLS 576
           T TRPD+AY VH LS
Sbjct: 186 TNTRPDLAYSVHILS 200


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