BLASTX nr result

ID: Bupleurum21_contig00028497 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00028497
         (339 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN71438.1| hypothetical protein VITISV_011330 [Vitis vinifera]   120   9e-26
gb|ABN07957.1| Polynucleotidyl transferase, Ribonuclease H fold ...   105   4e-21
gb|ABA96203.1| retrotransposon protein, putative, unclassified, ...   105   5e-21
ref|XP_002452062.1| hypothetical protein SORBIDRAFT_04g017846 [S...   105   5e-21
ref|XP_002468588.1| hypothetical protein SORBIDRAFT_01g048580 [S...   105   5e-21

>emb|CAN71438.1| hypothetical protein VITISV_011330 [Vitis vinifera]
          Length = 1484

 Score =  120 bits (302), Expect = 9e-26
 Identities = 56/107 (52%), Positives = 76/107 (71%)
 Frame = -2

Query: 335 RMSASKMKGGLGFRDLYGFNLAMLGKQVWNLLHKPNSLVARVFKARYYPSENILSASRNG 156
           ++   K +GGLGFR+   FNLAMLGKQ WNL+ KP+SL+AR+ KARYY S + LSA    
Sbjct: 364 KLCLRKEEGGLGFRNXRDFNLAMLGKQGWNLITKPDSLIARLLKARYYRSGDFLSARLGH 423

Query: 155 GSSFIWSGIWAAKEEIKKGFRWVMGDGKSINAFTDPWLKNKQNFVVE 15
             SF W GIW+++  + KG RW +GDG SI+ + +PWL++ +NF VE
Sbjct: 424 NPSFTWKGIWSSRAILLKGSRWRIGDGCSIDVWNNPWLRDAENFKVE 470


>gb|ABN07957.1| Polynucleotidyl transferase, Ribonuclease H fold [Medicago
           truncatula]
          Length = 380

 Score =  105 bits (262), Expect = 4e-21
 Identities = 41/101 (40%), Positives = 68/101 (67%)
 Frame = -2

Query: 338 QRMSASKMKGGLGFRDLYGFNLAMLGKQVWNLLHKPNSLVARVFKARYYPSENILSASRN 159
           +R+S  K  GG+GF+ L  FNLAM+GKQ W L+  P+SL+ ++ KA+Y+P  +  SAS  
Sbjct: 6   ERLSVPKTFGGMGFKSLRAFNLAMIGKQAWKLISNPDSLITKLLKAKYFPHSDYFSASIG 65

Query: 158 GGSSFIWSGIWAAKEEIKKGFRWVMGDGKSINAFTDPWLKN 36
              S++W  +W+ ++ +K G +W +G G++I+ +  PWLK+
Sbjct: 66  HNPSYVWRSLWSVRDYLKHGLKWSIGMGETISVWNQPWLKD 106


>gb|ABA96203.1| retrotransposon protein, putative, unclassified, expressed [Oryza
           sativa Japonica Group]
          Length = 1378

 Score =  105 bits (261), Expect = 5e-21
 Identities = 49/107 (45%), Positives = 65/107 (60%)
 Frame = -2

Query: 335 RMSASKMKGGLGFRDLYGFNLAMLGKQVWNLLHKPNSLVARVFKARYYPSENILSASRNG 156
           +M   K KGG+GFRDL  FNLA+L KQVW LL  P+SL ARV +ARYY    +L+A    
Sbjct: 307 KMCMPKGKGGMGFRDLQSFNLALLAKQVWRLLSDPDSLCARVLRARYYRDGKLLNARMKS 366

Query: 155 GSSFIWSGIWAAKEEIKKGFRWVMGDGKSINAFTDPWLKNKQNFVVE 15
           GSS+ W  I A  +  K+G+ W +GDG  I  + D W+    N  ++
Sbjct: 367 GSSYTWQSILAGLQCFKQGYIWRVGDGTQIKIWEDNWIPGSHNMKIQ 413


>ref|XP_002452062.1| hypothetical protein SORBIDRAFT_04g017846 [Sorghum bicolor]
           gi|241931893|gb|EES05038.1| hypothetical protein
           SORBIDRAFT_04g017846 [Sorghum bicolor]
          Length = 397

 Score =  105 bits (261), Expect = 5e-21
 Identities = 47/104 (45%), Positives = 68/104 (65%)
 Frame = -2

Query: 338 QRMSASKMKGGLGFRDLYGFNLAMLGKQVWNLLHKPNSLVARVFKARYYPSENILSASRN 159
           +++   K +GGLGFRD++ FN+AML KQ W LL +P SL ARV KA+Y+P+ ++L A   
Sbjct: 152 EQLLKPKEEGGLGFRDIHSFNMAMLAKQGWRLLKEPESLCARVLKAKYHPNGSVLDAQPR 211

Query: 158 GGSSFIWSGIWAAKEEIKKGFRWVMGDGKSINAFTDPWLKNKQN 27
            G S+ W  I    E +KKG  W +GDG  I+ ++DPWL   ++
Sbjct: 212 RGMSYSWRSILLGLEVVKKGMIWRVGDGAGIHIWSDPWLPRDES 255


>ref|XP_002468588.1| hypothetical protein SORBIDRAFT_01g048580 [Sorghum bicolor]
           gi|241922442|gb|EER95586.1| hypothetical protein
           SORBIDRAFT_01g048580 [Sorghum bicolor]
          Length = 517

 Score =  105 bits (261), Expect = 5e-21
 Identities = 45/99 (45%), Positives = 65/99 (65%)
 Frame = -2

Query: 338 QRMSASKMKGGLGFRDLYGFNLAMLGKQVWNLLHKPNSLVARVFKARYYPSENILSASRN 159
           ++++ SK +GGLGFRDLY FNLAML +Q W +L +P++L  RV KARY+P+ NIL     
Sbjct: 266 EKLTLSKKRGGLGFRDLYHFNLAMLARQAWRILIEPDTLCGRVLKARYFPNSNILQCKAR 325

Query: 158 GGSSFIWSGIWAAKEEIKKGFRWVMGDGKSINAFTDPWL 42
            G  + W  I      +K+G  W +G G ++N +TDPW+
Sbjct: 326 AGILYTWRSIIDGINLLKEGIIWRIGSGSNVNIWTDPWI 364


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