BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00028491
         (526 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN73347.1| hypothetical protein VITISV_037919 [Vitis vinifera]   145   5e-43
ref|XP_002512332.1| pentatricopeptide repeat-containing protein,...   141   3e-41
ref|XP_002272959.2| PREDICTED: uncharacterized protein LOC100251...   131   7e-39
emb|CBI25450.3| unnamed protein product [Vitis vinifera]              121   6e-36
ref|NP_191162.2| pentatricopeptide repeat-containing protein [Ar...   123   1e-32

>emb|CAN73347.1| hypothetical protein VITISV_037919 [Vitis vinifera]
          Length = 330

 Score =  145 bits (366), Expect(2) = 5e-43
 Identities = 69/103 (66%), Positives = 85/103 (82%)
 Frame = -1

Query: 394 DSRTYDALVLGACKAKRVDGGLVLLRRMVDDKISALYSTHIHIINALLKMGYYGQAVEFV 215
           D+RTYDALVLGACKA +V+G +V+LRRM DD +  LYSTH H+IN LLK+GYY QAVEFV
Sbjct: 209 DARTYDALVLGACKAGKVEGAMVVLRRMEDDGVPILYSTHAHVINGLLKLGYYAQAVEFV 268

Query: 214 LIYAGRDEAMDNECFGVLVRRLIGLKRFDEAKLVLEEMRSRGL 86
           +I  G+D+ +D E FG+L  RLI LKRF+EAKLVL+EMR RG+
Sbjct: 269 MICGGKDKKLDEESFGILGSRLINLKRFEEAKLVLKEMRRRGI 311



 Score = 54.3 bits (129), Expect(2) = 5e-43
 Identities = 22/41 (53%), Positives = 33/41 (80%)
 Frame = -2

Query: 522 MKEIKISPDVTSFNYILTAYCCDGNIIKAIEVVNEMDEQGL 400
           M+E  +SPDVT++NY+LTAYC  GN+  A+ V+ EM+E+G+
Sbjct: 166 MRESGVSPDVTAYNYLLTAYCFTGNLEAAVGVLTEMEEEGM 206


>ref|XP_002512332.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223548293|gb|EEF49784.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 619

 Score =  141 bits (356), Expect(2) = 3e-41
 Identities = 67/111 (60%), Positives = 87/111 (78%)
 Frame = -1

Query: 394 DSRTYDALVLGACKAKRVDGGLVLLRRMVDDKISALYSTHIHIINALLKMGYYGQAVEFV 215
           D+RTYDALVLGAC+  +V+  LV+LRRMVDD +  LYSTH+H+INALL++G Y QA +FV
Sbjct: 499 DARTYDALVLGACRTGKVEAALVVLRRMVDDGVHVLYSTHVHVINALLRLGCYVQATKFV 558

Query: 214 LIYAGRDEAMDNECFGVLVRRLIGLKRFDEAKLVLEEMRSRGLQIGKKFSE 62
           +I+ GRD A D E FG+L  +LI L+RF+EAKLVL+EM  RGL +G K  +
Sbjct: 559 MIFGGRDIAFDTEIFGILASKLIKLERFEEAKLVLKEMEERGLVMGDKLRD 609



 Score = 52.0 bits (123), Expect(2) = 3e-41
 Identities = 20/41 (48%), Positives = 33/41 (80%)
 Frame = -2

Query: 522 MKEIKISPDVTSFNYILTAYCCDGNIIKAIEVVNEMDEQGL 400
           M+ I + PD+T+FNY+LTAYC +GN++ A +V+  ++E+GL
Sbjct: 456 MRAIGVLPDLTAFNYLLTAYCYNGNLVDACKVMKRIEEEGL 496


>ref|XP_002272959.2| PREDICTED: uncharacterized protein LOC100251820 [Vitis vinifera]
          Length = 613

 Score =  131 bits (330), Expect(2) = 7e-39
 Identities = 62/93 (66%), Positives = 76/93 (81%)
 Frame = -1

Query: 394 DSRTYDALVLGACKAKRVDGGLVLLRRMVDDKISALYSTHIHIINALLKMGYYGQAVEFV 215
           D+RTYDALVLGACKA +V+G +V+LRRM DD +  LYSTH H+IN LLK+GYY QAVEFV
Sbjct: 209 DARTYDALVLGACKAGKVEGAMVVLRRMEDDGVPILYSTHAHVINGLLKLGYYAQAVEFV 268

Query: 214 LIYAGRDEAMDNECFGVLVRRLIGLKRFDEAKL 116
           +I  G+D+ +D E FG+L  RLI LKRF+EAKL
Sbjct: 269 MICGGKDKKLDEESFGILGSRLINLKRFEEAKL 301



 Score = 54.3 bits (129), Expect(2) = 7e-39
 Identities = 22/41 (53%), Positives = 33/41 (80%)
 Frame = -2

Query: 522 MKEIKISPDVTSFNYILTAYCCDGNIIKAIEVVNEMDEQGL 400
           M+E  +SPDVT++NY+LTAYC  GN+  A+ V+ EM+E+G+
Sbjct: 166 MRESGVSPDVTAYNYLLTAYCFTGNLEAAVGVLTEMEEEGM 206


>emb|CBI25450.3| unnamed protein product [Vitis vinifera]
          Length = 527

 Score =  121 bits (304), Expect(2) = 6e-36
 Identities = 57/87 (65%), Positives = 70/87 (80%)
 Frame = -1

Query: 394 DSRTYDALVLGACKAKRVDGGLVLLRRMVDDKISALYSTHIHIINALLKMGYYGQAVEFV 215
           D+RTYDALVLGACKA +V+G +V+LRRM DD +  LYSTH H+IN LLK+GYY QAVEFV
Sbjct: 209 DARTYDALVLGACKAGKVEGAMVVLRRMEDDGVPILYSTHAHVINGLLKLGYYAQAVEFV 268

Query: 214 LIYAGRDEAMDNECFGVLVRRLIGLKR 134
           +I  G+D+ +D E FG+L  RLI LKR
Sbjct: 269 MICGGKDKKLDEESFGILGSRLINLKR 295



 Score = 54.3 bits (129), Expect(2) = 6e-36
 Identities = 22/41 (53%), Positives = 33/41 (80%)
 Frame = -2

Query: 522 MKEIKISPDVTSFNYILTAYCCDGNIIKAIEVVNEMDEQGL 400
           M+E  +SPDVT++NY+LTAYC  GN+  A+ V+ EM+E+G+
Sbjct: 166 MRESGVSPDVTAYNYLLTAYCFTGNLEAAVGVLTEMEEEGM 206


>ref|NP_191162.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|218546756|sp|Q9LY43.2|PP283_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At3g56030 gi|332645947|gb|AEE79468.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 351

 Score =  123 bits (309), Expect(2) = 1e-32
 Identities = 58/111 (52%), Positives = 81/111 (72%)
 Frame = -1

Query: 394 DSRTYDALVLGACKAKRVDGGLVLLRRMVDDKISALYSTHIHIINALLKMGYYGQAVEFV 215
           D+RTYDALVLGACK+ RV+  + +LRRM ++ +S LY+TH H+I  +++ GYY  +VEFV
Sbjct: 232 DTRTYDALVLGACKSGRVEAAMAILRRMEEEGLSVLYATHAHVIGEMVESGYYALSVEFV 291

Query: 214 LIYAGRDEAMDNECFGVLVRRLIGLKRFDEAKLVLEEMRSRGLQIGKKFSE 62
           + YAG+D+ +D E  G L  +LI  KRF EAK+VL+EM  RGL++G    E
Sbjct: 292 MAYAGKDKRLDEENLGSLASKLIKRKRFKEAKMVLKEMSVRGLRMGDALRE 342



 Score = 41.6 bits (96), Expect(2) = 1e-32
 Identities = 17/39 (43%), Positives = 28/39 (71%)
 Frame = -2

Query: 522 MKEIKISPDVTSFNYILTAYCCDGNIIKAIEVVNEMDEQ 406
           M+   I  DVTS+NY LT++C DG++ +A  V+ +M+E+
Sbjct: 186 MRSHAIPVDVTSYNYFLTSHCYDGDVAEASRVLRKMEEE 224