BLASTX nr result

ID: Bupleurum21_contig00028473 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00028473
         (561 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002327911.1| predicted protein [Populus trichocarpa] gi|2...   121   9e-26
emb|CBI21881.3| unnamed protein product [Vitis vinifera]              119   4e-25
ref|XP_002274918.1| PREDICTED: uncharacterized protein LOC100262...   119   4e-25
emb|CAN78517.1| hypothetical protein VITISV_039749 [Vitis vinifera]   119   4e-25
ref|XP_002310406.1| predicted protein [Populus trichocarpa] gi|2...   114   1e-23

>ref|XP_002327911.1| predicted protein [Populus trichocarpa] gi|222837320|gb|EEE75699.1|
           predicted protein [Populus trichocarpa]
          Length = 811

 Score =  121 bits (303), Expect = 9e-26
 Identities = 69/188 (36%), Positives = 106/188 (56%), Gaps = 3/188 (1%)
 Frame = -3

Query: 556 RKAELWFKTTLSYAPSPFMPKIKTSRTLQLDSLCDFSEAEQLNKVPDSLEPTTTTRHETA 377
           R AELWF  T SYAPSPFMP+IKT R+ ++++LCDFS+A+Q +KV +S +   +     +
Sbjct: 48  RNAELWFDVTASYAPSPFMPRIKTGRSFKVETLCDFSQADQFHKVAESSDSKASDSSSQS 107

Query: 376 PIPTLDIEQTIPQHDANEEVDSNRSKEAESSTLPKLVNGDEMTFKATETL---CIQENES 206
            +     E   P     EE  S+   +  ++ L  +++  E+T +  + +   C + NE 
Sbjct: 108 EVMPPPAEAAAPIGTGKEEKTSDEDNKENNANLVNVISAGEVTCEKEKKVGFACAEGNER 167

Query: 205 VKAKGPSPFANVVIETQLSNSKGPEACTPKPQISQKSNLLQTDSKKQLTARKIASMVKNP 26
             +   +  A+        +SK    CTPKP +S ++    TDSKK  +AR IAS+V+NP
Sbjct: 168 STSSLQTENAD-----GKESSKNEAYCTPKPPMSSRNRGPLTDSKKNHSARHIASLVRNP 222

Query: 25  SLLKSKTQ 2
           SLLK K+Q
Sbjct: 223 SLLKPKSQ 230


>emb|CBI21881.3| unnamed protein product [Vitis vinifera]
          Length = 821

 Score =  119 bits (297), Expect = 4e-25
 Identities = 88/222 (39%), Positives = 115/222 (51%), Gaps = 39/222 (17%)
 Frame = -3

Query: 556 RKAELWFKTTLSYAPSPFMPKIKTSRTLQLDS-LCDFSEAEQ-LNKVPDSLEPTTTT-RH 386
           R AELWF T +S+APSPFMP+IKT R++  +S LCDFSEA+Q   KV  S + T T    
Sbjct: 33  RNAELWFDTAISHAPSPFMPRIKTGRSVVTESLLCDFSEADQPQKKVSQSADSTVTNCAS 92

Query: 385 ETAPIPTLDIEQTIPQHDANEEVDSNRSKEAESSTLPKLVNGDEMTFKATET--LCIQEN 212
           ET P       + +P     EE+  N +KE  +++L  LV+ DE   K  +   +C  EN
Sbjct: 93  ETKP-----QSEMMPAEIKEEELTPNEAKEENNASLVNLVSADEEATKDKDKGGVCTLEN 147

Query: 211 ESVKAKGPS-----------PFANVVIETQLSNSK----------------------GPE 131
            S   +G S              ++ +ET+    K                      G E
Sbjct: 148 GSDSTEGASSAVERKTNDNKSLLSLQVETEACTPKQPTISHKENQTDLKNLKAEKIRGTE 207

Query: 130 ACTPKPQI-SQKSNLLQTDSKKQLTARKIASMVKNPSLLKSK 8
           ACTPKP + SQ +NL  TDSKK  TA+KIAS+VKNPS LK K
Sbjct: 208 ACTPKPPMTSQNANL--TDSKKHQTAKKIASLVKNPSALKPK 247


>ref|XP_002274918.1| PREDICTED: uncharacterized protein LOC100262517 [Vitis vinifera]
          Length = 805

 Score =  119 bits (297), Expect = 4e-25
 Identities = 88/222 (39%), Positives = 115/222 (51%), Gaps = 39/222 (17%)
 Frame = -3

Query: 556 RKAELWFKTTLSYAPSPFMPKIKTSRTLQLDS-LCDFSEAEQ-LNKVPDSLEPTTTT-RH 386
           R AELWF T +S+APSPFMP+IKT R++  +S LCDFSEA+Q   KV  S + T T    
Sbjct: 33  RNAELWFDTAISHAPSPFMPRIKTGRSVVTESLLCDFSEADQPQKKVSQSADSTVTNCAS 92

Query: 385 ETAPIPTLDIEQTIPQHDANEEVDSNRSKEAESSTLPKLVNGDEMTFKATET--LCIQEN 212
           ET P       + +P     EE+  N +KE  +++L  LV+ DE   K  +   +C  EN
Sbjct: 93  ETKP-----QSEMMPAEIKEEELTPNEAKEENNASLVNLVSADEEATKDKDKGGVCTLEN 147

Query: 211 ESVKAKGPS-----------PFANVVIETQLSNSK----------------------GPE 131
            S   +G S              ++ +ET+    K                      G E
Sbjct: 148 GSDSTEGASSAVERKTNDNKSLLSLQVETEACTPKQPTISHKENQTDLKNLKAEKIRGTE 207

Query: 130 ACTPKPQI-SQKSNLLQTDSKKQLTARKIASMVKNPSLLKSK 8
           ACTPKP + SQ +NL  TDSKK  TA+KIAS+VKNPS LK K
Sbjct: 208 ACTPKPPMTSQNANL--TDSKKHQTAKKIASLVKNPSALKPK 247


>emb|CAN78517.1| hypothetical protein VITISV_039749 [Vitis vinifera]
          Length = 941

 Score =  119 bits (297), Expect = 4e-25
 Identities = 88/222 (39%), Positives = 115/222 (51%), Gaps = 39/222 (17%)
 Frame = -3

Query: 556 RKAELWFKTTLSYAPSPFMPKIKTSRTLQLDS-LCDFSEAEQ-LNKVPDSLEPTTTT-RH 386
           R AELWF T +S+APSPFMP+IKT R++  +S LCDFSEA+Q   KV  S + T T    
Sbjct: 33  RNAELWFDTAISHAPSPFMPRIKTGRSVVTESLLCDFSEADQPQKKVSQSADSTVTNCAS 92

Query: 385 ETAPIPTLDIEQTIPQHDANEEVDSNRSKEAESSTLPKLVNGDEMTFKATET--LCIQEN 212
           ET P       + +P     EE+  N +KE  +++L  LV+ DE   K  +   +C  EN
Sbjct: 93  ETKP-----QSEMMPAEIKEEELTPNEAKEENNASLVNLVSADEEATKDKDKGGVCTLEN 147

Query: 211 ESVKAKGPS-----------PFANVVIETQLSNSK----------------------GPE 131
            S   +G S              ++ +ET+    K                      G E
Sbjct: 148 GSDSTEGASSAVERKTNDNKSLLSLQVETEACTPKQPTISHKENQTDLKNLKAEKIRGTE 207

Query: 130 ACTPKPQI-SQKSNLLQTDSKKQLTARKIASMVKNPSLLKSK 8
           ACTPKP + SQ +NL  TDSKK  TA+KIAS+VKNPS LK K
Sbjct: 208 ACTPKPPMTSQNANL--TDSKKHQTAKKIASLVKNPSALKPK 247


>ref|XP_002310406.1| predicted protein [Populus trichocarpa] gi|222853309|gb|EEE90856.1|
           predicted protein [Populus trichocarpa]
          Length = 833

 Score =  114 bits (284), Expect = 1e-23
 Identities = 67/187 (35%), Positives = 107/187 (57%), Gaps = 2/187 (1%)
 Frame = -3

Query: 556 RKAELWFKTTLSYAPSPFMPKIKTSRTLQLDSLCDFSEAEQLNKVPDSLE--PTTTTRHE 383
           R AELWF  T +YAPSPFMP+IKT R+ ++++LCDFS+A+QL+KV +S +  PT ++   
Sbjct: 62  RNAELWFDVTAAYAPSPFMPRIKTGRSFKVETLCDFSQADQLHKVAESSDSKPTDSSSDS 121

Query: 382 TAPIPTLDIEQTIPQHDANEEVDSNRSKEAESSTLPKLVNGDEMTFKATETLCIQENESV 203
            +    + + +     +  +E  S  S E  ++ L  +++  ++T +  + +     ES 
Sbjct: 122 NSQSEVMPLPEPAASSEMRKEETS--SNEENNANLINVISAGDVTCEKEKKVGFACAES- 178

Query: 202 KAKGPSPFANVVIETQLSNSKGPEACTPKPQISQKSNLLQTDSKKQLTARKIASMVKNPS 23
              G    +  +  T   +SK    CTPK  +S ++  + TDSKK  +AR IAS+VKNPS
Sbjct: 179 --NGRCTSSLQIENTDGKSSKNDAYCTPKQPMSSRNRGILTDSKKNQSARHIASLVKNPS 236

Query: 22  LLKSKTQ 2
            +K K Q
Sbjct: 237 SVKPKGQ 243


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