BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00028472
         (1351 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279122.1| PREDICTED: F-box protein At3g07870 [Vitis vi...   379   e-102
ref|XP_002301588.1| f-box family protein [Populus trichocarpa] g...   367   3e-99
ref|XP_002320506.1| f-box family protein [Populus trichocarpa] g...   355   2e-95
ref|NP_566322.1| F-box protein [Arabidopsis thaliana] gi|7526578...   325   2e-86
ref|XP_002882554.1| F-box family protein [Arabidopsis lyrata sub...   325   2e-86

>ref|XP_002279122.1| PREDICTED: F-box protein At3g07870 [Vitis vinifera]
            gi|147785390|emb|CAN68678.1| hypothetical protein
            VITISV_041941 [Vitis vinifera]
          Length = 409

 Score =  379 bits (972), Expect = e-102
 Identities = 200/411 (48%), Positives = 273/411 (66%), Gaps = 9/411 (2%)
 Frame = +3

Query: 84   NMEKPSKKQEDEKRNG-------IYSLPHELALDIFSRLSIISVLQSRFVCKSWHNLTLE 242
            + EKP K+   E   G       +  LP ++ LDI SRL + S++Q RFVC+ W  +  +
Sbjct: 4    DFEKPGKRARYEMGGGEGPRTSFMERLPRDIILDILSRLPVTSLVQFRFVCRGWRLMAQD 63

Query: 243  QNLVNMHFSQVAKRNPMLIFHSDYPIRNELCFAEFSSDADERGIVKKLSTPFSASMPEFI 422
              L + H  + A+ NP LI H DYPIRN++ F + S+++ ++ +V+KL+ PF ASMPEF 
Sbjct: 64   SLLASKHLCRTAQYNPCLILHCDYPIRNQISFVDISAESRDKDMVRKLTIPFWASMPEFE 123

Query: 423  VVGSCNGLLCLSDSLYKDDMFVYNPFTRDYKALPKTRRYEEEAVVCGFGYHAGTKEYKVV 602
            VVGSCNGLLCL+DSL+KD ++V+NPFTRD+K LPK+ +Y ++ VV GFGYH  T+ YKVV
Sbjct: 124  VVGSCNGLLCLADSLFKDAVYVHNPFTRDFKQLPKSLQYPDQEVVFGFGYHPMTEVYKVV 183

Query: 603  KIVHHWILNFADQY--VRRFRMPGTSKSEVFVFTLGGNTWRNVGQAPYYFERRSSEALYT 776
            K+V+     + + Y    RFR    S+SEV V TLG  TWR++G+  Y  +R  SEAL  
Sbjct: 184  KVVY-----YRNGYGGFSRFRRITCSQSEVQVLTLGSPTWRSLGKVSYQLDRWPSEAL-V 237

Query: 777  NGRVHWVTRGLHNNIRGLIIISFDLEEEKFIEIPRPDFSVADGRNYHLAILKGCLSAVIV 956
            NGR+HWVTR      R   I+SFDL +E+F EIP+PD       NYHL +L GCLSA + 
Sbjct: 238  NGRLHWVTRPRRYVTR--FIVSFDLADEQFREIPKPDCGGLSRCNYHLLVLGGCLSAAVH 295

Query: 957  RYGLRRDIEIWVMKEYNVKESWIKEFNFRGYVPQPPFRKLLRPVRIWRNNISRGKLRVLC 1136
            R   +  +E+WVMKEY+VKESWIKEFN   ++P+   + + RP RIWRN      +R+LC
Sbjct: 296  RSNGK--LEVWVMKEYDVKESWIKEFNIGAHLPKGLKQDVNRPHRIWRNAPKGRGVRLLC 353

Query: 1137 ILENGQILIEYKTGRLVVYDLGTGTYKDITFKGMPTMFQTVVHMGSLNQID 1289
            +L+NG+IL+EYK   LV Y+   G +KD+T KG+P  FQT VH+GSL+ ID
Sbjct: 354  LLKNGEILLEYKGRVLVSYNPERGKFKDLTLKGLPNWFQTFVHVGSLSWID 404


>ref|XP_002301588.1| f-box family protein [Populus trichocarpa]
            gi|222843314|gb|EEE80861.1| f-box family protein [Populus
            trichocarpa]
          Length = 408

 Score =  367 bits (943), Expect = 3e-99
 Identities = 189/403 (46%), Positives = 272/403 (67%), Gaps = 2/403 (0%)
 Frame = +3

Query: 93   KPSKKQEDEKRNGIYSLPHELALDIFSRLSIISVLQSRFVCKSWHNLTLEQNLVNMHFS- 269
            + +K ++D +  G+  LP E+A DI SRL I S+++ + VC++W  + L+  +VN++ S 
Sbjct: 12   RKTKLEDDPQTTGMELLPREIAQDILSRLPITSLVKFKCVCRAWRAMALDPEVVNLYLSC 71

Query: 270  QVAKRNPMLIFHSDYPIRNELCFAEFSSDADERGIVKKLSTPFSASMPEFIVVGSCNGLL 449
               + +P +I H D+PIRN L F +F++  +E+  VK++  PFS+ MPEF VVGSCNGLL
Sbjct: 72   STQETDPCVILHCDFPIRNNLYFVDFAAHEEEKEKVKRIRAPFSSMMPEFEVVGSCNGLL 131

Query: 450  CLSDSLYKDDMFVYNPFTRDYKALPKTRRYEEEAVVCGFGYHAGTKEYKVVKIVHHWILN 629
            CLSDSL+ D +++YNPFT  YK LPK+ +Y ++ VV GFG++  T EYKV++IV++   N
Sbjct: 132  CLSDSLFNDSLYIYNPFTGRYKELPKSLQYPDQEVVFGFGFNPKTNEYKVIRIVYY--RN 189

Query: 630  FADQYVRRFRMPGTSKSEVFVFTLGGNTWRNVGQAPYYFERRSSEALYTNGRVHWVTRGL 809
               +Y R  R+     S+V + TLG   WR++G+  Y   RR+SE L  NGR+HWV+R  
Sbjct: 190  GHGRYPRSRRII-YPLSQVQILTLGCPGWRSLGKVSYRLVRRASETL-VNGRLHWVSRPC 247

Query: 810  HNNIRGLIIISFDLEEEKFIEIPRPDFSVADGRNYHLAILKGCLS-AVIVRYGLRRDIEI 986
             N      ++SFDL +E+F E+P+PD    +  +YHLA+L+GCLS AV   YG    +EI
Sbjct: 248  RNK-PARRLVSFDLTDEQFREVPKPDCGGLNRCDYHLAVLRGCLSVAVYCNYG---RLEI 303

Query: 987  WVMKEYNVKESWIKEFNFRGYVPQPPFRKLLRPVRIWRNNISRGKLRVLCILENGQILIE 1166
            WVMKEYNVKESW+KE+N   Y+P+   + L+RP++IW+N  +   +R LC+L+NG+IL+E
Sbjct: 304  WVMKEYNVKESWVKEYNIGAYMPKGLKQNLVRPLKIWKNASNGRAVRALCVLKNGEILLE 363

Query: 1167 YKTGRLVVYDLGTGTYKDITFKGMPTMFQTVVHMGSLNQIDLP 1295
            YK   LV YD   G +KDI  +G P  FQTVVH+GSLN ID P
Sbjct: 364  YKNRALVSYDPKKGKFKDIDLQGTPKWFQTVVHVGSLNWIDTP 406


>ref|XP_002320506.1| f-box family protein [Populus trichocarpa]
            gi|222861279|gb|EEE98821.1| f-box family protein [Populus
            trichocarpa]
          Length = 422

 Score =  355 bits (910), Expect = 2e-95
 Identities = 188/404 (46%), Positives = 264/404 (65%), Gaps = 3/404 (0%)
 Frame = +3

Query: 93   KPSKKQEDEKRNGIYSLPHELALDIFSRLSIISVLQSRFVCKSWHNLTLEQNLVNMHFSQ 272
            + +K + D +  G+  LP E+A DI SRL I S++Q + VC++W  L  +  LV+++ S 
Sbjct: 12   RKTKVEYDPQTTGMELLPREIAHDILSRLPITSLVQFKCVCRAWRALVQDPQLVDLYLSC 71

Query: 273  VAKR--NPMLIFHSDYPIRNELCFAEFSSDADERGIVKKLSTPFSASMPEFIVVGSCNGL 446
              +   +P LI H D+PIRN L F +F++  +E+  VK++  PFS+ MPEF VVGSCNGL
Sbjct: 72   STQDTDHPCLILHCDFPIRNNLYFVDFAAHEEEKEKVKRIPAPFSSMMPEFEVVGSCNGL 131

Query: 447  LCLSDSLYKDDMFVYNPFTRDYKALPKTRRYEEEAVVCGFGYHAGTKEYKVVKIVHHWIL 626
            LCLSDSLY D +++YNPFT  YK LPK+ +Y ++ VV GFG++  TKEYKV++IV++   
Sbjct: 132  LCLSDSLYNDSLYIYNPFTGCYKELPKSLQYPDQEVVSGFGFNPKTKEYKVIRIVYYRNG 191

Query: 627  NFADQYVRRFRMPGTSKSEVFVFTLGGNTWRNVGQAPYYFERRSSEALYTNGRVHWVTRG 806
            +      RR   P    SEV + TLG   WR++G+  Y   RR+S AL  NGR+HW++R 
Sbjct: 192  HGGYPRSRRIIYP---LSEVQILTLGCPEWRSLGKVSYRLVRRASGAL-VNGRLHWISRP 247

Query: 807  LHNNIRGLIIISFDLEEEKFIEIPRPDFSVADGRNYHLAILKGCLS-AVIVRYGLRRDIE 983
              N      ++SFDL +E+F E+ +PD    +  NYHL +L+GCLS AV   YG    +E
Sbjct: 248  CRNK-PARRLVSFDLTDEQFREVSKPDCGGLNRCNYHLVVLRGCLSAAVYCNYG---RLE 303

Query: 984  IWVMKEYNVKESWIKEFNFRGYVPQPPFRKLLRPVRIWRNNISRGKLRVLCILENGQILI 1163
            IWVMKEYNVKESW+KE+N   Y+P+   +   R ++IW+N+ +   +  LC+L+NG+IL+
Sbjct: 304  IWVMKEYNVKESWVKEYNIGAYMPKGLKQNQDRQLKIWKNSSNGRVVGALCVLKNGEILL 363

Query: 1164 EYKTGRLVVYDLGTGTYKDITFKGMPTMFQTVVHMGSLNQIDLP 1295
            EYK   LV YD   G +KDI  +G P  FQTVVH+GSLN ID P
Sbjct: 364  EYKNRVLVSYDPKNGKFKDIELQGAPNWFQTVVHVGSLNWIDTP 407


>ref|NP_566322.1| F-box protein [Arabidopsis thaliana]
            gi|75265789|sp|Q9SFC7.1|FB135_ARATH RecName: Full=F-box
            protein At3g07870 gi|6648199|gb|AAF21197.1|AC013483_21
            unknown protein [Arabidopsis thaliana]
            gi|15983479|gb|AAL11607.1|AF424614_1 AT3g07870/F17A17_21
            [Arabidopsis thaliana] gi|109134141|gb|ABG25068.1|
            At3g07870 [Arabidopsis thaliana]
            gi|332641092|gb|AEE74613.1| F-box protein [Arabidopsis
            thaliana]
          Length = 417

 Score =  325 bits (833), Expect = 2e-86
 Identities = 183/400 (45%), Positives = 256/400 (64%), Gaps = 8/400 (2%)
 Frame = +3

Query: 129  GIYSLPHELALDIFSRLSIISVLQSRFVCKSWHNLTLEQNLVNMHFSQVAKRNPMLIFHS 308
            G+ SLP ++  DIFSRL I S+ +  FVC+SW ++  +   ++   S   K  P L+ H 
Sbjct: 24   GLESLPEDIIADIFSRLPISSIARLMFVCRSWRSVLTQHGRLSSSSSSPTK--PCLLLHC 81

Query: 309  DYPIRNELCFAEFSSDADERGIVKKLSTPFSASMPEFIVVGSCNGLLCLSDSLYKDDMFV 488
            D PIRN L F + S + ++R   KK +  F++SMPEF VVGSCNGLLCLSDSLY D +++
Sbjct: 82   DSPIRNGLHFLDLSEE-EKRIKTKKFTLRFASSMPEFDVVGSCNGLLCLSDSLYNDSLYL 140

Query: 489  YNPFTRDYKALPK-TRRYEEEAVVCGFGYHAGTKEYKVVKIVHHWILNFADQYVRRFRMP 665
            YNPFT +   LP+ + +Y ++ +V GFG+H  TKEYKV+KIV+    +  +  + R R  
Sbjct: 141  YNPFTTNSLELPECSNKYHDQELVFGFGFHEMTKEYKVLKIVYFRGSSSNNNGIYRGRGR 200

Query: 666  GTSK-SEVFVFTLGGNT------WRNVGQAPYYFERRSSEALYTNGRVHWVTRGLHNNIR 824
               K SEV + TL   T      WR++G+APY F +RSSEAL  NGR+H+VTR    ++ 
Sbjct: 201  IQYKQSEVQILTLSSKTTDQSLSWRSLGKAPYKFVKRSSEAL-VNGRLHFVTRP-RRHVP 258

Query: 825  GLIIISFDLEEEKFIEIPRPDFSVADGRNYHLAILKGCLSAVIVRYGLRRDIEIWVMKEY 1004
                +SFDLE+E+F EIP+PD    +  N+ L  LKGCL AV+  YG    ++IWVMK Y
Sbjct: 259  DRKFVSFDLEDEEFKEIPKPDCGGLNRTNHRLVNLKGCLCAVV--YGNYGKLDIWVMKTY 316

Query: 1005 NVKESWIKEFNFRGYVPQPPFRKLLRPVRIWRNNISRGKLRVLCILENGQILIEYKTGRL 1184
             VKESW KE++   Y+P+   + L RP+ IW+N  +   +RVLC+LENG+IL+EYK+  L
Sbjct: 317  GVKESWGKEYSIGTYLPKGLKQNLDRPMWIWKNAENGKVVRVLCLLENGEILLEYKSRVL 376

Query: 1185 VVYDLGTGTYKDITFKGMPTMFQTVVHMGSLNQIDLPIHM 1304
            V YD   G +KD+ F G+P  F TVVH G+L+  D P+ +
Sbjct: 377  VAYDPKLGKFKDLLFHGLPNWFHTVVHAGTLSWFDTPLDL 416


>ref|XP_002882554.1| F-box family protein [Arabidopsis lyrata subsp. lyrata]
            gi|297328394|gb|EFH58813.1| F-box family protein
            [Arabidopsis lyrata subsp. lyrata]
          Length = 415

 Score =  325 bits (832), Expect = 2e-86
 Identities = 181/400 (45%), Positives = 258/400 (64%), Gaps = 8/400 (2%)
 Frame = +3

Query: 129  GIYSLPHELALDIFSRLSIISVLQSRFVCKSWHNLTLEQNLVNMHFSQVAKRNPMLIFHS 308
            G+ SLP ++  DIFSRL I S+ +  FVC+SW ++  +   V+   S  +   P L+ H 
Sbjct: 23   GLESLPGDIIADIFSRLPISSIARLMFVCRSWRSILTQHGRVS---SSSSPTKPCLLLHC 79

Query: 309  DYPIRNELCFAEFSSDADERGIVKKLSTPFSASMPEFIVVGSCNGLLCLSDSLYKDDMFV 488
            D PIRN L F + S + ++R   KK +  F +SMPEF VVGSCNGLLCLSDSLY D +++
Sbjct: 80   DSPIRNGLHFLDLSEE-EKRIKTKKFTLRFESSMPEFDVVGSCNGLLCLSDSLYNDSLYL 138

Query: 489  YNPFTRDYKALPK-TRRYEEEAVVCGFGYHAGTKEYKVVKIVHHWILNFADQYVRRFRMP 665
            YNPFT +   LP+ + +Y ++ +V GFG+H  TK+YKV+KIV+    + ++  + R R  
Sbjct: 139  YNPFTTNSLELPECSNKYHDQELVFGFGFHEMTKDYKVLKIVYFRGSSSSNNGIYRGRGR 198

Query: 666  GTSK-SEVFVFTLGGNT------WRNVGQAPYYFERRSSEALYTNGRVHWVTRGLHNNIR 824
               K SEV + TL   T      WR++G+APY F +RSSEAL  NGR+H+VTR    ++ 
Sbjct: 199  IQYKQSEVQILTLSSKTTDQSLSWRSLGKAPYKFMKRSSEAL-VNGRLHFVTRP-RRHVP 256

Query: 825  GLIIISFDLEEEKFIEIPRPDFSVADGRNYHLAILKGCLSAVIVRYGLRRDIEIWVMKEY 1004
                +SFDLE+E+F EIP+PD    +  N+ L  LKGCL AV+  YG    ++IWVM+ Y
Sbjct: 257  DRKFVSFDLEDEEFKEIPKPDCGGLNRTNHRLVNLKGCLCAVV--YGNYGKLDIWVMETY 314

Query: 1005 NVKESWIKEFNFRGYVPQPPFRKLLRPVRIWRNNISRGKLRVLCILENGQILIEYKTGRL 1184
             VKESW KE++   Y+P+   + L RP+ IW+N  +   +RVLC+LENG+IL+EYK+  L
Sbjct: 315  GVKESWGKEYSIGTYLPKGLKQNLDRPMWIWKNAENGKVVRVLCLLENGEILLEYKSRVL 374

Query: 1185 VVYDLGTGTYKDITFKGMPTMFQTVVHMGSLNQIDLPIHM 1304
            V YD   G +KD+ F G+P  F TVVH+G+L+ +D P+ +
Sbjct: 375  VAYDPKLGKFKDLLFHGLPNWFHTVVHVGTLSWVDTPLDL 414