BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00028446
         (785 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAC95175.1| putative non-LTR retroelement reverse transcripta...   226   3e-57
gb|AAF98181.1|AC000107_4 F17F8.5 [Arabidopsis thaliana]               209   4e-52
gb|AAG50886.1|AC025294_24 hypothetical protein [Arabidopsis thal...   203   4e-50
dbj|BAB09379.1| non-LTR retroelement reverse transcriptase-like ...   201   2e-49
dbj|BAB01344.1| reverse transcriptase-like protein [Arabidopsis ...   198   1e-48

>gb|AAC95175.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1352

 Score =  226 bits (577), Expect = 3e-57
 Identities = 113/261 (43%), Positives = 165/261 (63%), Gaps = 3/261 (1%)
 Frame = +1

Query: 1    PLCKNIDLTHIIFADDVLLFSHGDSNSVAAMMEGVSKFTNMSGLHLNMQKSSIYFGNISP 180
            P C+N++LTH+ FADD+++FS G S S+   +    KF  MS L ++++KS+I+   ISP
Sbjct: 838  PRCRNMNLTHLCFADDIMVFSDGTSKSIQGTLAIFEKFAAMSWLKISLEKSTIFMAGISP 897

Query: 181  PVGTQILGLTGLNVGTLPMTYLGLPLISARLTRSICSPLVMKLCARINSWTNRFLSFAGR 360
               T IL      +GTLP+ YLGLPL++ R+T+S   PLV K+ ARI SWTNRFLSFAGR
Sbjct: 898  NAKTSILQQFPFELGTLPVKYLGLPLLTKRMTQSDYLPLVEKIRARITSWTNRFLSFAGR 957

Query: 361  LRLIKSILSGIQGYWSMYMFLPRNVLNQIKGMFSKFLWGGPSPDKTHYKVSWKVCCLSIE 540
            L+LIKS+LS I  +W     LP+  L +I+ MFS FLW GP  +    K++W   C   E
Sbjct: 958  LQLIKSVLSSITNFWLSVFRLPKACLQEIEKMFSAFLWSGPDLNTKKAKIAWSEVCKLKE 1017

Query: 541  EGGLGIRDIICWNDAAIIYQLWRIVTNQKSLWIQWFRMFIIKSKSIWEIKPNAS-ASWCV 717
            EGGLG++ +   N+ +++  +WRI++ + SLW++W    +I+ ++ W +K N    SW  
Sbjct: 1018 EGGLGLKPLKEANEVSLLKLIWRILSARDSLWVKWVNKHLIRKETFWSVKENTGLGSWLW 1077

Query: 718  RKILNCRPYA--LHHIKYQVG 774
            RKIL  R  A   H ++ + G
Sbjct: 1078 RKILKQRDKARLFHRMEVRSG 1098


>gb|AAF98181.1|AC000107_4 F17F8.5 [Arabidopsis thaliana]
          Length = 872

 Score =  209 bits (533), Expect = 4e-52
 Identities = 103/259 (39%), Positives = 155/259 (59%), Gaps = 1/259 (0%)
 Frame = +1

Query: 1    PLCKNIDLTHIIFADDVLLFSHGDSNSVAAMMEGVSKFTNMSGLHLNMQKSSIYFGNISP 180
            P C+ + LTH+ FADD+++ S G + S+  ++E   +F   SGL ++++KS++Y   +SP
Sbjct: 338  PKCQRLGLTHLSFADDLMVLSDGKTRSIEGILEVFDEFCKRSGLRISLEKSTLYMAGVSP 397

Query: 181  PVGTQILGLTGLNVGTLPMTYLGLPLISARLTRSICSPLVMKLCARINSWTNRFLSFAGR 360
             +  +I      +VG LP+ YLGLPL++ RLT +  SPL+ ++  RI +WT RF SFAGR
Sbjct: 398  IIKQEIAAKFLFDVGQLPVRYLGLPLVTKRLTSADYSPLLEQIKKRIATWTFRFFSFAGR 457

Query: 361  LRLIKSILSGIQGYWSMYMFLPRNVLNQIKGMFSKFLWGGPSPDKTHYKVSWKVCCLSIE 540
              LIKS+L  I  +W     LPR  + +I  + S FLW G        K+SW + C    
Sbjct: 458  FNLIKSVLWSICNFWLAAFRLPRQCIREIDKLCSSFLWSGSEMSSHKAKISWDIVCKPKA 517

Query: 541  EGGLGIRDIICWNDAAIIYQLWRIVTNQKSLWIQWFRMFIIKSKSIWEIKPNAS-ASWCV 717
            EGGLG+R++   ND + +  +WRI++N  SLW +W   ++I+ KSIW +K + S  SW  
Sbjct: 518  EGGLGLRNLKEANDVSCLKLVWRIISNSNSLWTKWVAEYLIRKKSIWSLKQSTSMGSWIW 577

Query: 718  RKILNCRPYALHHIKYQVG 774
            RKIL  R  A    + +VG
Sbjct: 578  RKILKIRDVAKSFSRVEVG 596


>gb|AAG50886.1|AC025294_24 hypothetical protein [Arabidopsis thaliana]
          Length = 629

 Score =  203 bits (516), Expect = 4e-50
 Identities = 98/250 (39%), Positives = 150/250 (60%), Gaps = 1/250 (0%)
 Frame = +1

Query: 1   PLCKNIDLTHIIFADDVLLFSHGDSNSVAAMMEGVSKFTNMSGLHLNMQKSSIYFGNISP 180
           P CKN+ LTH+ FADD+++ + G   SV  ++E ++ F   SGL +NM+K+++Y   +S 
Sbjct: 96  PKCKNLGLTHLCFADDLMILTDGKVRSVDGIVEVMNLFAKRSGLQINMEKTTLYTAGVSD 155

Query: 181 PVGTQILGLTGLNVGTLPMTYLGLPLISARLTRSICSPLVMKLCARINSWTNRFLSFAGR 360
                ++      +G LP+ YLGLPL++ RLT+   SPL  ++  RI +WT+R+LSFAGR
Sbjct: 156 HNRYMMISRYPFGLGQLPVRYLGLPLVTKRLTKEDLSPLFEQIRNRIGTWTSRYLSFAGR 215

Query: 361 LRLIKSILSGIQGYWSMYMFLPRNVLNQIKGMFSKFLWGGPSPDKTHYKVSWKVCCLSIE 540
           L LI S+L     +W     LP   L +I  + S FLW GP   +   KVSW   C   +
Sbjct: 216 LNLISSVLWSTMNFWMSAFRLPSACLKEINSICSAFLWSGPELHRRKAKVSWDDICKPKQ 275

Query: 541 EGGLGIRDIICWNDAAIIYQLWRIVTNQKSLWIQWFRMFIIKSKSIWEIKPNAS-ASWCV 717
           EGGLG+R +   N  +++  +WR+ +N  SLW++W +M ++K +S W + PN+S  SW  
Sbjct: 276 EGGLGLRSLTEANVVSVLKLIWRVTSNDDSLWVKWSKMNLLKQESFWSLTPNSSLGSWMW 335

Query: 718 RKILNCRPYA 747
           +K+L  R  A
Sbjct: 336 KKMLKYRETA 345


>dbj|BAB09379.1| non-LTR retroelement reverse transcriptase-like protein [Arabidopsis
            thaliana]
          Length = 1223

 Score =  201 bits (510), Expect = 2e-49
 Identities = 97/259 (37%), Positives = 153/259 (59%), Gaps = 1/259 (0%)
 Frame = +1

Query: 1    PLCKNIDLTHIIFADDVLLFSHGDSNSVAAMMEGVSKFTNMSGLHLNMQKSSIYFGNISP 180
            P CK + LTH+ FADD+++ S G   S+  +++   +F   SGL ++++KS++Y   +S 
Sbjct: 691  PKCKTMGLTHLSFADDLMVLSDGKIRSIERIIKVFDEFAKWSGLRISLEKSTVYLAGLSA 750

Query: 181  PVGTQILGLTGLNVGTLPMTYLGLPLISARLTRSICSPLVMKLCARINSWTNRFLSFAGR 360
                ++      + G LP+ YLGLPLI+ RL+ + C PL+ ++  RI SWT+RFLS+AGR
Sbjct: 751  TARNEVADRFPFSSGQLPVRYLGLPLITKRLSTTDCLPLLEQVRKRIGSWTSRFLSYAGR 810

Query: 361  LRLIKSILSGIQGYWSMYMFLPRNVLNQIKGMFSKFLWGGPSPDKTHYKVSWKVCCLSIE 540
            L LI S+L  I  +W     LPR  + +++ M S FLW G   +    K+SW + C   +
Sbjct: 811  LNLISSVLWSICNFWLAAFRLPRKCIRELEKMCSAFLWSGTEMNSNKAKISWHMVCKPKD 870

Query: 541  EGGLGIRDIICWNDAAIIYQLWRIVTNQKSLWIQWFRMFIIKSKSIWEIKPNAS-ASWCV 717
            EGGLG+R +   ND   +  +W+IV++  SLW++W    ++++ S WE+K   S  SW  
Sbjct: 871  EGGLGLRSLKEANDVCCLKLVWKIVSHSNSLWVKWVDQHLLRNASFWEVKQTVSQGSWIW 930

Query: 718  RKILNCRPYALHHIKYQVG 774
            +K+L  R  A    K +VG
Sbjct: 931  KKLLKYREVAKTLSKVEVG 949


>dbj|BAB01344.1| reverse transcriptase-like protein [Arabidopsis thaliana]
          Length = 1115

 Score =  198 bits (504), Expect = 1e-48
 Identities = 97/250 (38%), Positives = 151/250 (60%), Gaps = 1/250 (0%)
 Frame = +1

Query: 1    PLCKNIDLTHIIFADDVLLFSHGDSNSVAAMMEGVSKFTNMSGLHLNMQKSSIYFGNISP 180
            P CKN+ LTH+ FADD+++ + G   SV  ++E ++ F   SGL +NM+K+++Y   +S 
Sbjct: 608  PKCKNLGLTHLCFADDLMILTDGKVRSVDGIVEVMNLFAKRSGLKINMEKTTLYTAGVSD 667

Query: 181  PVGTQILGLTGLNVGTLPMTYLGLPLISARLTRSICSPLVMKLCARINSWTNRFLSFAGR 360
                 ++      +  LP+ YLGLPL++ RLT+   SPL  ++  RI +WT+R+LSFAGR
Sbjct: 668  HNRHMMISRYPFGLAQLPVRYLGLPLVTKRLTKEDLSPLFEQIRNRIGTWTSRYLSFAGR 727

Query: 361  LRLIKSILSGIQGYWSMYMFLPRNVLNQIKGMFSKFLWGGPSPDKTHYKVSWKVCCLSIE 540
            L LI S+L     +W     LP   L +I  + S FLW GP  ++   KVSW   C   +
Sbjct: 728  LNLISSVLWSTMNFWMSAFRLPSACLKEINSICSAFLWSGPELNRRKAKVSWDDIC-KPK 786

Query: 541  EGGLGIRDIICWNDAAIIYQLWRIVTNQKSLWIQWFRMFIIKSKSIWEIKPNAS-ASWCV 717
            +GGLG+R +   N  +++  +WR+ +N  SLW++W +M ++K +S W +KPN+S  SW  
Sbjct: 787  QGGLGLRSLTEANVVSVLKLIWRVTSNDDSLWVKWSKMNLLKQESFWSLKPNSSLGSWMW 846

Query: 718  RKILNCRPYA 747
            +K+L  R  A
Sbjct: 847  KKMLKYRETA 856