BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00028445
         (221 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAF01687.1| hypothetical protein [Arabidopsis thaliana]            64   2e-08
dbj|BAA97290.1| non-LTR retroelement reverse transcriptase-like ...    64   2e-08
gb|AAF98181.1|AC000107_4 F17F8.5 [Arabidopsis thaliana]                63   2e-08
ref|XP_002331075.1| predicted protein [Populus trichocarpa] gi|2...    63   3e-08
gb|ABV21212.1| Ty1_Copia-element protein [Arabidopsis thaliana]        61   8e-08

>dbj|BAF01687.1| hypothetical protein [Arabidopsis thaliana]
          Length = 1072

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 27/62 (43%), Positives = 36/62 (58%)
 Frame = -3

Query: 204 LPRNVLNQIKGIFAKFLWGGSSPGSTHYKVSWKVCCLPIEEGGLGIRDVIGWNDAAIIYQ 25
           LP+  + +I+ + +KFLW GS  G    KVSW  CCLP  EGGLG R    WN   ++  
Sbjct: 684 LPKGCIKKIESLCSKFLWAGSIDGRKSSKVSWVDCCLPKSEGGLGFRSFGEWNKTLLLRL 743

Query: 24  LW 19
           +W
Sbjct: 744 IW 745


>dbj|BAA97290.1| non-LTR retroelement reverse transcriptase-like [Arabidopsis
           thaliana]
          Length = 1072

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 27/62 (43%), Positives = 36/62 (58%)
 Frame = -3

Query: 204 LPRNVLNQIKGIFAKFLWGGSSPGSTHYKVSWKVCCLPIEEGGLGIRDVIGWNDAAIIYQ 25
           LP+  + +I+ + +KFLW GS  G    KVSW  CCLP  EGGLG R    WN   ++  
Sbjct: 684 LPKGCIKKIESLCSKFLWAGSIDGRKSSKVSWVDCCLPKSEGGLGFRSFGEWNKTLLLRL 743

Query: 24  LW 19
           +W
Sbjct: 744 IW 745


>gb|AAF98181.1|AC000107_4 F17F8.5 [Arabidopsis thaliana]
          Length = 872

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 27/67 (40%), Positives = 41/67 (61%)
 Frame = -3

Query: 204 LPRNVLNQIKGIFAKFLWGGSSPGSTHYKVSWKVCCLPIEEGGLGIRDVIGWNDAAIIYQ 25
           LPR  + +I  + + FLW GS   S   K+SW + C P  EGGLG+R++   ND + +  
Sbjct: 478 LPRQCIREIDKLCSSFLWSGSEMSSHKAKISWDIVCKPKAEGGLGLRNLKEANDVSCLKL 537

Query: 24  LWRIVTN 4
           +WRI++N
Sbjct: 538 VWRIISN 544


>ref|XP_002331075.1| predicted protein [Populus trichocarpa] gi|222873039|gb|EEF10170.1|
           predicted protein [Populus trichocarpa]
          Length = 517

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 26/64 (40%), Positives = 38/64 (59%)
 Frame = -3

Query: 204 LPRNVLNQIKGIFAKFLWGGSSPGSTHYKVSWKVCCLPIEEGGLGIRDVIGWNDAAIIYQ 25
           LP  V+  ++ I   FLW GS   +T  KV+W   CLP +EGGLGI+ +  WN  A++  
Sbjct: 118 LPGQVIKNVEQIMKSFLWSGSDMRTTGAKVAWDQVCLPKKEGGLGIKSIKEWNKIALLKH 177

Query: 24  LWRI 13
           +W +
Sbjct: 178 IWNL 181


>gb|ABV21212.1| Ty1_Copia-element protein [Arabidopsis thaliana]
          Length = 438

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 26/67 (38%), Positives = 38/67 (56%)
 Frame = -3

Query: 204 LPRNVLNQIKGIFAKFLWGGSSPGSTHYKVSWKVCCLPIEEGGLGIRDVIGWNDAAIIYQ 25
           LP+  + +I+ + A+FLW G +      KVSW   CLP  EGGLG+R    WN A  +  
Sbjct: 95  LPKGCIREIESMCARFLWSGGTDEHHKAKVSWSTVCLPKAEGGLGVRKFTEWNTALNLKL 154

Query: 24  LWRIVTN 4
           +W + +N
Sbjct: 155 IWLLFSN 161