BLASTX nr result

ID: Bupleurum21_contig00028440 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00028440
         (424 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAD99219.1| polypeptide with a gag-like domain [Petunia x hy...    74   1e-11
emb|CAN81016.1| hypothetical protein VITISV_025518 [Vitis vinifera]    66   3e-09
emb|CAN65182.1| hypothetical protein VITISV_029570 [Vitis vinifera]    66   3e-09
emb|CAN65820.1| hypothetical protein VITISV_042324 [Vitis vinifera]    65   8e-09
emb|CAN62906.1| hypothetical protein VITISV_043610 [Vitis vinifera]    64   1e-08

>dbj|BAD99219.1| polypeptide with a gag-like domain [Petunia x hybrida]
          Length = 463

 Score = 74.3 bits (181), Expect = 1e-11
 Identities = 35/71 (49%), Positives = 51/71 (71%)
 Frame = +2

Query: 44  SSFQQHQRVIQFLMGLNDSYNVMRGSILMNSPLPSISQVYNLLLQEETQREIHVSTQFMS 223
           +  Q+ Q++IQFLMGLN+ Y+ +RG+ILM  PLPS +Q Y+++  EETQR I       +
Sbjct: 197 AKMQEDQQLIQFLMGLNEVYSGIRGNILMMKPLPSTAQAYSIISHEETQRGIAAGNNVST 256

Query: 224 DSASLNASSKN 256
           DSA+ NAS++N
Sbjct: 257 DSAAFNASTQN 267


>emb|CAN81016.1| hypothetical protein VITISV_025518 [Vitis vinifera]
          Length = 1461

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 43/113 (38%), Positives = 59/113 (52%), Gaps = 1/113 (0%)
 Frame = +2

Query: 38  KLSSFQQHQRVIQFLMGLNDSYNVMRGSILMNSPLPSISQVYNLLLQEETQREIHVSTQF 217
           KL    + +RV+QFLMGLNDSY  +RG IL+  PLP   +VY+L+LQ+E Q E+      
Sbjct: 210 KLKERDEKERVMQFLMGLNDSYAAIRGQILLMHPLPDTRRVYSLVLQQEKQVEV------ 263

Query: 218 MSDSASLNASSKNTYDTCVLKSKLSLSVY*FHLIIDIFQKKNQKYP-HSNYTD 373
                SLN  +KN Y     +   + S +         Q + QK P H +Y D
Sbjct: 264 -----SLNNGNKNHYAMLADRDNKATSAH---------QVQKQKTPLHCSYCD 302


>emb|CAN65182.1| hypothetical protein VITISV_029570 [Vitis vinifera]
          Length = 1002

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 33/73 (45%), Positives = 48/73 (65%)
 Frame = +2

Query: 50  FQQHQRVIQFLMGLNDSYNVMRGSILMNSPLPSISQVYNLLLQEETQREIHVSTQFMSDS 229
           +QQ + VIQFLMGLNDSY+  R  ILM  P+P +++V+ L+LQEE QR I+     +   
Sbjct: 94  YQQQEHVIQFLMGLNDSYSQTRSQILMMEPIPPLAKVFALVLQEERQRSINQGFSSLLQP 153

Query: 230 ASLNASSKNTYDT 268
            +L  SS+ + +T
Sbjct: 154 LALGDSSQASANT 166


>emb|CAN65820.1| hypothetical protein VITISV_042324 [Vitis vinifera]
          Length = 1262

 Score = 64.7 bits (156), Expect = 8e-09
 Identities = 36/83 (43%), Positives = 56/83 (67%), Gaps = 7/83 (8%)
 Frame = +2

Query: 41  LSSFQQHQRVIQFLMGLNDSYNVMRGSILMNSPLPSISQVYNLLLQEETQRE------IH 202
           L+  QQ   V++FL+GL+DSY+ +R  +L+ SPLPS+S+V++LLLQEE+QR       I 
Sbjct: 159 LTDRQQSDYVMKFLVGLHDSYSAIRSQLLLQSPLPSMSRVFSLLLQEESQRSLTNAVGIS 218

Query: 203 VSTQFM-SDSASLNASSKNTYDT 268
           + +Q M ++ +S   S+ NT  T
Sbjct: 219 IDSQAMVAEQSSRTVSTSNTQFT 241


>emb|CAN62906.1| hypothetical protein VITISV_043610 [Vitis vinifera]
          Length = 1498

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 31/61 (50%), Positives = 46/61 (75%)
 Frame = +2

Query: 53  QQHQRVIQFLMGLNDSYNVMRGSILMNSPLPSISQVYNLLLQEETQREIHVSTQFMSDSA 232
           Q  Q+++QFLMGLN+SY+V+RG IL+ +PLPS+ Q Y+ + QEE QR +  ST   ++SA
Sbjct: 171 QDQQKLMQFLMGLNESYSVIRGQILLMNPLPSVRQAYSTISQEEKQR-LLTSTNAAAESA 229

Query: 233 S 235
           +
Sbjct: 230 A 230


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