BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00028430
         (418 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003525660.1| PREDICTED: pentatricopeptide repeat-containi...   219   2e-55
ref|XP_003609266.1| Pentatricopeptide repeat protein [Medicago t...   216   1e-54
ref|XP_002274432.1| PREDICTED: pentatricopeptide repeat-containi...   214   4e-54
ref|XP_002324235.1| predicted protein [Populus trichocarpa] gi|2...   213   1e-53
ref|XP_004150015.1| PREDICTED: pentatricopeptide repeat-containi...   207   5e-52

>ref|XP_003525660.1| PREDICTED: pentatricopeptide repeat-containing protein At1g08070-like
            [Glycine max]
          Length = 736

 Score =  219 bits (557), Expect = 2e-55
 Identities = 107/139 (76%), Positives = 122/139 (87%)
 Frame = -2

Query: 417  DVARIRTRLNDMGIKKVPGSTSIELDGSVHEFVVSDRKHPRSQEINNMLDEIERLLALEG 238
            DVA+IRT+LND G+KKVPG TSIE+DG VHEF+V D+ HP+S+ I  MLDE++RLL   G
Sbjct: 585  DVAKIRTKLNDKGMKKVPGCTSIEIDGVVHEFLVGDKFHPQSENIFRMLDEVDRLLEETG 644

Query: 237  HVPDTSEVLYDIDEELKEGVLCQHSERLAIAFGLISTKPGTTIRIVKNLRVCGNCHSATK 58
             VPDTSEVLYD+DEE KEG L QHSE+LAIAFGLISTKPG+TIRIVKNLRVC NCHSATK
Sbjct: 645  FVPDTSEVLYDMDEEWKEGALTQHSEKLAIAFGLISTKPGSTIRIVKNLRVCRNCHSATK 704

Query: 57   MISKIYKREIIARDRNRFH 1
            +ISKI+ REIIARDRNRFH
Sbjct: 705  LISKIFNREIIARDRNRFH 723


>ref|XP_003609266.1| Pentatricopeptide repeat protein [Medicago truncatula]
            gi|355510321|gb|AES91463.1| Pentatricopeptide repeat
            protein [Medicago truncatula]
          Length = 738

 Score =  216 bits (551), Expect = 1e-54
 Identities = 105/139 (75%), Positives = 119/139 (85%)
 Frame = -2

Query: 417  DVARIRTRLNDMGIKKVPGSTSIELDGSVHEFVVSDRKHPRSQEINNMLDEIERLLALEG 238
            DVARIRTRLND G+KKVPG TSIE+DG VHEF+V D+ HP    I  ML+E+++LL   G
Sbjct: 587  DVARIRTRLNDKGMKKVPGCTSIEIDGDVHEFLVGDKFHPECNNIYKMLNEVDKLLEENG 646

Query: 237  HVPDTSEVLYDIDEELKEGVLCQHSERLAIAFGLISTKPGTTIRIVKNLRVCGNCHSATK 58
             VP+TSEVLYD+DEE KEG L QHSE+LAI+FGLI TKPGTTIRIVKNLRVCGNCHSATK
Sbjct: 647  FVPNTSEVLYDMDEEWKEGALSQHSEKLAISFGLIKTKPGTTIRIVKNLRVCGNCHSATK 706

Query: 57   MISKIYKREIIARDRNRFH 1
            +ISKI+ REIIARDRNRFH
Sbjct: 707  LISKIFNREIIARDRNRFH 725


>ref|XP_002274432.1| PREDICTED: pentatricopeptide repeat-containing protein At1g08070-like
            [Vitis vinifera]
          Length = 738

 Score =  214 bits (546), Expect = 4e-54
 Identities = 106/139 (76%), Positives = 120/139 (86%)
 Frame = -2

Query: 417  DVARIRTRLNDMGIKKVPGSTSIELDGSVHEFVVSDRKHPRSQEINNMLDEIERLLALEG 238
            DVARIRT+LND G+KKVPG +SIE+D  VHEF+V D+ H +SQ+I  MLDEI++LL   G
Sbjct: 587  DVARIRTKLNDKGMKKVPGCSSIEVDSVVHEFLVGDKVHEQSQDIYKMLDEIDQLLEKAG 646

Query: 237  HVPDTSEVLYDIDEELKEGVLCQHSERLAIAFGLISTKPGTTIRIVKNLRVCGNCHSATK 58
            HVPDTSEVLYD+DEE KEG L  HSE+LAIAFGLISTKP TTIRIVKNLRVCGNCHSA K
Sbjct: 647  HVPDTSEVLYDMDEEWKEGSLSHHSEKLAIAFGLISTKPETTIRIVKNLRVCGNCHSAIK 706

Query: 57   MISKIYKREIIARDRNRFH 1
            +ISKI+ REIIARDRNRFH
Sbjct: 707  LISKIFNREIIARDRNRFH 725


>ref|XP_002324235.1| predicted protein [Populus trichocarpa] gi|222865669|gb|EEF02800.1|
            predicted protein [Populus trichocarpa]
          Length = 736

 Score =  213 bits (543), Expect = 1e-53
 Identities = 106/139 (76%), Positives = 119/139 (85%)
 Frame = -2

Query: 417  DVARIRTRLNDMGIKKVPGSTSIELDGSVHEFVVSDRKHPRSQEINNMLDEIERLLALEG 238
            DVA+IRTRLND  +KKVPG +SIE+D  VHEF+V D+ HP+S EI  MLDEI+  L   G
Sbjct: 585  DVAKIRTRLNDNRMKKVPGCSSIEVDSVVHEFLVGDKVHPQSNEIYKMLDEIDMRLEKAG 644

Query: 237  HVPDTSEVLYDIDEELKEGVLCQHSERLAIAFGLISTKPGTTIRIVKNLRVCGNCHSATK 58
             VPDTSEVLYD+DEE KEGVL  HSE+LAIAFGLISTKPGTTIRI+KNLRVCGNCHSATK
Sbjct: 645  FVPDTSEVLYDMDEEWKEGVLSHHSEKLAIAFGLISTKPGTTIRIMKNLRVCGNCHSATK 704

Query: 57   MISKIYKREIIARDRNRFH 1
            +ISKI+ REIIARDRNRFH
Sbjct: 705  LISKIFNREIIARDRNRFH 723


>ref|XP_004150015.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Cucumis sativus]
           gi|449529868|ref|XP_004171920.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At1g08070-like [Cucumis sativus]
          Length = 734

 Score =  207 bits (528), Expect = 5e-52
 Identities = 101/139 (72%), Positives = 118/139 (84%)
 Frame = -2

Query: 417 DVARIRTRLNDMGIKKVPGSTSIELDGSVHEFVVSDRKHPRSQEINNMLDEIERLLALEG 238
           DVARIRTRLND G+KKVPG T+IE+D  VHEF+V D+ HP+S++I  ML+E++  L + G
Sbjct: 583 DVARIRTRLNDRGMKKVPGCTTIEVDNVVHEFLVGDKVHPQSEDIYRMLEEVDEQLKVFG 642

Query: 237 HVPDTSEVLYDIDEELKEGVLCQHSERLAIAFGLISTKPGTTIRIVKNLRVCGNCHSATK 58
            V DTSEVLYD+DEE KEG L  HSE+LAIAFGLISTKPGT IRI+KNLRVC NCHSATK
Sbjct: 643 FVADTSEVLYDMDEEWKEGALSHHSEKLAIAFGLISTKPGTPIRIIKNLRVCRNCHSATK 702

Query: 57  MISKIYKREIIARDRNRFH 1
           +ISKI+ REIIARDRNRFH
Sbjct: 703 LISKIFNREIIARDRNRFH 721