BLASTX nr result

ID: Bupleurum21_contig00028424 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00028424
         (428 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004157215.1| PREDICTED: LOW QUALITY PROTEIN: coiled-coil ...   175   4e-42
ref|XP_004140828.1| PREDICTED: coiled-coil domain-containing pro...   175   4e-42
ref|XP_002864194.1| hypothetical protein ARALYDRAFT_495344 [Arab...   173   1e-41
ref|XP_002274252.2| PREDICTED: coiled-coil domain-containing pro...   172   3e-41
emb|CBI22633.3| unnamed protein product [Vitis vinifera]              172   3e-41

>ref|XP_004157215.1| PREDICTED: LOW QUALITY PROTEIN: coiled-coil domain-containing
           protein 111 homolog [Cucumis sativus]
          Length = 489

 Score =  175 bits (443), Expect = 4e-42
 Identities = 83/123 (67%), Positives = 97/123 (78%), Gaps = 2/123 (1%)
 Frame = -3

Query: 363 RFSPLVFYGSPQGXXXXXXXXXXXXLHEIRRDLSEQSI--LRKEIWATFPRQEDAMKCAK 190
           +FSP+VFYGSP+G            L EIR DLSEQS   L K++WATFPRQE+A+K ++
Sbjct: 82  KFSPIVFYGSPRGVPPKRPSSLWRLLREIRVDLSEQSRFKLSKQVWATFPRQEEAIKFSR 141

Query: 189 EHIDVHIFSYQDHVKGQRRFLVSSYKEFWHRYKSMNPQFRHHYEVIQEGLPCHLYFDLEF 10
           EH DVHIFSYQDH  GQRRFLVSSY EFWHRYKSM+ + RHHYEVIQEG PCHLYFDLE+
Sbjct: 142 EHTDVHIFSYQDHFNGQRRFLVSSYSEFWHRYKSMDAKCRHHYEVIQEGAPCHLYFDLEY 201

Query: 9   NKK 1
           +K+
Sbjct: 202 SKR 204


>ref|XP_004140828.1| PREDICTED: coiled-coil domain-containing protein 111 homolog
           [Cucumis sativus]
          Length = 648

 Score =  175 bits (443), Expect = 4e-42
 Identities = 83/123 (67%), Positives = 97/123 (78%), Gaps = 2/123 (1%)
 Frame = -3

Query: 363 RFSPLVFYGSPQGXXXXXXXXXXXXLHEIRRDLSEQSI--LRKEIWATFPRQEDAMKCAK 190
           +FSP+VFYGSP+G            L EIR DLSEQS   L K++WATFPRQE+A+K ++
Sbjct: 82  KFSPIVFYGSPRGVPPKRPSSLWRLLREIRVDLSEQSRFKLSKQVWATFPRQEEAIKFSR 141

Query: 189 EHIDVHIFSYQDHVKGQRRFLVSSYKEFWHRYKSMNPQFRHHYEVIQEGLPCHLYFDLEF 10
           EH DVHIFSYQDH  GQRRFLVSSY EFWHRYKSM+ + RHHYEVIQEG PCHLYFDLE+
Sbjct: 142 EHTDVHIFSYQDHFNGQRRFLVSSYSEFWHRYKSMDAKCRHHYEVIQEGAPCHLYFDLEY 201

Query: 9   NKK 1
           +K+
Sbjct: 202 SKR 204


>ref|XP_002864194.1| hypothetical protein ARALYDRAFT_495344 [Arabidopsis lyrata subsp.
           lyrata] gi|297310029|gb|EFH40453.1| hypothetical protein
           ARALYDRAFT_495344 [Arabidopsis lyrata subsp. lyrata]
          Length = 494

 Score =  173 bits (438), Expect = 1e-41
 Identities = 82/125 (65%), Positives = 98/125 (78%), Gaps = 2/125 (1%)
 Frame = -3

Query: 369 GRRFSPLVFYGSPQGXXXXXXXXXXXXLHEIRRDLSEQ--SILRKEIWATFPRQEDAMKC 196
           GR+FSP+VFYGSP G            L EIR DLSE+  +I RK +WATFPRQ++A+K 
Sbjct: 92  GRQFSPIVFYGSPNGVPPKRPLSLLRLLREIRIDLSEERKAISRKGVWATFPRQDEAIKF 151

Query: 195 AKEHIDVHIFSYQDHVKGQRRFLVSSYKEFWHRYKSMNPQFRHHYEVIQEGLPCHLYFDL 16
            K H +V IFSYQDH  GQRRFLVS+Y+EFW+RYKSM+P+ RHHYEVIQEGLPCH+YFDL
Sbjct: 152 GKRHDNVRIFSYQDHFSGQRRFLVSTYEEFWNRYKSMDPRHRHHYEVIQEGLPCHMYFDL 211

Query: 15  EFNKK 1
           EFN+K
Sbjct: 212 EFNQK 216


>ref|XP_002274252.2| PREDICTED: coiled-coil domain-containing protein 111 homolog [Vitis
           vinifera]
          Length = 632

 Score =  172 bits (435), Expect = 3e-41
 Identities = 81/121 (66%), Positives = 96/121 (79%), Gaps = 2/121 (1%)
 Frame = -3

Query: 357 SPLVFYGSPQGXXXXXXXXXXXXLHEIRRDLSEQ--SILRKEIWATFPRQEDAMKCAKEH 184
           SP++FYGSP G            L EIR +LSEQ  S LR+E+WATFPRQ++++K A+ H
Sbjct: 102 SPVIFYGSPHGVPPKRPSSLLRLLREIRVELSEQNKSDLREEVWATFPRQDESIKFAQGH 161

Query: 183 IDVHIFSYQDHVKGQRRFLVSSYKEFWHRYKSMNPQFRHHYEVIQEGLPCHLYFDLEFNK 4
            DVHIFSYQDH+ GQRRFLVS+YKEFW RYK+M+ +FRHHYEVIQEG PCHLYFDLEFNK
Sbjct: 162 ADVHIFSYQDHLNGQRRFLVSTYKEFWQRYKNMDSKFRHHYEVIQEGFPCHLYFDLEFNK 221

Query: 3   K 1
           K
Sbjct: 222 K 222


>emb|CBI22633.3| unnamed protein product [Vitis vinifera]
          Length = 606

 Score =  172 bits (435), Expect = 3e-41
 Identities = 81/121 (66%), Positives = 96/121 (79%), Gaps = 2/121 (1%)
 Frame = -3

Query: 357 SPLVFYGSPQGXXXXXXXXXXXXLHEIRRDLSEQ--SILRKEIWATFPRQEDAMKCAKEH 184
           SP++FYGSP G            L EIR +LSEQ  S LR+E+WATFPRQ++++K A+ H
Sbjct: 76  SPVIFYGSPHGVPPKRPSSLLRLLREIRVELSEQNKSDLREEVWATFPRQDESIKFAQGH 135

Query: 183 IDVHIFSYQDHVKGQRRFLVSSYKEFWHRYKSMNPQFRHHYEVIQEGLPCHLYFDLEFNK 4
            DVHIFSYQDH+ GQRRFLVS+YKEFW RYK+M+ +FRHHYEVIQEG PCHLYFDLEFNK
Sbjct: 136 ADVHIFSYQDHLNGQRRFLVSTYKEFWQRYKNMDSKFRHHYEVIQEGFPCHLYFDLEFNK 195

Query: 3   K 1
           K
Sbjct: 196 K 196


Top