BLASTX nr result

ID: Bupleurum21_contig00028422 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00028422
         (463 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276854.2| PREDICTED: uncharacterized protein LOC100264...    72   5e-11
ref|XP_003541657.1| PREDICTED: uncharacterized protein LOC100779...    61   1e-07
ref|XP_002314400.1| predicted protein [Populus trichocarpa] gi|2...    56   3e-06

>ref|XP_002276854.2| PREDICTED: uncharacterized protein LOC100264897 [Vitis vinifera]
          Length = 119

 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 44/80 (55%), Positives = 54/80 (67%), Gaps = 2/80 (2%)
 Frame = +1

Query: 91  DIAPLLPSSGGLVP-SIGYSIPTIRSNPSQ-NPGDVFAFGPDSAIARSTAPLPESSAMSL 264
           DI+PL PS GG++P   G S+PTI SNPS  NP DV A GPD AI+ S A LP +S  SL
Sbjct: 41  DISPLFPSPGGVLPVPTGSSMPTIPSNPSPPNPDDVVALGPDFAISPS-ASLPATSLGSL 99

Query: 265 NVMKSLNIVVLMSLLACWSL 324
           N ++SL +VV + L A W L
Sbjct: 100 NAVESLYLVVFLGLPAFWLL 119


>ref|XP_003541657.1| PREDICTED: uncharacterized protein LOC100779758 [Glycine max]
          Length = 151

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 37/81 (45%), Positives = 49/81 (60%), Gaps = 3/81 (3%)
 Frame = +1

Query: 91  DIAPLLPSSGGLV--PSIGYSIPTIRSNPS-QNPGDVFAFGPDSAIARSTAPLPESSAMS 261
           DIAPLLPS GG++  P+ G  IPTI SNPS  NP D+ A GP SA +   +PL  S+A +
Sbjct: 67  DIAPLLPSPGGVLPTPAAGSDIPTIPSNPSPPNPDDIIAPGPLSAFSPFGSPL-SSNAPT 125

Query: 262 LNVMKSLNIVVLMSLLACWSL 324
            +++ S+       L  CW L
Sbjct: 126 TSLVASIATAFFAGLAVCWCL 146


>ref|XP_002314400.1| predicted protein [Populus trichocarpa] gi|222863440|gb|EEF00571.1|
           predicted protein [Populus trichocarpa]
          Length = 132

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 38/80 (47%), Positives = 49/80 (61%), Gaps = 2/80 (2%)
 Frame = +1

Query: 91  DIAPLLPSSGGLVPS-IGYSIPTIRSNPS-QNPGDVFAFGPDSAIARSTAPLPESSAMSL 264
           DIAPLLPS GG++PS    S+PTI S PS  NP +V A GP SA +   A LP SSA   
Sbjct: 57  DIAPLLPSPGGVLPSPTVSSVPTIPSTPSPPNPDEVVAPGPASAFSPLGA-LPASSASPR 115

Query: 265 NVMKSLNIVVLMSLLACWSL 324
           N+   +N  + +  +A WS+
Sbjct: 116 NL---INFAIAVGCIAYWSI 132


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