BLASTX nr result

ID: Bupleurum21_contig00028411 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00028411
         (730 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI16216.3| unnamed protein product [Vitis vinifera]              175   1e-41
gb|ABD32315.1| CCT [Medicago truncatula]                              167   3e-39
ref|XP_002330909.1| predicted protein [Populus trichocarpa] gi|2...   164   2e-38
ref|XP_003597300.1| Zinc finger protein CONSTANS-like protein [M...   159   4e-37
ref|XP_003606565.1| Zinc finger protein CONSTANS-like protein [M...   152   7e-35

>emb|CBI16216.3| unnamed protein product [Vitis vinifera]
          Length = 251

 Score =  175 bits (443), Expect = 1e-41
 Identities = 101/188 (53%), Positives = 130/188 (69%), Gaps = 1/188 (0%)
 Frame = -3

Query: 569 NEFDSVSSPTLTMKQELCNYTTSSGCSSYGFPTSIT-SHETQPPGLIMQRSLSSHSLQKY 393
           ++FDSVS     +     N    + CSS G  +S+T S+ TQ P  I QRS+SSHSLQ  
Sbjct: 48  DDFDSVSISDALLPH---NSDLGNSCSSGGSSSSLTTSYSTQRPSFI-QRSVSSHSLQH- 102

Query: 392 MNSLQYHQQLTQFSGLDDSSPVRKAFSTGDLEGINMVQQHHRSDSPLSNESSIIECMNAK 213
            N    H        L+  SPVR+ +STGDL+ INM+Q HHR +  +SN++SIIE M  K
Sbjct: 103 -NGRHPHPISLVSEFLESESPVRRVYSTGDLQRINMMQHHHRPEISISNDTSIIEGMMTK 161

Query: 212 ACKYSPEEKREKIEKYRSKRSQRNFSKKIKYVCRKTLADSRPRIRGRFAKNIDENEKESQ 33
           A +YSPEEK+E+IE+YRSKR+QRNF+KKIKY CRKTLADSRPRIRGRFA+N +E EK SQ
Sbjct: 162 ASRYSPEEKKERIERYRSKRNQRNFNKKIKYACRKTLADSRPRIRGRFARN-EEIEKGSQ 220

Query: 32  MIDEWNHI 9
              +W+++
Sbjct: 221 --SQWSNL 226


>gb|ABD32315.1| CCT [Medicago truncatula]
          Length = 251

 Score =  167 bits (422), Expect = 3e-39
 Identities = 106/215 (49%), Positives = 139/215 (64%), Gaps = 4/215 (1%)
 Frame = -3

Query: 641 PFSNDFVENSLVPTLQLDSLMIPNNEFDSVSSPTLTMKQELCNYTTSSGCSSYGFPTSIT 462
           PFS  F+ +S  P ++ ++ +    E DS      T+ Q L N   SSG SSYG   S +
Sbjct: 11  PFSTPFLLHSSSPFMEQNNSIPDFTELDSFQD---TLSQ-LNNSELSSGYSSYGGSPSPS 66

Query: 461 SHETQPPGLIMQRSLSSHSLQKYMNSLQYHQQLTQFSGLDDS--SPVRKAFSTGDLEGIN 288
           +       ++MQRS+SSHSLQ Y N   ++     F+ L DS  +PVRK  STGDL+ IN
Sbjct: 67  TP------ILMQRSISSHSLQ-YNNGTHHYPLSAFFADLLDSDDAPVRKVCSTGDLQRIN 119

Query: 287 MVQQ--HHRSDSPLSNESSIIECMNAKACKYSPEEKREKIEKYRSKRSQRNFSKKIKYVC 114
            +Q   HH  DSPLS+ESS+I    ++ C YSPEEK+ +IE+YR KR+QRNF+KKIKYVC
Sbjct: 120 GMQHNHHHHVDSPLSSESSMIIEGMSRVCPYSPEEKKVRIERYRIKRNQRNFNKKIKYVC 179

Query: 113 RKTLADSRPRIRGRFAKNIDENEKESQMIDEWNHI 9
           RKTLAD RPRIRGRFA+N   +E + + I EW+HI
Sbjct: 180 RKTLADRRPRIRGRFARN---DEIDKKPIVEWSHI 211


>ref|XP_002330909.1| predicted protein [Populus trichocarpa] gi|222872731|gb|EEF09862.1|
           predicted protein [Populus trichocarpa]
          Length = 227

 Score =  164 bits (415), Expect = 2e-38
 Identities = 99/202 (49%), Positives = 131/202 (64%), Gaps = 4/202 (1%)
 Frame = -3

Query: 599 LQLDSLMIPNNEFDSVSSPTLTMKQEL---CNYTTSSGCSSYGFPTSITSHETQPPGLIM 429
           L  D L+IP+    + ++  + +   +   C  +T+SGCSSYG P+S+            
Sbjct: 26  LAADQLVIPDPVAAAAAAAGIELGSTVGSHCTSSTASGCSSYGSPSSL------------ 73

Query: 428 QRSLSSHSLQKYMNSLQYHQQLTQFSGLD-DSSPVRKAFSTGDLEGINMVQQHHRSDSPL 252
            RS+SSHS QK  N    H        LD D+SPVR+ FSTGDL      Q  HR++SPL
Sbjct: 74  -RSISSHSFQK--NGYHCHFASHPHDFLDMDTSPVRRVFSTGDL------QHGHRAESPL 124

Query: 251 SNESSIIECMNAKACKYSPEEKREKIEKYRSKRSQRNFSKKIKYVCRKTLADSRPRIRGR 72
            +ESS+I    +KACKYSPEEK+E+IE+YRSKR+QRNF+KKIKY CRK LADSRPRIRGR
Sbjct: 125 LSESSLIIESMSKACKYSPEEKKERIERYRSKRNQRNFNKKIKYECRKILADSRPRIRGR 184

Query: 71  FAKNIDENEKESQMIDEWNHIA 6
           FA+N DE EK  Q+  +W++++
Sbjct: 185 FARN-DEIEKNPQL--QWSNVS 203


>ref|XP_003597300.1| Zinc finger protein CONSTANS-like protein [Medicago truncatula]
           gi|355486348|gb|AES67551.1| Zinc finger protein
           CONSTANS-like protein [Medicago truncatula]
          Length = 227

 Score =  159 bits (403), Expect = 4e-37
 Identities = 99/190 (52%), Positives = 127/190 (66%), Gaps = 4/190 (2%)
 Frame = -3

Query: 566 EFDSVSSPTLTMKQELCNYTTSSGCSSYGFPTSITSHETQPPGLIMQRSLSSHSLQKYMN 387
           +F  + S   T+ Q L N   SSG SSYG   S ++       ++MQRS+SSHSLQ Y N
Sbjct: 9   DFTELDSFQDTLSQ-LNNSELSSGYSSYGGSPSPSTP------ILMQRSISSHSLQ-YNN 60

Query: 386 SLQYHQQLTQFSGLDDS--SPVRKAFSTGDLEGINMVQQ--HHRSDSPLSNESSIIECMN 219
              ++     F+ L DS  +PVRK  STGDL+ IN +Q   HH  DSPLS+ESS+I    
Sbjct: 61  GTHHYPLSAFFADLLDSDDAPVRKVCSTGDLQRINGMQHNHHHHVDSPLSSESSMIIEGM 120

Query: 218 AKACKYSPEEKREKIEKYRSKRSQRNFSKKIKYVCRKTLADSRPRIRGRFAKNIDENEKE 39
           ++ C YSPEEK+ +IE+YR KR+QRNF+KKIKYVCRKTLAD RPRIRGRFA+N   +E +
Sbjct: 121 SRVCPYSPEEKKVRIERYRIKRNQRNFNKKIKYVCRKTLADRRPRIRGRFARN---DEID 177

Query: 38  SQMIDEWNHI 9
            + I EW+HI
Sbjct: 178 KKPIVEWSHI 187


>ref|XP_003606565.1| Zinc finger protein CONSTANS-like protein [Medicago truncatula]
           gi|355507620|gb|AES88762.1| Zinc finger protein
           CONSTANS-like protein [Medicago truncatula]
          Length = 242

 Score =  152 bits (384), Expect = 7e-35
 Identities = 94/177 (53%), Positives = 121/177 (68%), Gaps = 7/177 (3%)
 Frame = -3

Query: 515 NYTT-SSGCSSYGFPTSITSHETQPPGLIMQRSLSSHSLQKYMNSLQYHQQL-TQFSGLD 342
           NY + SSGC+SY             P  +MQRS+SSHSLQK  N + +H    T F+ L 
Sbjct: 41  NYNSCSSGCASY----------LGSPDRLMQRSISSHSLQK--NDVPHHHPFSTLFAELL 88

Query: 341 D--SSPVRKAFSTGDLEGI--NMVQQHHRSDSPLSNESS-IIECMNAKACKYSPEEKREK 177
           D  + PVR+ +STGDL+     M Q +H+SDSPLS ES+ IIE M+  A  YSPEEK+ +
Sbjct: 89  DQENGPVRRVYSTGDLDQRVGGMQQYYHQSDSPLSTESNMIIEEMSRPASPYSPEEKKVR 148

Query: 176 IEKYRSKRSQRNFSKKIKYVCRKTLADSRPRIRGRFAKNIDENEKESQMIDEWNHIA 6
           IE+YRSK++QRN++KKIKYVCRKTLADSRPRIRGRFAKN   +E      ++W+HI+
Sbjct: 149 IERYRSKKNQRNYNKKIKYVCRKTLADSRPRIRGRFAKN---DEIVRNPPNQWSHIS 202


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