BLASTX nr result

ID: Bupleurum21_contig00028410 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00028410
         (377 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275599.1| PREDICTED: uncharacterized protein LOC100264...   122   3e-26
ref|XP_002320311.1| predicted protein [Populus trichocarpa] gi|2...   119   3e-25
ref|XP_003625953.1| hypothetical protein MTR_7g109360 [Medicago ...   119   3e-25
ref|XP_002302757.1| predicted protein [Populus trichocarpa] gi|2...   118   6e-25
ref|XP_003521588.1| PREDICTED: uncharacterized protein LOC100800...   116   2e-24

>ref|XP_002275599.1| PREDICTED: uncharacterized protein LOC100264117 [Vitis vinifera]
           gi|297743964|emb|CBI36934.3| unnamed protein product
           [Vitis vinifera]
          Length = 558

 Score =  122 bits (306), Expect = 3e-26
 Identities = 70/121 (57%), Positives = 76/121 (62%)
 Frame = +1

Query: 13  SLTCAEKKPWWLTNRKIVDKYVKDARCLIATQEPSEXXXXXXXXXXXXXXSPKCESALEL 192
           S+   EKK WWL N+KIVDKYVKDARCLIATQE SE              SP+ E ALEL
Sbjct: 6   SVAGGEKKHWWLRNKKIVDKYVKDARCLIATQEQSEIATALNLLDAALGLSPRFEVALEL 65

Query: 193 KARSLLYLRRFKDVADMLQDYIPSLKMXXXXXXXXXXXXXXXXXXXQHFSKERVQLLPSG 372
           KARSLLYLRRFKDVADMLQDYIPSLKM                   Q  S+ERV+LL S 
Sbjct: 66  KARSLLYLRRFKDVADMLQDYIPSLKM--------VSDDSSSDNSSQQLSRERVKLLSSS 117

Query: 373 D 375
           +
Sbjct: 118 N 118


>ref|XP_002320311.1| predicted protein [Populus trichocarpa] gi|222861084|gb|EEE98626.1|
           predicted protein [Populus trichocarpa]
          Length = 534

 Score =  119 bits (297), Expect = 3e-25
 Identities = 68/114 (59%), Positives = 73/114 (64%)
 Frame = +1

Query: 28  EKKPWWLTNRKIVDKYVKDARCLIATQEPSEXXXXXXXXXXXXXXSPKCESALELKARSL 207
           EKK WWL+NRKIVDKY+KDAR LIA+QE SE              SP+ E ALELKARSL
Sbjct: 13  EKKHWWLSNRKIVDKYIKDARNLIASQEMSEIASALNLLDAALALSPRFEVALELKARSL 72

Query: 208 LYLRRFKDVADMLQDYIPSLKMXXXXXXXXXXXXXXXXXXXQHFSKERVQLLPS 369
           LYLRRFKDVADMLQDYIPSLKM                   Q  S+ERV LLPS
Sbjct: 73  LYLRRFKDVADMLQDYIPSLKM----ANDDSGSISASDSSSQQLSRERVNLLPS 122


>ref|XP_003625953.1| hypothetical protein MTR_7g109360 [Medicago truncatula]
           gi|355500968|gb|AES82171.1| hypothetical protein
           MTR_7g109360 [Medicago truncatula]
          Length = 574

 Score =  119 bits (297), Expect = 3e-25
 Identities = 60/87 (68%), Positives = 66/87 (75%)
 Frame = +1

Query: 13  SLTCAEKKPWWLTNRKIVDKYVKDARCLIATQEPSEXXXXXXXXXXXXXXSPKCESALEL 192
           SLT  EKK WWLTNRKIV+KY+KDAR LIATQE SE              SP+ + ALEL
Sbjct: 7   SLTATEKKHWWLTNRKIVEKYIKDARSLIATQEQSEILSALNLLDAALAISPRLDQALEL 66

Query: 193 KARSLLYLRRFKDVADMLQDYIPSLKM 273
           +ARSLLYLRRFKDVADMLQDYIPSL+M
Sbjct: 67  RARSLLYLRRFKDVADMLQDYIPSLRM 93


>ref|XP_002302757.1| predicted protein [Populus trichocarpa] gi|222844483|gb|EEE82030.1|
           predicted protein [Populus trichocarpa]
          Length = 569

 Score =  118 bits (295), Expect = 6e-25
 Identities = 67/118 (56%), Positives = 76/118 (64%)
 Frame = +1

Query: 16  LTCAEKKPWWLTNRKIVDKYVKDARCLIATQEPSEXXXXXXXXXXXXXXSPKCESALELK 195
           L+  EKK WWL+NRKIVDKY+KDAR LIA++E SE              SP+ E ALELK
Sbjct: 9   LSMNEKKHWWLSNRKIVDKYIKDARNLIASEEQSEIASALKLLDAALALSPRLEVALELK 68

Query: 196 ARSLLYLRRFKDVADMLQDYIPSLKMXXXXXXXXXXXXXXXXXXXQHFSKERVQLLPS 369
           ARSLLYLRRFK+VADMLQDYIPSLKM                   Q  S+ERV+LLPS
Sbjct: 69  ARSLLYLRRFKEVADMLQDYIPSLKM----ANDDSGSISSSDSSSQQLSRERVKLLPS 122


>ref|XP_003521588.1| PREDICTED: uncharacterized protein LOC100800231 [Glycine max]
          Length = 570

 Score =  116 bits (290), Expect = 2e-24
 Identities = 62/119 (52%), Positives = 75/119 (63%)
 Frame = +1

Query: 13  SLTCAEKKPWWLTNRKIVDKYVKDARCLIATQEPSEXXXXXXXXXXXXXXSPKCESALEL 192
           +L+  EKK WWLTNRKIV+KY+KDAR LIATQ+ SE              SP+ + ALEL
Sbjct: 7   TLSATEKKHWWLTNRKIVEKYIKDARSLIATQDQSEIASALNLVDAALAISPRFDQALEL 66

Query: 193 KARSLLYLRRFKDVADMLQDYIPSLKMXXXXXXXXXXXXXXXXXXXQHFSKERVQLLPS 369
           +AR+LLYLRRFK+VADMLQDYIPSL+M                   Q  S+E V+LL S
Sbjct: 67  RARALLYLRRFKEVADMLQDYIPSLRMGNDDSSSSSSSSSSSDTSSQQLSREGVKLLSS 125


Top