BLASTX nr result

ID: Bupleurum21_contig00028407 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00028407
         (290 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAY46941.1| plastid delta4 multifunctional acyl-acyl carrier ...   133   1e-29
sp|P32063.1|STAD_CORSA RecName: Full=Omega-12 acyl-[acyl-carrier...   128   4e-28
pdb|2UW1|B Chain B, Ivy Desaturase Structure                          124   8e-27
pdb|2UW1|A Chain A, Ivy Desaturase Structure                          124   1e-26
gb|AEJ87846.1| stearoyl-ACP desaturase [Ginkgo biloba]                105   4e-21

>gb|AAY46941.1| plastid delta4 multifunctional acyl-acyl carrier protein desaturase
           [Hedera helix]
          Length = 361

 Score =  133 bits (335), Expect = 1e-29
 Identities = 68/89 (76%), Positives = 74/89 (83%), Gaps = 4/89 (4%)
 Frame = +2

Query: 2   DNLLFKHFTAVAKQTGVYSAGDYCDILEFLVDKWNVKMLTGLSDEGRKAQEHVCRLTHSI 181
           D LLFKHFTAVA++ GVYSA DYCDILEFLVDKWNV+ LTGLSDEGRKAQE+VC L   I
Sbjct: 270 DELLFKHFTAVAQRVGVYSALDYCDILEFLVDKWNVERLTGLSDEGRKAQEYVCELGPKI 329

Query: 182 RRMEEMVQVKE----SELPVSFSWIFNRE 256
           RR+EE VQ KE    +E PVSFSWIFNRE
Sbjct: 330 RRVEEKVQGKEKKKKAEHPVSFSWIFNRE 358


>sp|P32063.1|STAD_CORSA RecName: Full=Omega-12 acyl-[acyl-carrier-protein] desaturase,
           chloroplastic; AltName: Full=Stearoyl-ACP desaturase;
           Flags: Precursor gi|167389|gb|AAC63059.1|
           delta-4-palmitoyl-acyl carrier protein desaturase
           [Coriandrum sativum] gi|59896210|gb|AAX11452.1|
           delta-4-palmitoyl-ACP desaturase [Coriandrum sativum]
          Length = 385

 Score =  128 bits (322), Expect = 4e-28
 Identities = 62/87 (71%), Positives = 73/87 (83%), Gaps = 2/87 (2%)
 Frame = +2

Query: 2   DNLLFKHFTAVAKQTGVYSAGDYCDILEFLVDKWNVKMLTGLSDEGRKAQEHVCRLTHSI 181
           D++LFKHFTAVA+Q GVYSA DYCDI++FLVDKWNV  +TGLS EGRKAQE+VC L   I
Sbjct: 296 DDMLFKHFTAVAQQIGVYSAWDYCDIIDFLVDKWNVAKMTGLSGEGRKAQEYVCSLAAKI 355

Query: 182 RRMEEMVQVKESE--LPVSFSWIFNRE 256
           RR+EE VQ KE +  LPV+FSWIFNR+
Sbjct: 356 RRVEEKVQGKEKKAVLPVAFSWIFNRQ 382


>pdb|2UW1|B Chain B, Ivy Desaturase Structure
          Length = 338

 Score =  124 bits (311), Expect = 8e-27
 Identities = 61/86 (70%), Positives = 70/86 (81%), Gaps = 1/86 (1%)
 Frame = +2

Query: 2   DNLLFKHFTAVAKQTGVYSAGDYCDILEFLVDKWNVKMLTGLSDEGRKAQEHVCRLTHSI 181
           D LLFKHFTAVA++ GVYSA DYCDILEFLVDKWNV+ LTGLSDEGRKAQE+VC L   I
Sbjct: 250 DELLFKHFTAVAQRVGVYSALDYCDILEFLVDKWNVERLTGLSDEGRKAQEYVCELGPKI 309

Query: 182 RRMEEMVQVKESELP-VSFSWIFNRE 256
           RR+EE  Q +  E P + FSWIF+R+
Sbjct: 310 RRLEERAQGRAKEAPTMPFSWIFDRQ 335


>pdb|2UW1|A Chain A, Ivy Desaturase Structure
          Length = 338

 Score =  124 bits (310), Expect = 1e-26
 Identities = 61/86 (70%), Positives = 70/86 (81%), Gaps = 1/86 (1%)
 Frame = +2

Query: 2   DNLLFKHFTAVAKQTGVYSAGDYCDILEFLVDKWNVKMLTGLSDEGRKAQEHVCRLTHSI 181
           D LLFKHFTAVA++ GVYSA DYCDILEFLVDKWNV+ LTGLSDEGRKAQE+VC L   I
Sbjct: 250 DELLFKHFTAVAQRLGVYSALDYCDILEFLVDKWNVERLTGLSDEGRKAQEYVCELGPKI 309

Query: 182 RRMEEMVQVKESELP-VSFSWIFNRE 256
           RR+EE  Q +  E P + FSWIF+R+
Sbjct: 310 RRLEERAQGRAKEAPTMPFSWIFDRQ 335


>gb|AEJ87846.1| stearoyl-ACP desaturase [Ginkgo biloba]
          Length = 412

 Score =  105 bits (262), Expect = 4e-21
 Identities = 53/87 (60%), Positives = 66/87 (75%), Gaps = 2/87 (2%)
 Frame = +2

Query: 2   DNLLFKHFTAVAKQTGVYSAGDYCDILEFLVDKWNVKMLTGLSDEGRKAQEHVCRLTHSI 181
           D+ LF HF+AVA++ GVY+A DY DILEFLV +WNV+ + GLS EGRKAQE VC+L   I
Sbjct: 324 DDNLFHHFSAVAQRLGVYTAKDYADILEFLVKRWNVEKIEGLSSEGRKAQEFVCKLAPRI 383

Query: 182 RRMEEMVQ--VKESELPVSFSWIFNRE 256
           RR+EE  Q   K+ E+ + FSWIFNRE
Sbjct: 384 RRLEERAQQRAKQGEI-IPFSWIFNRE 409


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