BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00028404
         (472 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002331075.1| predicted protein [Populus trichocarpa] gi|2...    64   1e-08
gb|ABW81094.1| RT6non-ltr [Cleome spinosa]                             58   7e-07
gb|AAD12028.1| putative non-LTR retroelement reverse transcripta...    55   5e-06
gb|AAC63678.1| putative non-LTR retroelement reverse transcripta...    55   6e-06
dbj|BAB08692.1| non-LTR retroelement reverse transcriptase-like ...    55   6e-06

>ref|XP_002331075.1| predicted protein [Populus trichocarpa] gi|222873039|gb|EEF10170.1|
           predicted protein [Populus trichocarpa]
          Length = 517

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 27/61 (44%), Positives = 36/61 (59%)
 Frame = -1

Query: 454 SLWLDWFRLNVLKGRSIWAIKTPSFAAWGVRKILNHRQLALRYLTYKVGPNCSFSLWYDP 275
           S+W  W R N+L+GR+ W IKTP   +W   KIL  R LA   + Y +G   + SLW+D 
Sbjct: 188 SIWSTWIRSNLLRGRNFWTIKTPQNCSWAWGKILKLRSLAWPKMKYIIGDGMTTSLWFDN 247

Query: 274 W 272
           W
Sbjct: 248 W 248


>gb|ABW81094.1| RT6non-ltr [Cleome spinosa]
          Length = 459

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 27/77 (35%), Positives = 42/77 (54%), Gaps = 4/77 (5%)
 Frame = -1

Query: 457 SSLWLDWFRLNVLKGRSIWAIKTPSFAAWGVRKILNHRQLALRYLTYKVGPNCSFSLWYD 278
           SSLW+ W + NVLK  S W     +  +W VRK+LN + LA +++  ++G     S W+D
Sbjct: 238 SSLWVAWLKRNVLKRGSFWDTVPTARHSWNVRKLLNMKDLAGKFIRCRIGNGNMASFWFD 297

Query: 277 PW----PGISFVSRFGP 239
            W    P + ++   GP
Sbjct: 298 NWTDLGPLLDYIGSDGP 314


>gb|AAD12028.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1447

 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 25/77 (32%), Positives = 41/77 (53%), Gaps = 1/77 (1%)
 Frame = -1

Query: 472  IINPGSSLWLDWFRLNVLKGRSIWAIK-TPSFAAWGVRKILNHRQLALRYLTYKVGPNCS 296
            I++ G SLW+ W   N+LK  S W IK + +  +W  +K+L +R++A  +   +V     
Sbjct: 1118 ILSHGDSLWVKWIETNLLKNNSFWIIKSSTTMGSWMWKKLLKYREVAKTFSKIEVHNGQR 1177

Query: 295  FSLWYDPWPGISFVSRF 245
             S WYD W  +  +  F
Sbjct: 1178 TSFWYDDWSCMGRIMNF 1194


>gb|AAC63678.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
           thaliana]
          Length = 1216

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 24/62 (38%), Positives = 37/62 (59%), Gaps = 1/62 (1%)
 Frame = -1

Query: 454 SLWLDWFRLNVLKGRSIWAIKTPS-FAAWGVRKILNHRQLALRYLTYKVGPNCSFSLWYD 278
           SLW+ W R+N+LK  S W+I T S   +W  R++L HR++A  +   +V    + S W+D
Sbjct: 621 SLWVKWTRMNLLKKESFWSIGTHSTLGSWIWRRLLKHREVAKSFCKIEVNNGVNTSFWFD 680

Query: 277 PW 272
            W
Sbjct: 681 NW 682


>dbj|BAB08692.1| non-LTR retroelement reverse transcriptase-like protein
           [Arabidopsis thaliana] gi|93007380|gb|ABE97193.1|
           hypothetical protein At5g13655 [Arabidopsis thaliana]
          Length = 385

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 28/79 (35%), Positives = 44/79 (55%), Gaps = 2/79 (2%)
 Frame = -1

Query: 472 IINPGSSLWLDWFRLNVLKGRSIWAIK-TPSFAAWGVRKILNHRQLALRYLTYKVGPNCS 296
           I++   SLW+DW + ++L+G S+WA+K T S  +W  +K+L +R  A  +    V    S
Sbjct: 53  ILSAKGSLWVDWVKKHLLRGGSLWAVKETSSRGSWIWKKLLKYRDKAKCFHKVDVRNGES 112

Query: 295 FSLWYDPWPGIS-FVSRFG 242
            S WYD W  +     +FG
Sbjct: 113 TSFWYDSWSSLGCLYDKFG 131