BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00028377
         (276 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAD32866.1|AC005489_4 F14N23.4 [Arabidopsis thaliana]               58   1e-08
gb|AAD26953.1| putative non-LTR retrolelement reverse transcript...    51   2e-07
ref|XP_003543991.1| PREDICTED: uncharacterized protein LOC100811...    59   4e-07
ref|NP_567266.1| RNA-directed DNA polymerase (reverse transcript...    48   2e-06
gb|ABK28243.1| unknown [Arabidopsis thaliana]                          48   2e-06

>gb|AAD32866.1|AC005489_4 F14N23.4 [Arabidopsis thaliana]
          Length = 1161

 Score = 58.2 bits (139), Expect(2) = 1e-08
 Identities = 25/41 (60%), Positives = 30/41 (73%)
 Frame = +3

Query: 3    HGKLPTKDRLIRFGLTISPTCVLCNAADESINHLFFACSYS 125
            H +L T+DRL R+G +I PTCVLCN  DES  HLFF C +S
Sbjct: 1008 HNRLHTRDRLRRWGFSIPPTCVLCNDLDESREHLFFRCQFS 1048



 Score = 25.8 bits (55), Expect(2) = 1e-08
 Identities = 10/21 (47%), Positives = 13/21 (61%)
 Frame = +1

Query: 214  LFIACATYAIWKERNDRIHGS 276
            L    + Y IW+ERN RIH +
Sbjct: 1089 LLFHASVYFIWRERNLRIHSN 1109


>gb|AAD26953.1| putative non-LTR retrolelement reverse transcriptase [Arabidopsis
           thaliana]
          Length = 323

 Score = 51.2 bits (121), Expect(2) = 2e-07
 Identities = 21/40 (52%), Positives = 29/40 (72%)
 Frame = +3

Query: 9   KLPTKDRLIRFGLTISPTCVLCNAADESINHLFFACSYSD 128
           +L T+DRL ++GL I   CVLCN  DE+ +HLFF C +S+
Sbjct: 178 RLHTRDRLTQWGLNIPTVCVLCNVVDETHDHLFFQCQFSN 217



 Score = 28.5 bits (62), Expect(2) = 2e-07
 Identities = 11/25 (44%), Positives = 15/25 (60%)
 Frame = +1

Query: 196 LQKLLHLFIACATYAIWKERNDRIH 270
           L  ++ L    + Y IW+ERN RIH
Sbjct: 251 LSLIIKLLFQASVYLIWRERNCRIH 275


>ref|XP_003543991.1| PREDICTED: uncharacterized protein LOC100811508 [Glycine max]
          Length = 1441

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 27/39 (69%), Positives = 29/39 (74%)
 Frame = +3

Query: 3    HGKLPTKDRLIRFGLTISPTCVLCNAADESINHLFFACS 119
            H KL TKDRL RFG+  S  C +CN ADESINHLFF CS
Sbjct: 1304 HKKLSTKDRLRRFGMIQSSDCSICNCADESINHLFFNCS 1342


>ref|NP_567266.1| RNA-directed DNA polymerase (reverse transcriptase)-related family
           protein [Arabidopsis thaliana]
           gi|5732057|gb|AAD48956.1|AF149414_5 contains similarity
           to a family of Arabidopsis thaliana predicted proteins,
           which have similarity to reverse transcriptases; see
           T14P8.10 (GB:AF069298) [Arabidopsis thaliana]
           gi|7267223|emb|CAB80830.1| AT4g04650 [Arabidopsis
           thaliana] gi|332657009|gb|AEE82409.1| RNA-directed DNA
           polymerase (reverse transcriptase)-related family
           protein [Arabidopsis thaliana]
          Length = 332

 Score = 48.1 bits (113), Expect(2) = 2e-06
 Identities = 21/39 (53%), Positives = 28/39 (71%)
 Frame = +3

Query: 9   KLPTKDRLIRFGLTISPTCVLCNAADESINHLFFACSYS 125
           +L T+DRL  +GL+I   C+LCNA D+S  HLFF C +S
Sbjct: 153 RLHTRDRLQNWGLSIPAECLLCNAHDDSRAHLFFECQFS 191



 Score = 28.5 bits (62), Expect(2) = 2e-06
 Identities = 10/22 (45%), Positives = 14/22 (63%)
 Frame = +1

Query: 205 LLHLFIACATYAIWKERNDRIH 270
           ++ L      YAIW+ERN R+H
Sbjct: 229 IIRLAFHSCVYAIWRERNQRLH 250


>gb|ABK28243.1| unknown [Arabidopsis thaliana]
          Length = 297

 Score = 48.1 bits (113), Expect(2) = 2e-06
 Identities = 21/39 (53%), Positives = 28/39 (71%)
 Frame = +3

Query: 9   KLPTKDRLIRFGLTISPTCVLCNAADESINHLFFACSYS 125
           +L T+DRL  +GL+I   C+LCNA D+S  HLFF C +S
Sbjct: 153 RLHTRDRLQNWGLSIPAECLLCNAHDDSRAHLFFECQFS 191



 Score = 28.5 bits (62), Expect(2) = 2e-06
 Identities = 10/22 (45%), Positives = 14/22 (63%)
 Frame = +1

Query: 205 LLHLFIACATYAIWKERNDRIH 270
           ++ L      YAIW+ERN R+H
Sbjct: 229 IIRLAFHSCVYAIWRERNQRLH 250