BLASTX nr result

ID: Bupleurum21_contig00028376 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00028376
         (343 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002314965.1| predicted protein [Populus trichocarpa] gi|2...    76   3e-12
ref|XP_002519254.1| conserved hypothetical protein [Ricinus comm...    73   2e-11
ref|XP_002312314.1| predicted protein [Populus trichocarpa] gi|2...    72   4e-11
ref|XP_002273418.1| PREDICTED: uncharacterized protein LOC100267...    68   7e-10
gb|AFK46337.1| unknown [Medicago truncatula]                           65   7e-09

>ref|XP_002314965.1| predicted protein [Populus trichocarpa] gi|222864005|gb|EEF01136.1|
           predicted protein [Populus trichocarpa]
          Length = 202

 Score = 75.9 bits (185), Expect = 3e-12
 Identities = 49/107 (45%), Positives = 59/107 (55%)
 Frame = -3

Query: 341 DAADQKLIKEFAQLAMMKRARNERMXXXXXXXXXXXXXXXSGNLFAMLFTVIFCLVILFQ 162
           DAADQKLIKE ++LAM+KRAR ERM                 NLFAM+FT++FCLVILFQ
Sbjct: 93  DAADQKLIKEISELAMLKRARIERMKALKKVKATKASSN--SNLFAMVFTILFCLVILFQ 150

Query: 161 GMXXXXXXXXXXXSPESARVVEDGSILNANPWKPSTSVTELHSSVSP 21
           GM           SP S+   +DG I       PS+S +    S SP
Sbjct: 151 GMSSRATSTNSLGSPLSSEAADDGLISVQYFGNPSSSESNGPGSGSP 197


>ref|XP_002519254.1| conserved hypothetical protein [Ricinus communis]
           gi|223541569|gb|EEF43118.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 244

 Score = 73.2 bits (178), Expect = 2e-11
 Identities = 48/111 (43%), Positives = 57/111 (51%)
 Frame = -3

Query: 341 DAADQKLIKEFAQLAMMKRARNERMXXXXXXXXXXXXXXXSGNLFAMLFTVIFCLVILFQ 162
           DAADQKLIKE  +LAM+KRAR ERM                GN+FAM+FT +FCLVI+FQ
Sbjct: 120 DAADQKLIKEITELAMLKRARVERMKALKKMKAAKGSPSN-GNIFAMVFTALFCLVIIFQ 178

Query: 161 GMXXXXXXXXXXXSPESARVVEDGSILNANPWKPSTSVTELHSSVSPNSAE 9
           GM           +P SA     G I       PS S      S SP+S +
Sbjct: 179 GMSSRVSPVNVQGTPISAETAASGLIAVQYFGNPSASDPISLGSGSPSSVK 229


>ref|XP_002312314.1| predicted protein [Populus trichocarpa] gi|222852134|gb|EEE89681.1|
           predicted protein [Populus trichocarpa]
          Length = 235

 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 48/112 (42%), Positives = 58/112 (51%)
 Frame = -3

Query: 341 DAADQKLIKEFAQLAMMKRARNERMXXXXXXXXXXXXXXXSGNLFAMLFTVIFCLVILFQ 162
           DAADQKLIKE ++LAM+KRAR ERM                 N+FA++ T++FCLVILFQ
Sbjct: 112 DAADQKLIKEISELAMLKRARIERMKALKKLKATKPSSN--NNIFAIVLTILFCLVILFQ 169

Query: 161 GMXXXXXXXXXXXSPESARVVEDGSILNANPWKPSTSVTELHSSVSPNSAET 6
           GM           SP S+    DG I       PS S +    S  PN  ET
Sbjct: 170 GMSSRATSASSMGSPVSSETAGDGLISVQYFGNPSASESNGPGSGYPNFIET 221


>ref|XP_002273418.1| PREDICTED: uncharacterized protein LOC100267130 [Vitis vinifera]
           gi|296083220|emb|CBI22856.3| unnamed protein product
           [Vitis vinifera]
          Length = 223

 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 49/112 (43%), Positives = 59/112 (52%), Gaps = 1/112 (0%)
 Frame = -3

Query: 341 DAADQKLIKEFAQLAMMKRARNERMXXXXXXXXXXXXXXXSGNLFAMLFTVIFCLVILFQ 162
           DAADQKL++E A+LAM+KRAR ER                + +LFAM+FTV FCLVILFQ
Sbjct: 98  DAADQKLVREIAELAMLKRARVER--RKALRKMKVAKASSNSSLFAMVFTVFFCLVILFQ 155

Query: 161 GM-XXXXXXXXXXXSPESARVVEDGSILNANPWKPSTSVTELHSSVSPNSAE 9
           G+            SPESA   E G I        S S  + H S SP+  E
Sbjct: 156 GLSSRRNSAITFHGSPESAAPTEGGLISVQYYHSISPSDVKEHGSESPSLVE 207


>gb|AFK46337.1| unknown [Medicago truncatula]
          Length = 241

 Score = 64.7 bits (156), Expect = 7e-09
 Identities = 34/62 (54%), Positives = 42/62 (67%)
 Frame = -3

Query: 341 DAADQKLIKEFAQLAMMKRARNERMXXXXXXXXXXXXXXXSGNLFAMLFTVIFCLVILFQ 162
           DAADQKLI+E  QLAM+KRAR ERM               S ++FAM+ TV+FC+VILFQ
Sbjct: 118 DAADQKLIREITQLAMLKRARVERMKALKKMKAAKASSSPSSSMFAMVCTVVFCIVILFQ 177

Query: 161 GM 156
           G+
Sbjct: 178 GI 179


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