BLASTX nr result

ID: Bupleurum21_contig00028363 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00028363
         (263 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002530188.1| conserved hypothetical protein [Ricinus comm...    61   8e-08
ref|XP_004147091.1| PREDICTED: F-box/LRR-repeat protein At4g2942...    56   3e-06

>ref|XP_002530188.1| conserved hypothetical protein [Ricinus communis]
           gi|223530307|gb|EEF32202.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 460

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 29/74 (39%), Positives = 51/74 (68%)
 Frame = +3

Query: 42  SSITVFAPNLTKLELECDDPITLSIHAPLVSYFHFALERADVFNVEKFKTLKTLRLVSSI 221
           +S+++FAPNL KLEL C +P +L +  PL+S F+ ++ +A+ F V++   LK L+L S+ 
Sbjct: 241 NSLSIFAPNLLKLELNCIEPRSLILETPLLSDFYLSIRKANKFKVKQLHDLKILQLESTD 300

Query: 222 LYYVLFTFPSSTIV 263
           +  ++  FPS++ V
Sbjct: 301 ILSLIRLFPSNSSV 314


>ref|XP_004147091.1| PREDICTED: F-box/LRR-repeat protein At4g29420-like [Cucumis
           sativus] gi|449503313|ref|XP_004161940.1| PREDICTED:
           F-box/LRR-repeat protein At4g29420-like [Cucumis
           sativus]
          Length = 449

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 29/70 (41%), Positives = 44/70 (62%)
 Frame = +3

Query: 45  SITVFAPNLTKLELECDDPITLSIHAPLVSYFHFALERADVFNVEKFKTLKTLRLVSSIL 224
           S+ ++AP+L+KLEL+C  P  L I  P++S FHF LE A    V++F  L+ L L    L
Sbjct: 237 SLCIYAPSLSKLELKCVKPKFLIIETPMLSDFHFCLEDASGLQVDEFPCLRKLHLHFPRL 296

Query: 225 YYVLFTFPSS 254
           + ++ TF S+
Sbjct: 297 HSLITTFSSA 306


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