BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00028357
         (753 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002301440.1| predicted protein [Populus trichocarpa] gi|2...   238   6e-77
ref|XP_003614316.1| Pentatricopeptide repeat-containing protein ...   233   9e-74
ref|XP_003534128.1| PREDICTED: pentatricopeptide repeat-containi...   229   2e-73
ref|XP_002515072.1| pentatricopeptide repeat-containing protein,...   249   3e-64
ref|XP_003619886.1| Pentatricopeptide repeat-containing protein ...   189   1e-60

>ref|XP_002301440.1| predicted protein [Populus trichocarpa] gi|222843166|gb|EEE80713.1|
           predicted protein [Populus trichocarpa]
          Length = 503

 Score =  238 bits (607), Expect(2) = 6e-77
 Identities = 116/166 (69%), Positives = 138/166 (83%)
 Frame = -2

Query: 641 MNVIWPRLLTPTHLSQLIRKQKSPVKALQIFNEARLKYPNYRHNGPVYATMISILGSSGR 462
           M++ WPRLLTPT LSQ++R QK+P+ ALQIF +A+ KYP+Y HNGPVYATMISILG+S R
Sbjct: 1   MSIRWPRLLTPTQLSQILRSQKNPLTALQIFKDAKDKYPSYHHNGPVYATMISILGNSDR 60

Query: 461 MGDMKTVIDQMKADSCEFRDSVFATAIKTYAKAGLLDEAFSLFQNLHKFNCVNWTESFNT 282
           + +MK VIDQM+ DSCE +DSVF TAIKTYA AG + EA SLF+N+ KFNCVNWTESFNT
Sbjct: 61  IAEMKEVIDQMRDDSCECKDSVFVTAIKTYASAGQISEAVSLFKNIPKFNCVNWTESFNT 120

Query: 281 LLDIMISESKLETAHRLFLEHSYGWEVKSRTRSLTLLACLSMLCVR 144
           LL I++ ESKLETAHR FLE+S GWEVKSR R+L LL  L +LC R
Sbjct: 121 LLQILVKESKLETAHRFFLENSCGWEVKSRIRALNLL--LDVLCQR 164



 Score = 76.3 bits (186), Expect(2) = 6e-77
 Identities = 34/56 (60%), Positives = 45/56 (80%)
 Frame = -1

Query: 168 LLIHALCQRGRSDLALHVFLEMNSQCCSPSKETFRFLMKRLCADGRLDDATHLLYS 1
           LL+  LCQR RSDLAL +F EM+ Q C P+++++R LM+ LC DGRL++ATHLLYS
Sbjct: 156 LLLDVLCQRNRSDLALQIFQEMDYQGCYPNRDSYRILMRGLCEDGRLNEATHLLYS 211


>ref|XP_003614316.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355515651|gb|AES97274.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 504

 Score =  233 bits (594), Expect(2) = 9e-74
 Identities = 107/159 (67%), Positives = 139/159 (87%)
 Frame = -2

Query: 647 ISMNVIWPRLLTPTHLSQLIRKQKSPVKALQIFNEARLKYPNYRHNGPVYATMISILGSS 468
           +SM++ WPR+L PT+L+Q+IR QK+P+KAL+IFNEA+LKYP Y HNGPVYATMI+ILG+S
Sbjct: 1   MSMSIRWPRVLNPTYLTQIIRTQKNPLKALEIFNEAKLKYPKYSHNGPVYATMINILGTS 60

Query: 467 GRMGDMKTVIDQMKADSCEFRDSVFATAIKTYAKAGLLDEAFSLFQNLHKFNCVNWTESF 288
           GR+ +M  +I+QMK DSCE +DSVF +AIKTYAK GL+DEA SL++N+ +FNCVNWT+SF
Sbjct: 61  GRLKEMSDLIEQMKEDSCECKDSVFVSAIKTYAKEGLVDEAISLYKNIPQFNCVNWTQSF 120

Query: 287 NTLLDIMISESKLETAHRLFLEHSYGWEVKSRTRSLTLL 171
           NTLL+IM++E+KLE AH LF+E S GWEVKSR ++L LL
Sbjct: 121 NTLLEIMVNENKLEDAHSLFVESSCGWEVKSRVQALNLL 159



 Score = 70.5 bits (171), Expect(2) = 9e-74
 Identities = 32/56 (57%), Positives = 44/56 (78%)
 Frame = -1

Query: 168 LLIHALCQRGRSDLALHVFLEMNSQCCSPSKETFRFLMKRLCADGRLDDATHLLYS 1
           LL++ALC++ RSDLAL +F EM+ Q C P++E++  +MK LC D RL +ATHLLYS
Sbjct: 158 LLMYALCRKSRSDLALQIFQEMDYQGCYPNRESYLIVMKGLCQDKRLHEATHLLYS 213


>ref|XP_003534128.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g05600-like [Glycine max]
          Length = 502

 Score =  229 bits (585), Expect(2) = 2e-73
 Identities = 105/157 (66%), Positives = 135/157 (85%)
 Frame = -2

Query: 641 MNVIWPRLLTPTHLSQLIRKQKSPVKALQIFNEARLKYPNYRHNGPVYATMISILGSSGR 462
           M++ WPR+LTPT+LSQ+I+ QK+P+KAL IFNEA+ +YPNY HNGPVYATMISILG+SGR
Sbjct: 1   MSIRWPRVLTPTYLSQIIKTQKNPLKALNIFNEAKSRYPNYYHNGPVYATMISILGTSGR 60

Query: 461 MGDMKTVIDQMKADSCEFRDSVFATAIKTYAKAGLLDEAFSLFQNLHKFNCVNWTESFNT 282
           + +M+ VI+QMK DSCE +DSVF + IKTYA AGL+DEA SL++++ +FNCVNWTESFNT
Sbjct: 61  LNEMRDVIEQMKEDSCECKDSVFVSVIKTYANAGLVDEAISLYKSIPRFNCVNWTESFNT 120

Query: 281 LLDIMISESKLETAHRLFLEHSYGWEVKSRTRSLTLL 171
           +L IM+ E++LE AHRLF+E S GWEV+S  R+L LL
Sbjct: 121 MLQIMVKENRLEIAHRLFVESSCGWEVRSLVRALNLL 157



 Score = 72.8 bits (177), Expect(2) = 2e-73
 Identities = 34/63 (53%), Positives = 46/63 (73%)
 Frame = -1

Query: 189 SFLDLAGLLIHALCQRGRSDLALHVFLEMNSQCCSPSKETFRFLMKRLCADGRLDDATHL 10
           S +    LL++ALCQ+ RSDLAL +F EM+ Q C P+++++  LMK LC D RL +ATHL
Sbjct: 149 SLVRALNLLMYALCQKSRSDLALQLFQEMDYQSCYPNRDSYAILMKGLCQDRRLHEATHL 208

Query: 9   LYS 1
           LYS
Sbjct: 209 LYS 211


>ref|XP_002515072.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223545552|gb|EEF47056.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 504

 Score =  249 bits (637), Expect = 3e-64
 Identities = 121/164 (73%), Positives = 140/164 (85%)
 Frame = -2

Query: 641 MNVIWPRLLTPTHLSQLIRKQKSPVKALQIFNEARLKYPNYRHNGPVYATMISILGSSGR 462
           M V WPRLLTPTHLSQ+IR QK+P+ AL+IF EA+ KYPNYRHNGPVYATMI ILGSSGR
Sbjct: 1   MTVRWPRLLTPTHLSQIIRNQKNPLIALRIFKEAKDKYPNYRHNGPVYATMIGILGSSGR 60

Query: 461 MGDMKTVIDQMKADSCEFRDSVFATAIKTYAKAGLLDEAFSLFQNLHKFNCVNWTESFNT 282
           + +MK V+DQM+ DSCE +DS+FA AIKTYA+ GLL+EA SLF+N+ +FNCVNWTESFNT
Sbjct: 61  ITEMKEVLDQMREDSCECKDSIFANAIKTYARVGLLNEAISLFKNIPQFNCVNWTESFNT 120

Query: 281 LLDIMISESKLETAHRLFLEHSYGWEVKSRTRSLTLLACLSMLC 150
           LL IM+ ESKLE AHRLFLE SYGWEVKSR RSL LL  + +LC
Sbjct: 121 LLQIMVKESKLEAAHRLFLESSYGWEVKSRVRSLNLL--MDVLC 162



 Score = 72.8 bits (177), Expect = 7e-11
 Identities = 36/69 (52%), Positives = 47/69 (68%)
 Frame = -1

Query: 207 GGEISNSFLDLAGLLIHALCQRGRSDLALHVFLEMNSQCCSPSKETFRFLMKRLCADGRL 28
           G E+ +    L  LL+  LCQ  RSD+AL VF EMN Q C P ++++R +M  LC DGRL
Sbjct: 144 GWEVKSRVRSL-NLLMDVLCQHNRSDVALQVFQEMNYQGCYPDRDSYRIVMMGLCKDGRL 202

Query: 27  DDATHLLYS 1
           ++ATHLLYS
Sbjct: 203 NEATHLLYS 211


>ref|XP_003619886.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355494901|gb|AES76104.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 576

 Score =  189 bits (481), Expect(2) = 1e-60
 Identities = 92/157 (58%), Positives = 120/157 (76%)
 Frame = -2

Query: 641 MNVIWPRLLTPTHLSQLIRKQKSPVKALQIFNEARLKYPNYRHNGPVYATMISILGSSGR 462
           M++ WPR+L PT+L+Q+IR QK+P+KAL+IFNEA+ KYPNY HNGPVYATMI+ILG+SGR
Sbjct: 1   MSIRWPRVLNPTYLTQIIRTQKNPLKALEIFNEAKSKYPNYSHNGPVYATMINILGTSGR 60

Query: 461 MGDMKTVIDQMKADSCEFRDSVFATAIKTYAKAGLLDEAFSLFQNLHKFNCVNWTESFNT 282
           + +M  +I+QMK DS                   L+DEA SL++N+ +FNCVNWT+SFNT
Sbjct: 61  LKEMSDLIEQMKEDS------------------WLVDEAISLYKNIPQFNCVNWTQSFNT 102

Query: 281 LLDIMISESKLETAHRLFLEHSYGWEVKSRTRSLTLL 171
           LL IM++E+KLE AH LF+E S GWEVKSR ++L LL
Sbjct: 103 LLKIMVNENKLEDAHSLFVESSCGWEVKSRVQALNLL 139



 Score = 70.5 bits (171), Expect(2) = 1e-60
 Identities = 32/56 (57%), Positives = 44/56 (78%)
 Frame = -1

Query: 168 LLIHALCQRGRSDLALHVFLEMNSQCCSPSKETFRFLMKRLCADGRLDDATHLLYS 1
           LL++ALC++ RSDLAL +F EM+ Q C P++E++  +MK LC D RL +ATHLLYS
Sbjct: 138 LLMYALCRKSRSDLALQIFQEMDYQDCYPNRESYLIVMKGLCQDKRLHEATHLLYS 193