BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00028351
         (612 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAX95955.1| retrotransposon protein, putative, Ty3-gypsy sub-...    69   9e-10
emb|CAN77145.1| hypothetical protein VITISV_038340 [Vitis vinifera]    67   2e-09
gb|AAL91601.1|AC099400_7 Putative gag-pol precursor [Oryza sativ...    65   7e-09
gb|AAP51765.2| retrotransposon protein, putative, Ty3-gypsy subc...    65   7e-09
emb|CAN67948.1| hypothetical protein VITISV_002484 [Vitis vinifera]    65   1e-08

>gb|AAX95955.1| retrotransposon protein, putative, Ty3-gypsy sub-class [Oryza
           sativa Japonica Group] gi|77550301|gb|ABA93098.1|
           retrotransposon protein, putative, Ty3-gypsy subclass
           [Oryza sativa Japonica Group]
          Length = 1731

 Score = 68.6 bits (166), Expect = 9e-10
 Identities = 51/192 (26%), Positives = 85/192 (44%)
 Frame = -3

Query: 601 ESLADYLVRFRKGCEEVAEIDEKLAMGALQAGLHIDKAEKLIETFEFYPPENLNDMLRRA 422
           ESL DY+ RF + C ++++I + + + A   G+   + E L+  F   PP  +  M  +A
Sbjct: 438 ESLRDYIRRFSEQCNKISDITDDVIIAAFTKGI---RHEDLVGKFGRKPPRTVKQMFEKA 494

Query: 421 EGHRRREEVMQNRRDVTRREDAQAYGKGKTRSPRRDRSPKKDWSPARGDRGSGQQLTNSQ 242
             + + E+ +     +  ++ +  +             PKKD +P  G  GS    TN +
Sbjct: 495 NEYAKDEDAI-----IASKQSSTTW------------KPKKD-TPTTGGSGS----TNRK 532

Query: 241 KNKRKREETVFTPLNESRSRILNEIKSRPGYYPPKKQRVPMDKKNVKKFCAYHEETGHST 62
             KRK EE V T  + SR R                 RV    K +   C +H  + H+T
Sbjct: 533 DRKRKPEELVATTTHSSRQR----------------SRVNTFDKIMNSQCPHHPNSNHAT 576

Query: 61  EDCFNLKKLIEK 26
           +DCF  K++ E+
Sbjct: 577 KDCFVYKQIAEQ 588


>emb|CAN77145.1| hypothetical protein VITISV_038340 [Vitis vinifera]
          Length = 539

 Score = 67.4 bits (163), Expect = 2e-09
 Identities = 55/200 (27%), Positives = 91/200 (45%)
 Frame = -3

Query: 604 DESLADYLVRFRKGCEEVAEIDEKLAMGALQAGLHIDKAEKLIETFEFYPPENLNDMLRR 425
           +ESL +++ RF +   +V      + +   +    I  +    E+    PP  ++D+ RR
Sbjct: 103 NESLREFVKRFDQAVLQVEAYSMDVVLQIFKRS--ICPSTPFFESLAKKPPTTMDDLFRR 160

Query: 424 AEGHRRREEVMQNRRDVTRREDAQAYGKGKTRSPRRDRSPKKDWSPARGDRGSGQQLTNS 245
           A  +   E       D  R    Q    G+T     +RS K    P    R SG++    
Sbjct: 161 ASKYSMLE-------DDVRAATQQILVAGQTSRSDAERSSKLPDRP----RPSGRR---- 205

Query: 244 QKNKRKREETVFTPLNESRSRILNEIKSRPGYYPPKKQRVPMDKKNVKKFCAYHEETGHS 65
           Q+ + + E   FTPL+ S  + +  I+    +  P   R    K++  K CAYH+E GH+
Sbjct: 206 QEEQSRLELPPFTPLSVSYEKFIPMIQDLSDFRWPGPIRTDPAKRDHSKKCAYHKEHGHT 265

Query: 64  TEDCFNLKKLIEKLIQQGEL 5
           TE C +L  L+E++I+ G L
Sbjct: 266 TERCRSLHYLVERVIKVGHL 285


>gb|AAL91601.1|AC099400_7 Putative gag-pol precursor [Oryza sativa Japonica Group]
          Length = 1416

 Score = 65.5 bits (158), Expect = 7e-09
 Identities = 50/192 (26%), Positives = 79/192 (41%)
 Frame = -3

Query: 601 ESLADYLVRFRKGCEEVAEIDEKLAMGALQAGLHIDKAEKLIETFEFYPPENLNDMLRRA 422
           ESL DY+ RF + C +++ I + + + A   G+   + E L+  F   PP  +  M  +A
Sbjct: 441 ESLRDYIRRFSEQCNKISNITDDVIIAAFTKGI---RHEDLVGKFGHKPPRTVKQMFEKA 497

Query: 421 EGHRRREEVMQNRRDVTRREDAQAYGKGKTRSPRRDRSPKKDWSPARGDRGSGQQLTNSQ 242
             + + E+ +   +             G T  P++D       +PA G+RGS     N +
Sbjct: 498 NEYAKAEDAITVSKQ-----------SGTTWKPKKD-------TPAVGERGS----NNHK 535

Query: 241 KNKRKREETVFTPLNESRSRILNEIKSRPGYYPPKKQRVPMDKKNVKKFCAYHEETGHST 62
             K K EE V T    SR R                 R+    K +   C +H  + H  
Sbjct: 536 DRKSKPEELVATTTPSSRQR----------------SRINTFDKIMNSQCPHHPNSNHVA 579

Query: 61  EDCFNLKKLIEK 26
           +DCF  KK  E+
Sbjct: 580 KDCFIYKKFAEQ 591


>gb|AAP51765.2| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
           Japonica Group]
          Length = 1416

 Score = 65.5 bits (158), Expect = 7e-09
 Identities = 50/192 (26%), Positives = 79/192 (41%)
 Frame = -3

Query: 601 ESLADYLVRFRKGCEEVAEIDEKLAMGALQAGLHIDKAEKLIETFEFYPPENLNDMLRRA 422
           ESL DY+ RF + C +++ I + + + A   G+   + E L+  F   PP  +  M  +A
Sbjct: 441 ESLRDYIRRFSEQCNKISNITDDVIIAAFTKGI---RHEDLVGKFGHKPPRTVKQMFEKA 497

Query: 421 EGHRRREEVMQNRRDVTRREDAQAYGKGKTRSPRRDRSPKKDWSPARGDRGSGQQLTNSQ 242
             + + E+ +   +             G T  P++D       +PA G+RGS     N +
Sbjct: 498 NEYAKAEDAITVSKQ-----------SGTTWKPKKD-------TPAVGERGS----NNHK 535

Query: 241 KNKRKREETVFTPLNESRSRILNEIKSRPGYYPPKKQRVPMDKKNVKKFCAYHEETGHST 62
             K K EE V T    SR R                 R+    K +   C +H  + H  
Sbjct: 536 DRKSKPEELVATTTPSSRQR----------------SRINTFDKIMNSQCPHHPNSNHVA 579

Query: 61  EDCFNLKKLIEK 26
           +DCF  KK  E+
Sbjct: 580 KDCFIYKKFAEQ 591


>emb|CAN67948.1| hypothetical protein VITISV_002484 [Vitis vinifera]
          Length = 484

 Score = 65.1 bits (157), Expect = 1e-08
 Identities = 53/200 (26%), Positives = 85/200 (42%)
 Frame = -3

Query: 604 DESLADYLVRFRKGCEEVAEIDEKLAMGALQAGLHIDKAEKLIETFEFYPPENLNDMLRR 425
           +ESL +++ RF +   +V        +   +    I       E+    PP  +ND+ R 
Sbjct: 113 NESLREFVKRFGQAVLQVEAYSMDAVLQIFKRS--ICPGTPFFESLAKKPPTTMNDLFRH 170

Query: 424 AEGHRRREEVMQNRRDVTRREDAQAYGKGKTRSPRRDRSPKKDWSPARGDRGSGQQLTNS 245
           A  +   E       D  R    Q     +T     +RS K    P        +  +  
Sbjct: 171 ASKYSMLE-------DDVRATTQQILVAEQTSRSGAERSAKPPDRP--------RSFSRR 215

Query: 244 QKNKRKREETVFTPLNESRSRILNEIKSRPGYYPPKKQRVPMDKKNVKKFCAYHEETGHS 65
           Q+ + + E    TPL+ S  ++L  I++   +  P   R    K++  K CAYH+E GH+
Sbjct: 216 QEEQSRLELPPLTPLSISYEKLLPMIQNMFDFRWPGPLRADPSKRDHSKKCAYHKEHGHT 275

Query: 64  TEDCFNLKKLIEKLIQQGEL 5
           TE C +L  L+EKLI+ G L
Sbjct: 276 TETCKSLHYLVEKLIRAGHL 295