BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00028342
         (632 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003635424.1| PREDICTED: LOW QUALITY PROTEIN: putative rib...    55   1e-08
ref|XP_002531249.1| hypothetical protein RCOM_0494170 [Ricinus c...    47   2e-08
ref|XP_002532007.1| conserved hypothetical protein [Ricinus comm...    51   4e-08
ref|XP_002531759.1| conserved hypothetical protein [Ricinus comm...    45   4e-08
emb|CAN76892.1| hypothetical protein VITISV_005356 [Vitis vinifera]    52   2e-06

>ref|XP_003635424.1| PREDICTED: LOW QUALITY PROTEIN: putative ribonuclease H protein
           At1g65750-like [Vitis vinifera]
          Length = 820

 Score = 55.1 bits (131), Expect(2) = 1e-08
 Identities = 30/86 (34%), Positives = 44/86 (51%)
 Frame = +2

Query: 317 VLVESDCQKVVHAIRSSVLLTFTFGLVISDWKVLLLELNDVSVYFIKRSANKVAHYVARE 496
           ++VE+DC +VV AI+       +FG +I D   +L  L DV V + +RSAN  AH +A  
Sbjct: 735 IVVETDCLRVVQAIQHKSCPNTSFGFIIVDCLDVLQHLVDVQVVYARRSANSAAHCLANG 794

Query: 497 ACLCPDCHYTESNAPAAVLTLCVIDI 574
           AC     H      P  +L+    D+
Sbjct: 795 ACSFTSLHIWGYTPPQCILSCLHYDV 820



 Score = 30.0 bits (66), Expect(2) = 1e-08
 Identities = 25/89 (28%), Positives = 35/89 (39%), Gaps = 3/89 (3%)
 Frame = +3

Query: 57  SQHSQWSFTSRGMDLSNEQTAVTSDQGEL*CLGF*Y*RKGWYWFGIVVRNHLGELVMAKG 236
           S  S+W     G    N   AV  D+G +               G V R+H G  +    
Sbjct: 659 SYSSKWQKPDYGWIKINVDGAVFPDKGAI---------------GAVFRDHQGRFMGGFA 703

Query: 237 QG---PISPDLAEALGMKEALSWINITGR 314
           +       P + EALG++E LSWI+   R
Sbjct: 704 KPFPHQTLPKVVEALGVREVLSWIHERSR 732


>ref|XP_002531249.1| hypothetical protein RCOM_0494170 [Ricinus communis]
           gi|223529168|gb|EEF31146.1| hypothetical protein
           RCOM_0494170 [Ricinus communis]
          Length = 329

 Score = 46.6 bits (109), Expect(2) = 2e-08
 Identities = 27/64 (42%), Positives = 39/64 (60%)
 Frame = +2

Query: 314 HVLVESDCQKVVHAIRSSVLLTFTFGLVISDWKVLLLELNDVSVYFIKRSANKVAHYVAR 493
           +V+ E D + VV A+ S     F FG VI+D ++LL    + SV FI++ AN VAH +AR
Sbjct: 240 NVIFEYDAKVVVDAVLSGAADLFEFGAVIADCRLLLQHGCNYSVQFIRKQANLVAHSLAR 299

Query: 494 EACL 505
            + L
Sbjct: 300 ASHL 303



 Score = 37.7 bits (86), Expect(2) = 2e-08
 Identities = 20/46 (43%), Positives = 29/46 (63%), Gaps = 3/46 (6%)
 Frame = +3

Query: 186 FGIVVRNHLGELVM-AKGQGP--ISPDLAEALGMKEALSWINITGR 314
           FG+V+R+  G  VM A G  P   +  LAEA+G++EA+ W+   GR
Sbjct: 193 FGMVIRDSAGSFVMGADGSSPGLFNVKLAEAIGLREAVQWVLSLGR 238


>ref|XP_002532007.1| conserved hypothetical protein [Ricinus communis]
           gi|223528338|gb|EEF30380.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 273

 Score = 50.8 bits (120), Expect(2) = 4e-08
 Identities = 24/60 (40%), Positives = 38/60 (63%)
 Frame = +2

Query: 314 HVLVESDCQKVVHAIRSSVLLTFTFGLVISDWKVLLLELNDVSVYFIKRSANKVAHYVAR 493
           +V+ ESDC  +V+A+    + +  FGL+I D +  L E+N   + F+KR  N+VAH +AR
Sbjct: 201 YVVSESDCLTLVNAVNKVGVNSSLFGLLIGDCRSFLKEMNHAHIVFVKRFGNRVAHLLAR 260



 Score = 32.3 bits (72), Expect(2) = 4e-08
 Identities = 15/41 (36%), Positives = 22/41 (53%), Gaps = 3/41 (7%)
 Frame = +3

Query: 186 FGIVVRNHLGELVMAKG---QGPISPDLAEALGMKEALSWI 299
           FG + +N  G    A      GP+ P +AEAL ++E L W+
Sbjct: 154 FGFIFQNDSGTFRAATNGLISGPLDPQVAEALSLREDLCWV 194


>ref|XP_002531759.1| conserved hypothetical protein [Ricinus communis]
           gi|223528595|gb|EEF30615.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 163

 Score = 44.7 bits (104), Expect(3) = 4e-08
 Identities = 23/60 (38%), Positives = 36/60 (60%)
 Frame = +2

Query: 314 HVLVESDCQKVVHAIRSSVLLTFTFGLVISDWKVLLLELNDVSVYFIKRSANKVAHYVAR 493
           +V+ E DC  +V A+        + GL+I D K+L   +++ S  F+KRS N+VAH +AR
Sbjct: 100 NVVFELDCLHIVEALLRKGTDRSSLGLIIKDCKLLSSSISNCSFAFVKRSRNEVAHKLAR 159



 Score = 31.6 bits (70), Expect(3) = 4e-08
 Identities = 16/39 (41%), Positives = 23/39 (58%), Gaps = 3/39 (7%)
 Frame = +3

Query: 189 GIVVRNHLGELVMAKG---QGPISPDLAEALGMKEALSW 296
           G V+++H G  V A      G   P++AE L ++EALSW
Sbjct: 54  GCVMKDHAGLFVCAMAVSFAGAYIPEIAEGLAIQEALSW 92



 Score = 26.2 bits (56), Expect(3) = 4e-08
 Identities = 11/29 (37%), Positives = 17/29 (58%)
 Frame = +1

Query: 109 NKPPSQVIKVNFDASVFNIEGKAGIGLVL 195
           N P    +KVN DA++F+     G+G V+
Sbjct: 29  NTPSLGSMKVNMDATIFSNPDSMGVGCVM 57


>emb|CAN76892.1| hypothetical protein VITISV_005356 [Vitis vinifera]
          Length = 1793

 Score = 51.6 bits (122), Expect(2) = 2e-06
 Identities = 29/86 (33%), Positives = 44/86 (51%)
 Frame = +2

Query: 317  VLVESDCQKVVHAIRSSVLLTFTFGLVISDWKVLLLELNDVSVYFIKRSANKVAHYVARE 496
            ++VE+DC  VV AI+       +FG +I+D   +L  L DV V + +RSAN  AH +A+ 
Sbjct: 1708 IVVETDCLLVVQAIQHKSCPNMSFGFIIADCLDVLQHLVDVQVVYARRSANSAAHCLAKG 1767

Query: 497  ACLCPDCHYTESNAPAAVLTLCVIDI 574
            A      H      P  +L+    D+
Sbjct: 1768 AGSFTSLHIWGYTPPQCILSCLHYDV 1793



 Score = 25.8 bits (55), Expect(2) = 2e-06
 Identities = 10/20 (50%), Positives = 15/20 (75%)
 Frame = +3

Query: 255  DLAEALGMKEALSWINITGR 314
            ++ EALG++E LSWI+   R
Sbjct: 1686 EVVEALGVREVLSWIHERSR 1705