BLASTX nr result

ID: Bupleurum21_contig00028298 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00028298
         (351 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI34319.3| unnamed protein product [Vitis vinifera]               72   5e-11
ref|XP_004157268.1| PREDICTED: uncharacterized LOC101213254 [Cuc...    66   3e-09
ref|XP_004135797.1| PREDICTED: uncharacterized protein LOC101213...    66   3e-09
ref|XP_002512308.1| conserved hypothetical protein [Ricinus comm...    62   5e-08

>emb|CBI34319.3| unnamed protein product [Vitis vinifera]
          Length = 340

 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 50/118 (42%), Positives = 61/118 (51%), Gaps = 7/118 (5%)
 Frame = -2

Query: 335 ASGAARRRNTLKRVDRELLKGNYRAAISLVKS-----AGLRGFGAAKQI-QSFEDLSIQT 174
           A  AARRR +LK VDREL KGNY+ A+SLVK       GLRGFGAAKQ+    +DL +  
Sbjct: 61  AGNAARRRRSLKMVDRELSKGNYKTAVSLVKQLNGKPGGLRGFGAAKQVSHRLDDLKLH- 119

Query: 173 SDIASLQTLLDSVLDSIRNSICFTXXXXXXXXXXXXLM-HRKSEDFLLNDHLKCMQHE 3
               SLQ+L+DS+LD +     F              M    +E     DH    QHE
Sbjct: 120 ---ESLQSLVDSILDLMEKCRQFAMLDEVSVKALEKSMPDEGNESHCDEDHFLYTQHE 174


>ref|XP_004157268.1| PREDICTED: uncharacterized LOC101213254 [Cucumis sativus]
          Length = 319

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 38/81 (46%), Positives = 51/81 (62%), Gaps = 9/81 (11%)
 Frame = -2

Query: 326 AARRRNTLKRVDRELLKGNYRAAISLVKSA-----GLRGFGAAKQI----QSFEDLSIQT 174
           +A+RR  LK VDR L K  Y++A+SLVK       GLRGFGAAKQI       ++  +  
Sbjct: 29  SAKRRRALKLVDRALSKRQYKSAVSLVKQLQGKPYGLRGFGAAKQIIKKRLELDESEVNR 88

Query: 173 SDIASLQTLLDSVLDSIRNSI 111
            DI SLQ L+DS+LDS++  +
Sbjct: 89  MDILSLQPLVDSILDSVQQCL 109


>ref|XP_004135797.1| PREDICTED: uncharacterized protein LOC101213254 [Cucumis sativus]
          Length = 319

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 38/81 (46%), Positives = 51/81 (62%), Gaps = 9/81 (11%)
 Frame = -2

Query: 326 AARRRNTLKRVDRELLKGNYRAAISLVKSA-----GLRGFGAAKQI----QSFEDLSIQT 174
           +A+RR  LK VDR L K  Y++A+SLVK       GLRGFGAAKQI       ++  +  
Sbjct: 29  SAKRRRALKLVDRALSKRQYKSAVSLVKQLQGKPYGLRGFGAAKQIIKKRLELDESEVNR 88

Query: 173 SDIASLQTLLDSVLDSIRNSI 111
            DI SLQ L+DS+LDS++  +
Sbjct: 89  MDILSLQPLVDSILDSVQQCL 109


>ref|XP_002512308.1| conserved hypothetical protein [Ricinus communis]
           gi|223548269|gb|EEF49760.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 287

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 37/82 (45%), Positives = 51/82 (62%), Gaps = 9/82 (10%)
 Frame = -2

Query: 335 ASGAARRRNTLKRVDRELLKGNYRAAISLV-----KSAGLRGFGAAKQIQ----SFEDLS 183
           A  A RRR +L+RVDREL KGN++ A+SLV     K  GLRGFGAAKQ+     + +   
Sbjct: 25  ADYAIRRRKSLQRVDRELSKGNFKDALSLVNQLQGKPFGLRGFGAAKQVPKNRFALDRFE 84

Query: 182 IQTSDIASLQTLLDSVLDSIRN 117
              + ++  + L DSV++SI N
Sbjct: 85  FDGTCLSPFRALFDSVMNSIEN 106


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