BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00028277
         (309 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_006607893.1| transcriptional transactivator [Soybean Putn...    66   3e-09
ref|YP_006907835.1| inclusion body matrix protein [Horseradish l...    56   1e-06
ref|YP_001931968.1| inclusion body/transactivation factor [Eupat...    57   2e-06
ref|NP_612578.1| Inclusion body matrix protein [Carnation etched...    52   3e-06
emb|CAH68830.1| inclusion body matrix protein [Carnation etched ...    52   4e-06

>ref|YP_006607893.1| transcriptional transactivator [Soybean Putnam virus]
           gi|401620161|gb|AFP95351.1| transcriptional
           transactivator [Soybean Putnam virus]
          Length = 534

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 29/56 (51%), Positives = 41/56 (73%)
 Frame = -3

Query: 169 EKIYTTDKTNISYINAYPNAPADIIFDAFVYGLLKVIYPSENLQEIQHFPKLFRSA 2
           E+ +TTD  N+SY N   N+  D +++AF YGL+++IYPS NLQE++ FPK F SA
Sbjct: 275 ERFFTTDNANVSYFNFLKNSHPDQVYEAFRYGLVRMIYPSNNLQELKSFPKGFVSA 330


>ref|YP_006907835.1| inclusion body matrix protein [Horseradish latent virus]
           gi|57790328|gb|AAW56090.1| inclusion body matrix protein
           [Horseradish latent virus]
          Length = 524

 Score = 56.2 bits (134), Expect(2) = 1e-06
 Identities = 27/53 (50%), Positives = 34/53 (64%)
 Frame = -3

Query: 160 YTTDKTNISYINAYPNAPADIIFDAFVYGLLKVIYPSENLQEIQHFPKLFRSA 2
           +TTDK NIS  N   NA   +I + F  GL+K IYPS NLQEI++ PK  + A
Sbjct: 269 FTTDKKNISMFNFLKNADPQMISECFQAGLIKTIYPSANLQEIKYLPKKIKDA 321



 Score = 21.2 bits (43), Expect(2) = 1e-06
 Identities = 7/16 (43%), Positives = 10/16 (62%)
 Frame = -2

Query: 212 QVMFEEFDYLYKYARK 165
           ++  E+F YLY   RK
Sbjct: 244 EITIEDFQYLYDLGRK 259


>ref|YP_001931968.1| inclusion body/transactivation factor [Eupatorium vein clearing
           virus] gi|172041765|gb|ACB69774.1| inclusion
           body/transactivation factor [Eupatorium vein clearing
           virus]
          Length = 462

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 24/49 (48%), Positives = 35/49 (71%)
 Frame = -3

Query: 166 KIYTTDKTNISYINAYPNAPADIIFDAFVYGLLKVIYPSENLQEIQHFP 20
           K +TTDK +IS  N  P A  +++++AF YGL+  IYP+ENL E++ FP
Sbjct: 267 KFFTTDKKDISMFNFVPGANPELVYEAFCYGLVSQIYPAENLLELRSFP 315


>ref|NP_612578.1| Inclusion body matrix protein [Carnation etched ring virus]
           gi|124051|sp|P05401.1|IBMP_CERV RecName:
           Full=Transactivator/viroplasmin protein; Short=Tav;
           AltName: Full=Inclusion body matrix protein
           gi|58864|emb|CAA28361.1| unnamed protein product
           [Carnation etched ring virus] gi|225357|prf||1301227F
           ORF 6
          Length = 496

 Score = 52.4 bits (124), Expect(2) = 3e-06
 Identities = 23/58 (39%), Positives = 39/58 (67%)
 Frame = -3

Query: 175 MLEKIYTTDKTNISYINAYPNAPADIIFDAFVYGLLKVIYPSENLQEIQHFPKLFRSA 2
           + ++ +T DK  ISY+N   N+  + I ++F  GL++ IYPS NLQE++  PK+ +S+
Sbjct: 257 LTDRAFTIDKKEISYLNFVNNSDPEGILESFKAGLVRFIYPSTNLQELRLLPKVLKSS 314



 Score = 23.5 bits (49), Expect(2) = 3e-06
 Identities = 15/48 (31%), Positives = 23/48 (47%), Gaps = 3/48 (6%)
 Frame = -2

Query: 302 STMKVLGKKT---VPDKEQLFWNEEFEDFDVSCQVMFEEFDYLYKYAR 168
           S MK LGK     + + + + +N EF+          + F Y+YKY R
Sbjct: 211 SNMKSLGKPKFIKIEEDDDVGFNPEFD---------LKSFLYIYKYGR 249


>emb|CAH68830.1| inclusion body matrix protein [Carnation etched ring virus]
          Length = 496

 Score = 52.0 bits (123), Expect(2) = 4e-06
 Identities = 24/58 (41%), Positives = 39/58 (67%)
 Frame = -3

Query: 175 MLEKIYTTDKTNISYINAYPNAPADIIFDAFVYGLLKVIYPSENLQEIQHFPKLFRSA 2
           + ++ +T DK  ISY+N   N+  + I ++F  GL++ IYPS NLQE++  PK+ RS+
Sbjct: 257 LTDRAFTIDKKEISYLNFVNNSDPEGILESFKAGLVRFIYPSTNLQELRLLPKVPRSS 314



 Score = 23.5 bits (49), Expect(2) = 4e-06
 Identities = 15/48 (31%), Positives = 23/48 (47%), Gaps = 3/48 (6%)
 Frame = -2

Query: 302 STMKVLGKKT---VPDKEQLFWNEEFEDFDVSCQVMFEEFDYLYKYAR 168
           S MK LGK     + + + + +N EF+          + F Y+YKY R
Sbjct: 211 SNMKSLGKPKFIKIEEDDDVGFNPEFD---------LKSFLYIYKYGR 249