BLASTX nr result

ID: Bupleurum21_contig00028257 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00028257
         (440 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002272910.2| PREDICTED: rop guanine nucleotide exchange f...   253   9e-66
emb|CBI30469.3| unnamed protein product [Vitis vinifera]              253   9e-66
ref|XP_002534083.1| Rop guanine nucleotide exchange factor, puta...   247   6e-64
ref|XP_004157057.1| PREDICTED: rop guanine nucleotide exchange f...   240   8e-62
ref|XP_004147914.1| PREDICTED: rop guanine nucleotide exchange f...   240   8e-62

>ref|XP_002272910.2| PREDICTED: rop guanine nucleotide exchange factor 1-like [Vitis
           vinifera]
          Length = 701

 Score =  253 bits (647), Expect = 9e-66
 Identities = 120/144 (83%), Positives = 129/144 (89%)
 Frame = +3

Query: 9   HNASDNVSQELERPKLDNKKLEKQGSTFSEIEMMKERFSKLLLGEDMSGCGNGVCTALAI 188
           H+ S       E+P  D  KLEKQGST S+IEMMKERFSKLLLGEDMSGCGNGVCTALAI
Sbjct: 173 HSLSSGDPDGAEKPHSDEMKLEKQGSTISDIEMMKERFSKLLLGEDMSGCGNGVCTALAI 232

Query: 189 SNAITNLCATLFGQIWRLEPLPPEKRSMWKREMEWLLCVSDHIVEMIPSWQTFADGSKLE 368
           SNAITNLCATLFGQ+WRLEPLP EK++MW+REMEWLLCVSDHIVE+IPSWQTF DGSKLE
Sbjct: 233 SNAITNLCATLFGQLWRLEPLPAEKKAMWRREMEWLLCVSDHIVELIPSWQTFPDGSKLE 292

Query: 369 VMTCRPRSDLYVNLPALRKLDNML 440
           VMTCRPRSDLY+NLPALRKLDNML
Sbjct: 293 VMTCRPRSDLYINLPALRKLDNML 316


>emb|CBI30469.3| unnamed protein product [Vitis vinifera]
          Length = 1231

 Score =  253 bits (647), Expect = 9e-66
 Identities = 120/144 (83%), Positives = 129/144 (89%)
 Frame = +3

Query: 9    HNASDNVSQELERPKLDNKKLEKQGSTFSEIEMMKERFSKLLLGEDMSGCGNGVCTALAI 188
            H+ S       E+P  D  KLEKQGST S+IEMMKERFSKLLLGEDMSGCGNGVCTALAI
Sbjct: 703  HSLSSGDPDGAEKPHSDEMKLEKQGSTISDIEMMKERFSKLLLGEDMSGCGNGVCTALAI 762

Query: 189  SNAITNLCATLFGQIWRLEPLPPEKRSMWKREMEWLLCVSDHIVEMIPSWQTFADGSKLE 368
            SNAITNLCATLFGQ+WRLEPLP EK++MW+REMEWLLCVSDHIVE+IPSWQTF DGSKLE
Sbjct: 763  SNAITNLCATLFGQLWRLEPLPAEKKAMWRREMEWLLCVSDHIVELIPSWQTFPDGSKLE 822

Query: 369  VMTCRPRSDLYVNLPALRKLDNML 440
            VMTCRPRSDLY+NLPALRKLDNML
Sbjct: 823  VMTCRPRSDLYINLPALRKLDNML 846



 Score =  192 bits (488), Expect = 2e-47
 Identities = 94/133 (70%), Positives = 107/133 (80%)
 Frame = +3

Query: 42  ERPKLDNKKLEKQGSTFSEIEMMKERFSKLLLGEDMSGCGNGVCTALAISNAITNLCATL 221
           E+P L   K EK  S  SE+EMMK RFS+LLLGEDMSG G GVCTALAIS  ITNL ATL
Sbjct: 158 EKPHLHEMKFEKHCSEISEVEMMKARFSRLLLGEDMSGRGIGVCTALAISKGITNLYATL 217

Query: 222 FGQIWRLEPLPPEKRSMWKREMEWLLCVSDHIVEMIPSWQTFADGSKLEVMTCRPRSDLY 401
           FG+IW+LEPL P K++MW+R+ EWLL VSDHIVE  P+WQ F DGS+ EVMTCR R+DLY
Sbjct: 218 FGKIWKLEPLDPMKKAMWRRDKEWLLSVSDHIVEFTPAWQKFPDGSEGEVMTCRLRADLY 277

Query: 402 VNLPALRKLDNML 440
            NLPALRKLD+ML
Sbjct: 278 ANLPALRKLDDML 290


>ref|XP_002534083.1| Rop guanine nucleotide exchange factor, putative [Ricinus communis]
           gi|223525876|gb|EEF28299.1| Rop guanine nucleotide
           exchange factor, putative [Ricinus communis]
          Length = 673

 Score =  247 bits (631), Expect = 6e-64
 Identities = 117/142 (82%), Positives = 131/142 (92%)
 Frame = +3

Query: 15  ASDNVSQELERPKLDNKKLEKQGSTFSEIEMMKERFSKLLLGEDMSGCGNGVCTALAISN 194
           +++ V  + ++  L ++KLEKQ S+ SEIEMMKERFSKLLLGEDMSGCGNGVCTALAISN
Sbjct: 186 STNGVCDDGKKLHLVDRKLEKQASSISEIEMMKERFSKLLLGEDMSGCGNGVCTALAISN 245

Query: 195 AITNLCATLFGQIWRLEPLPPEKRSMWKREMEWLLCVSDHIVEMIPSWQTFADGSKLEVM 374
           AITNLCATLFGQ+WRLEPLPPEK++MW+REMEW LCVSDHIVE+IPSWQTF DGSKLEVM
Sbjct: 246 AITNLCATLFGQLWRLEPLPPEKKAMWRREMEWFLCVSDHIVELIPSWQTFPDGSKLEVM 305

Query: 375 TCRPRSDLYVNLPALRKLDNML 440
           TCRPRSDLYVNLPALRKLDNML
Sbjct: 306 TCRPRSDLYVNLPALRKLDNML 327


>ref|XP_004157057.1| PREDICTED: rop guanine nucleotide exchange factor 1-like [Cucumis
           sativus]
          Length = 598

 Score =  240 bits (613), Expect = 8e-62
 Identities = 113/133 (84%), Positives = 125/133 (93%)
 Frame = +3

Query: 42  ERPKLDNKKLEKQGSTFSEIEMMKERFSKLLLGEDMSGCGNGVCTALAISNAITNLCATL 221
           ++  +DN+KLEK+ S+ SEIEMMKERFSKLLLGEDMSGCGNGVCTALAISNAITNLCATL
Sbjct: 86  DKNHVDNRKLEKKVSSSSEIEMMKERFSKLLLGEDMSGCGNGVCTALAISNAITNLCATL 145

Query: 222 FGQIWRLEPLPPEKRSMWKREMEWLLCVSDHIVEMIPSWQTFADGSKLEVMTCRPRSDLY 401
           FGQ+WRLEPLP EK+ MW+REM+WLLCVSDHIVE+ P+WQTF DGSKLEVMTCRPRSDLY
Sbjct: 146 FGQLWRLEPLPSEKKLMWRREMDWLLCVSDHIVELTPTWQTFPDGSKLEVMTCRPRSDLY 205

Query: 402 VNLPALRKLDNML 440
           VNLPALRKLDNML
Sbjct: 206 VNLPALRKLDNML 218


>ref|XP_004147914.1| PREDICTED: rop guanine nucleotide exchange factor 1-like [Cucumis
           sativus]
          Length = 598

 Score =  240 bits (613), Expect = 8e-62
 Identities = 113/133 (84%), Positives = 125/133 (93%)
 Frame = +3

Query: 42  ERPKLDNKKLEKQGSTFSEIEMMKERFSKLLLGEDMSGCGNGVCTALAISNAITNLCATL 221
           ++  +DN+KLEK+ S+ SEIEMMKERFSKLLLGEDMSGCGNGVCTALAISNAITNLCATL
Sbjct: 86  DKNHVDNRKLEKKVSSSSEIEMMKERFSKLLLGEDMSGCGNGVCTALAISNAITNLCATL 145

Query: 222 FGQIWRLEPLPPEKRSMWKREMEWLLCVSDHIVEMIPSWQTFADGSKLEVMTCRPRSDLY 401
           FGQ+WRLEPLP EK+ MW+REM+WLLCVSDHIVE+ P+WQTF DGSKLEVMTCRPRSDLY
Sbjct: 146 FGQLWRLEPLPSEKKLMWRREMDWLLCVSDHIVELTPTWQTFPDGSKLEVMTCRPRSDLY 205

Query: 402 VNLPALRKLDNML 440
           VNLPALRKLDNML
Sbjct: 206 VNLPALRKLDNML 218


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