BLASTX nr result

ID: Bupleurum21_contig00028250 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00028250
         (259 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003526572.1| PREDICTED: F-box protein At1g78280-like [Gly...    93   3e-17
ref|XP_004168911.1| PREDICTED: F-box protein At1g78280-like [Cuc...    91   1e-16
ref|XP_004152754.1| PREDICTED: F-box protein At1g78280-like [Cuc...    91   1e-16
ref|XP_002513952.1| protein with unknown function [Ricinus commu...    89   3e-16
ref|NP_177951.6| transferase [Arabidopsis thaliana] gi|322510131...    89   4e-16

>ref|XP_003526572.1| PREDICTED: F-box protein At1g78280-like [Glycine max]
          Length = 970

 Score = 92.8 bits (229), Expect = 3e-17
 Identities = 45/74 (60%), Positives = 57/74 (77%)
 Frame = -1

Query: 223  ELNCWRPSHILDFGNMSIGDPICDLIPLYLDVFRGDSRLLQKFLESYKLPLMSDAAQTES 44
            E+  W PS+ILDF ++SIGDP+ DLIP+YLDVFRGDS LL+KFLESYKLP  S+ ++ ES
Sbjct: 851  EVKSWCPSNILDFSDLSIGDPLVDLIPIYLDVFRGDSYLLKKFLESYKLPFASNISRYES 910

Query: 43   IKEASKLFRPSYLA 2
             +   K  R SY+A
Sbjct: 911  TEGDQKFGRLSYVA 924


>ref|XP_004168911.1| PREDICTED: F-box protein At1g78280-like [Cucumis sativus]
          Length = 765

 Score = 90.5 bits (223), Expect = 1e-16
 Identities = 44/76 (57%), Positives = 56/76 (73%)
 Frame = -1

Query: 235 SDIRELNCWRPSHILDFGNMSIGDPICDLIPLYLDVFRGDSRLLQKFLESYKLPLMSDAA 56
           +D  +   W PS+ILDF N+SI DPICDLIP+YLDVFRG+  LLQ+FLESYKLPL    A
Sbjct: 646 NDNEQSESWCPSYILDFSNLSIDDPICDLIPIYLDVFRGNPNLLQRFLESYKLPL----A 701

Query: 55  QTESIKEASKLFRPSY 8
           +++++    KL R SY
Sbjct: 702 RSQNVDSGDKLRRHSY 717


>ref|XP_004152754.1| PREDICTED: F-box protein At1g78280-like [Cucumis sativus]
          Length = 961

 Score = 90.5 bits (223), Expect = 1e-16
 Identities = 44/76 (57%), Positives = 56/76 (73%)
 Frame = -1

Query: 235  SDIRELNCWRPSHILDFGNMSIGDPICDLIPLYLDVFRGDSRLLQKFLESYKLPLMSDAA 56
            +D  +   W PS+ILDF N+SI DPICDLIP+YLDVFRG+  LLQ+FLESYKLPL    A
Sbjct: 842  NDNEQSESWCPSYILDFSNLSIDDPICDLIPIYLDVFRGNPNLLQRFLESYKLPL----A 897

Query: 55   QTESIKEASKLFRPSY 8
            +++++    KL R SY
Sbjct: 898  RSQNVDSGDKLRRHSY 913


>ref|XP_002513952.1| protein with unknown function [Ricinus communis]
            gi|223547038|gb|EEF48535.1| protein with unknown function
            [Ricinus communis]
          Length = 978

 Score = 89.4 bits (220), Expect = 3e-16
 Identities = 44/75 (58%), Positives = 56/75 (74%)
 Frame = -1

Query: 226  RELNCWRPSHILDFGNMSIGDPICDLIPLYLDVFRGDSRLLQKFLESYKLPLMSDAAQTE 47
            R+   WRP HI+DF N+SIGD I DLIP+YLDVFRGD+ LL++FLESYKLPL++   + E
Sbjct: 860  RDDKSWRPGHIIDFSNLSIGDRIYDLIPVYLDVFRGDTSLLKQFLESYKLPLLT--GKHE 917

Query: 46   SIKEASKLFRPSYLA 2
            ++K   K  R SY A
Sbjct: 918  AVKGTDKFARLSYRA 932


>ref|NP_177951.6| transferase [Arabidopsis thaliana]
            gi|322510131|sp|Q9M9E8.3|FB92_ARATH RecName: Full=F-box
            protein At1g78280 gi|332197969|gb|AEE36090.1| transferase
            [Arabidopsis thaliana]
          Length = 943

 Score = 89.0 bits (219), Expect = 4e-16
 Identities = 44/75 (58%), Positives = 57/75 (76%), Gaps = 5/75 (6%)
 Frame = -1

Query: 217  NCWRPSHILDFGNMSIGDPICDLIPLYLDVFRGDSRLLQKFLESYKLPLM-SDAAQTESI 41
            N WRPSHILDF +++IGDPICDLIP+YLDVFRGD+ LL+K LE+Y LPL+ S +++  + 
Sbjct: 825  NSWRPSHILDFSDLTIGDPICDLIPIYLDVFRGDADLLKKLLENYGLPLIRSRSSENGTT 884

Query: 40   KEA----SKLFRPSY 8
            K A     K+  PSY
Sbjct: 885  KTADSTRKKVLSPSY 899


Top