BLASTX nr result

ID: Bupleurum21_contig00028247 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00028247
         (957 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAE71218.1| putative DEAD-box protein abstrakt [Trifolium pr...   142   2e-31
gb|AFK34615.1| unknown [Medicago truncatula]                          142   2e-31
ref|XP_003591973.1| DEAD-box ATP-dependent RNA helicase [Medicag...   142   2e-31
ref|XP_003553900.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   141   3e-31
ref|XP_003521701.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   141   3e-31

>dbj|BAE71218.1| putative DEAD-box protein abstrakt [Trifolium pratense]
          Length = 588

 Score =  142 bits (357), Expect = 2e-31
 Identities = 82/172 (47%), Positives = 107/172 (62%), Gaps = 4/172 (2%)
 Frame = -1

Query: 861 ISDLGRRGGEGMN--QDIILVRQDEKFTRLLTALEKTAPPALVFSNHKAVVDDLHIYLLV 688
           I ++GR G   ++  Q++  V+Q+ K   LL  L+KT PP L+F  +KA VDD+H YLL+
Sbjct: 357 IVNVGRAGAANLDVIQEVEYVKQEAKIVYLLECLQKTPPPVLIFCENKADVDDIHEYLLL 416

Query: 687 KGVEVTALHGDLQQCEREEAMSLFISGKKDVLVASDLASIGLDFNEVQHVINFDVPANIE 508
           KGVE  A+HG   Q ERE A+S F +GKKDVLVA+D+AS GLDF ++QHVIN+D+PA IE
Sbjct: 417 KGVEAVAIHGGKDQEEREYAISSFKAGKKDVLVATDVASKGLDFPDIQHVINYDMPAEIE 476

Query: 507 IYSRRLGCARRC--RXXXXXXXXXXXXXXXLYDLRDLLIKDNQTIPSFLAEL 358
            Y  R+G   RC                  L DL+ LL +  Q IP  LAEL
Sbjct: 477 NYVHRIGRTGRCGKTGIATTFINKNQSETTLLDLKHLLQEAKQRIPPVLAEL 528


>gb|AFK34615.1| unknown [Medicago truncatula]
          Length = 589

 Score =  142 bits (357), Expect = 2e-31
 Identities = 82/172 (47%), Positives = 107/172 (62%), Gaps = 4/172 (2%)
 Frame = -1

Query: 861 ISDLGRRGGEGMN--QDIILVRQDEKFTRLLTALEKTAPPALVFSNHKAVVDDLHIYLLV 688
           I ++GR G   ++  Q++  V+Q+ K   LL  L+KT PP L+F  +KA VDD+H YLL+
Sbjct: 358 IVNVGRAGAANLDVIQEVEYVKQEAKIVYLLECLQKTPPPVLIFCENKADVDDIHEYLLL 417

Query: 687 KGVEVTALHGDLQQCEREEAMSLFISGKKDVLVASDLASIGLDFNEVQHVINFDVPANIE 508
           KGVE  A+HG   Q ERE A+S F +GKKDVLVA+D+AS GLDF ++QHVIN+D+PA IE
Sbjct: 418 KGVEAVAIHGGKDQEEREYAISSFKAGKKDVLVATDVASKGLDFPDIQHVINYDMPAEIE 477

Query: 507 IYSRRLGCARRC--RXXXXXXXXXXXXXXXLYDLRDLLIKDNQTIPSFLAEL 358
            Y  R+G   RC                  L DL+ LL +  Q IP  LAEL
Sbjct: 478 NYVHRIGRTGRCGKTGIATTFINKNQSETTLLDLKHLLQEAKQRIPPVLAEL 529


>ref|XP_003591973.1| DEAD-box ATP-dependent RNA helicase [Medicago truncatula]
           gi|355481021|gb|AES62224.1| DEAD-box ATP-dependent RNA
           helicase [Medicago truncatula]
          Length = 589

 Score =  142 bits (357), Expect = 2e-31
 Identities = 82/172 (47%), Positives = 107/172 (62%), Gaps = 4/172 (2%)
 Frame = -1

Query: 861 ISDLGRRGGEGMN--QDIILVRQDEKFTRLLTALEKTAPPALVFSNHKAVVDDLHIYLLV 688
           I ++GR G   ++  Q++  V+Q+ K   LL  L+KT PP L+F  +KA VDD+H YLL+
Sbjct: 358 IVNVGRAGAANLDVIQEVEYVKQEAKIVYLLECLQKTPPPVLIFCENKADVDDIHEYLLL 417

Query: 687 KGVEVTALHGDLQQCEREEAMSLFISGKKDVLVASDLASIGLDFNEVQHVINFDVPANIE 508
           KGVE  A+HG   Q ERE A+S F +GKKDVLVA+D+AS GLDF ++QHVIN+D+PA IE
Sbjct: 418 KGVEAVAIHGGKDQEEREYAISSFKAGKKDVLVATDVASKGLDFPDIQHVINYDMPAEIE 477

Query: 507 IYSRRLGCARRC--RXXXXXXXXXXXXXXXLYDLRDLLIKDNQTIPSFLAEL 358
            Y  R+G   RC                  L DL+ LL +  Q IP  LAEL
Sbjct: 478 NYVHRIGRTGRCGKTGIATTFINKNQSETTLLDLKHLLQEAKQRIPPVLAEL 529


>ref|XP_003553900.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 35-like isoform 1
           [Glycine max] gi|356571473|ref|XP_003553901.1|
           PREDICTED: DEAD-box ATP-dependent RNA helicase 35-like
           isoform 2 [Glycine max]
          Length = 588

 Score =  141 bits (355), Expect = 3e-31
 Identities = 81/172 (47%), Positives = 107/172 (62%), Gaps = 4/172 (2%)
 Frame = -1

Query: 861 ISDLGRRGGEGMN--QDIILVRQDEKFTRLLTALEKTAPPALVFSNHKAVVDDLHIYLLV 688
           I ++GR G   ++  Q++  V+Q+ K   LL  L+KT PP L+F  +KA VDD+H YLL+
Sbjct: 357 IVNVGRAGAANLDVIQEVEYVKQEAKIVYLLECLQKTPPPVLIFCENKADVDDIHEYLLL 416

Query: 687 KGVEVTALHGDLQQCEREEAMSLFISGKKDVLVASDLASIGLDFNEVQHVINFDVPANIE 508
           KGVE  A+HG   Q ERE A++ F +GKKDVLVA+D+AS GLDF ++QHVIN+D+PA IE
Sbjct: 417 KGVEAVAIHGGKDQEEREYAIAAFKAGKKDVLVATDVASKGLDFPDIQHVINYDMPAEIE 476

Query: 507 IYSRRLGCARRC--RXXXXXXXXXXXXXXXLYDLRDLLIKDNQTIPSFLAEL 358
            Y  R+G   RC                  L DL+ LL +  Q IP  LAEL
Sbjct: 477 NYVHRIGRTGRCGKTGIATTFINKNQSETTLLDLKHLLQEAKQRIPPVLAEL 528


>ref|XP_003521701.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 35-like [Glycine
           max]
          Length = 587

 Score =  141 bits (355), Expect = 3e-31
 Identities = 81/172 (47%), Positives = 107/172 (62%), Gaps = 4/172 (2%)
 Frame = -1

Query: 861 ISDLGRRGGEGMN--QDIILVRQDEKFTRLLTALEKTAPPALVFSNHKAVVDDLHIYLLV 688
           I ++GR G   ++  Q++  V+Q+ K   LL  L+KT PP L+F  +KA VDD+H YLL+
Sbjct: 356 IVNVGRAGAANLDVIQEVEYVKQEAKIVYLLECLQKTPPPVLIFCENKADVDDIHEYLLL 415

Query: 687 KGVEVTALHGDLQQCEREEAMSLFISGKKDVLVASDLASIGLDFNEVQHVINFDVPANIE 508
           KGVE  A+HG   Q ERE A++ F +GKKDVLVA+D+AS GLDF ++QHVIN+D+PA IE
Sbjct: 416 KGVEAVAIHGGKDQEEREYAIAAFKAGKKDVLVATDVASKGLDFPDIQHVINYDMPAEIE 475

Query: 507 IYSRRLGCARRC--RXXXXXXXXXXXXXXXLYDLRDLLIKDNQTIPSFLAEL 358
            Y  R+G   RC                  L DL+ LL +  Q IP  LAEL
Sbjct: 476 NYVHRIGRTGRCGKTGIATTFINKNQSETTLLDLKHLLQEAKQRIPPVLAEL 527


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