BLASTX nr result

ID: Bupleurum21_contig00028246 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00028246
         (692 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAE71218.1| putative DEAD-box protein abstrakt [Trifolium pr...   127   2e-27
gb|AFK34615.1| unknown [Medicago truncatula]                          127   2e-27
ref|XP_002512074.1| dead box ATP-dependent RNA helicase, putativ...   127   2e-27
ref|XP_002528806.1| dead box ATP-dependent RNA helicase, putativ...   127   2e-27
ref|XP_002333939.1| predicted protein [Populus trichocarpa] gi|2...   127   2e-27

>dbj|BAE71218.1| putative DEAD-box protein abstrakt [Trifolium pratense]
          Length = 588

 Score =  127 bits (320), Expect = 2e-27
 Identities = 72/164 (43%), Positives = 98/164 (59%), Gaps = 6/164 (3%)
 Frame = +3

Query: 90  AMNHDII----LVRQEERFTRLLTALEKTAPPTLVFSNYKSVVDDLHVYLLEKSVDVTAL 257
           A N D+I     V+QE +   LL  L+KT PP L+F   K+ VDD+H YLL K V+  A+
Sbjct: 365 AANLDVIQEVEYVKQEAKIVYLLECLQKTPPPVLIFCENKADVDDIHEYLLLKGVEAVAI 424

Query: 258 HGGLHQGEREEAMSQFLSGKTDVLVASDLASIGLDFTEVQHVINFEVPAKIDIYLRRLGS 437
           HGG  Q ERE A+S F +GK DVLVA+D+AS GLDF ++QHVIN+++PA+I+ Y+ R+G 
Sbjct: 425 HGGKDQEEREYAISSFKAGKKDVLVATDVASKGLDFPDIQHVINYDMPAEIENYVHRIGR 484

Query: 438 ARSC--RXXXXXXXXXXXXXXXXYELRELLIKDNQIVPSFLAEL 563
              C                    +L+ LL +  Q +P  LAEL
Sbjct: 485 TGRCGKTGIATTFINKNQSETTLLDLKHLLQEAKQRIPPVLAEL 528


>gb|AFK34615.1| unknown [Medicago truncatula]
          Length = 589

 Score =  127 bits (320), Expect = 2e-27
 Identities = 72/164 (43%), Positives = 98/164 (59%), Gaps = 6/164 (3%)
 Frame = +3

Query: 90  AMNHDII----LVRQEERFTRLLTALEKTAPPTLVFSNYKSVVDDLHVYLLEKSVDVTAL 257
           A N D+I     V+QE +   LL  L+KT PP L+F   K+ VDD+H YLL K V+  A+
Sbjct: 366 AANLDVIQEVEYVKQEAKIVYLLECLQKTPPPVLIFCENKADVDDIHEYLLLKGVEAVAI 425

Query: 258 HGGLHQGEREEAMSQFLSGKTDVLVASDLASIGLDFTEVQHVINFEVPAKIDIYLRRLGS 437
           HGG  Q ERE A+S F +GK DVLVA+D+AS GLDF ++QHVIN+++PA+I+ Y+ R+G 
Sbjct: 426 HGGKDQEEREYAISSFKAGKKDVLVATDVASKGLDFPDIQHVINYDMPAEIENYVHRIGR 485

Query: 438 ARSC--RXXXXXXXXXXXXXXXXYELRELLIKDNQIVPSFLAEL 563
              C                    +L+ LL +  Q +P  LAEL
Sbjct: 486 TGRCGKTGIATTFINKNQSETTLLDLKHLLQEAKQRIPPVLAEL 529


>ref|XP_002512074.1| dead box ATP-dependent RNA helicase, putative [Ricinus communis]
           gi|223549254|gb|EEF50743.1| dead box ATP-dependent RNA
           helicase, putative [Ricinus communis]
          Length = 578

 Score =  127 bits (320), Expect = 2e-27
 Identities = 70/196 (35%), Positives = 110/196 (56%), Gaps = 21/196 (10%)
 Frame = +3

Query: 114 VRQEERFTRLLTALEKTAPPTLVFSNYKSVVDDLHVYLLEKSVDVTALHGGLHQGEREEA 293
           V+QE + + +L  L+KT PP ++F   K+ VDD+H+ LL + VD  A+HGG+ Q ERE A
Sbjct: 371 VKQERKKSYILHCLKKTQPPVIIFCKDKADVDDIHLNLLSEGVDAVAIHGGMDQEEREHA 430

Query: 294 MSQFLSGKTDVLVASDLASIGLDFTEVQHVINFEVPAKIDIYLRRLGSARSC--RXXXXX 467
           +S F +GK DVL+A+D+AS GLDF ++QHVIN+++PA+++ Y+ R+G    C  +     
Sbjct: 431 VSSFKAGKKDVLIATDVASKGLDFADIQHVINYDMPAEVENYVHRIGRTGRCSKKGRATT 490

Query: 468 XXXXXXXXXXXYELRELLIKDNQIVPSFLAELPAGK-------------------RPSKM 590
                       +L+ LL++  Q +PS L  L  G+                   R S  
Sbjct: 491 FINKSQSERTLLDLKHLLLEAKQNLPSILVNLREGETIGNAPEHRGCSYCGGLGHRISNC 550

Query: 591 KKIENLCHTQLASYRK 638
            K+E+    Q ++YR+
Sbjct: 551 SKLESQRSQQFSNYRR 566


>ref|XP_002528806.1| dead box ATP-dependent RNA helicase, putative [Ricinus communis]
           gi|223531759|gb|EEF33579.1| dead box ATP-dependent RNA
           helicase, putative [Ricinus communis]
          Length = 500

 Score =  127 bits (320), Expect = 2e-27
 Identities = 72/164 (43%), Positives = 98/164 (59%), Gaps = 6/164 (3%)
 Frame = +3

Query: 90  AMNHDII----LVRQEERFTRLLTALEKTAPPTLVFSNYKSVVDDLHVYLLEKSVDVTAL 257
           A N D+I     V+QE +   LL  L+KT PP L+F   K+ VDD+H YLL K V+  A+
Sbjct: 277 AANLDVIQEVEYVKQEAKIVYLLECLQKTPPPVLIFCENKADVDDIHEYLLLKGVEAVAI 336

Query: 258 HGGLHQGEREEAMSQFLSGKTDVLVASDLASIGLDFTEVQHVINFEVPAKIDIYLRRLGS 437
           HGG  Q ERE A+S F +GK DVLVA+D+AS GLDF ++QHVIN+++PA+I+ Y+ R+G 
Sbjct: 337 HGGKDQEEREYAISSFKAGKKDVLVATDVASKGLDFPDIQHVINYDMPAEIENYVHRIGR 396

Query: 438 ARSC--RXXXXXXXXXXXXXXXXYELRELLIKDNQIVPSFLAEL 563
              C                    +L+ LL +  Q +P  LAEL
Sbjct: 397 TGRCGKTGIATTFINKNQSETTLLDLKHLLQEAKQRIPPVLAEL 440


>ref|XP_002333939.1| predicted protein [Populus trichocarpa] gi|222839273|gb|EEE77610.1|
           predicted protein [Populus trichocarpa]
          Length = 238

 Score =  127 bits (320), Expect = 2e-27
 Identities = 73/164 (44%), Positives = 98/164 (59%), Gaps = 6/164 (3%)
 Frame = +3

Query: 90  AMNHDII----LVRQEERFTRLLTALEKTAPPTLVFSNYKSVVDDLHVYLLEKSVDVTAL 257
           A N D+I     V+QE +   LL  L+KT PP LVF   K+ VDD+H YLL K V+  A+
Sbjct: 15  AANLDVIQEVEYVKQEAKIVYLLECLQKTPPPVLVFCENKADVDDIHEYLLLKGVEAVAV 74

Query: 258 HGGLHQGEREEAMSQFLSGKTDVLVASDLASIGLDFTEVQHVINFEVPAKIDIYLRRLGS 437
           HGG  Q ERE A+S F +GK DVLVA+D+AS GLDF ++QHVIN+++PA+I+ Y+ R+G 
Sbjct: 75  HGGKDQEEREYAISSFKAGKKDVLVATDVASKGLDFPDIQHVINYDMPAEIENYVHRIGR 134

Query: 438 ARSC--RXXXXXXXXXXXXXXXXYELRELLIKDNQIVPSFLAEL 563
              C                    +L+ LL +  Q +P  LAEL
Sbjct: 135 TGRCGKTGIATTFINKNQSETTLLDLKHLLQEAKQRIPPVLAEL 178


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