BLASTX nr result

ID: Bupleurum21_contig00028245 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00028245
         (320 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278063.1| PREDICTED: transcription factor MYB39 [Vitis...    94   9e-18
ref|XP_002318064.1| predicted protein [Populus trichocarpa] gi|2...    86   3e-15
ref|XP_002321627.1| predicted protein [Populus trichocarpa] gi|2...    81   1e-13
gb|AFK48097.1| unknown [Medicago truncatula]                           77   2e-12
emb|CBI14969.3| unnamed protein product [Vitis vinifera]               75   7e-12

>ref|XP_002278063.1| PREDICTED: transcription factor MYB39 [Vitis vinifera]
          Length = 367

 Score = 94.4 bits (233), Expect = 9e-18
 Identities = 55/109 (50%), Positives = 66/109 (60%), Gaps = 3/109 (2%)
 Frame = -1

Query: 320 TDNEIKNFWNSCLKKKLMKQGIDPNTHKPLTESEITTSTEKNYTNGTSL--LQSSQAHRI 147
           TDNEIKNFWNSCLKKKL+KQG+DPNTHKPL E+E+     KN T   SL  LQ      +
Sbjct: 100 TDNEIKNFWNSCLKKKLLKQGMDPNTHKPLNETEV--GDGKNCTEKASLQVLQPKGLPAV 157

Query: 146 EPASAEAEKPYNV-NETCYDRSGNVRLGEVSGDPLHNNSNFDPLFLLEF 3
             ++AE E+P+ V N +CYD      L E S     N   FDP+   EF
Sbjct: 158 PSSAAEFEQPFMVNNSSCYDGG----LTEGSRVQFMNKPGFDPMSFFEF 202


>ref|XP_002318064.1| predicted protein [Populus trichocarpa] gi|222858737|gb|EEE96284.1|
           predicted protein [Populus trichocarpa]
          Length = 370

 Score = 85.9 bits (211), Expect = 3e-15
 Identities = 50/107 (46%), Positives = 63/107 (58%), Gaps = 1/107 (0%)
 Frame = -1

Query: 320 TDNEIKNFWNSCLKKKLMKQGIDPNTHKPLTESEITTSTEKNYTNGTSL-LQSSQAHRIE 144
           TDNEIKNFWNSCLKKKLMKQGIDP THKPL++ E+    EK  T   S  +  S+   I 
Sbjct: 100 TDNEIKNFWNSCLKKKLMKQGIDPATHKPLSQVEV--KEEKICTEKASFQIPQSKGLPIL 157

Query: 143 PASAEAEKPYNVNETCYDRSGNVRLGEVSGDPLHNNSNFDPLFLLEF 3
              +  E  + +N+T Y+ SG   L E S +   N   +DP+   EF
Sbjct: 158 SNFSAPEPAFIINDTAYNSSG---LTEASREQFINKQAYDPIAYFEF 201


>ref|XP_002321627.1| predicted protein [Populus trichocarpa] gi|222868623|gb|EEF05754.1|
           predicted protein [Populus trichocarpa]
          Length = 371

 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 49/107 (45%), Positives = 60/107 (56%), Gaps = 1/107 (0%)
 Frame = -1

Query: 320 TDNEIKNFWNSCLKKKLMKQGIDPNTHKPLTESEITTSTEKNYTNGTSL-LQSSQAHRIE 144
           TDNEIKN WNS LKKKLMKQGIDP THKPL   ++    EK+ T   S  +  S+   I 
Sbjct: 100 TDNEIKNLWNSYLKKKLMKQGIDPTTHKPL--CQVGVKEEKDCTEKASFQIPQSKGLPIV 157

Query: 143 PASAEAEKPYNVNETCYDRSGNVRLGEVSGDPLHNNSNFDPLFLLEF 3
                 E  + +N+T Y+ SG   L EVS +   N   +DPL   EF
Sbjct: 158 SNFTAQEPAFLINDTTYNSSG---LPEVSREQFLNKQAYDPLSYFEF 201


>gb|AFK48097.1| unknown [Medicago truncatula]
          Length = 361

 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 44/106 (41%), Positives = 58/106 (54%)
 Frame = -1

Query: 320 TDNEIKNFWNSCLKKKLMKQGIDPNTHKPLTESEITTSTEKNYTNGTSLLQSSQAHRIEP 141
           TDNEIKNFWNSCLKKKL+KQGIDP THKPLTE+ +    +   T   S+       +I  
Sbjct: 100 TDNEIKNFWNSCLKKKLLKQGIDPTTHKPLTEAYLKEENKITETTVPSM-------QIPS 152

Query: 140 ASAEAEKPYNVNETCYDRSGNVRLGEVSGDPLHNNSNFDPLFLLEF 3
            ++        + + YD +G   L E S +   +    DPLF  +F
Sbjct: 153 ITSHGSAFLITDSSYYDDNG---LTEASREIFTSKQALDPLFCYDF 195


>emb|CBI14969.3| unnamed protein product [Vitis vinifera]
          Length = 175

 Score = 74.7 bits (182), Expect = 7e-12
 Identities = 36/56 (64%), Positives = 40/56 (71%)
 Frame = -1

Query: 320 TDNEIKNFWNSCLKKKLMKQGIDPNTHKPLTESEITTSTEKNYTNGTSLLQSSQAH 153
           TDNEIKNFWNSCLKKKL+KQG+DPNTHKPL E+E+     KN T   SL      H
Sbjct: 100 TDNEIKNFWNSCLKKKLLKQGMDPNTHKPLNETEV--GDGKNCTEKASLQLQHHFH 153


Top