BLASTX nr result

ID: Bupleurum21_contig00028238 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00028238
         (825 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002268004.1| PREDICTED: ethylene-responsive transcription...   190   4e-46
ref|XP_002323984.1| AP2/ERF domain-containing transcription fact...   188   1e-45
ref|XP_002518093.1| hypothetical protein RCOM_1019500 [Ricinus c...   177   3e-42
emb|CBI17312.3| unnamed protein product [Vitis vinifera]              177   3e-42
ref|XP_002298696.1| AP2/ERF domain-containing transcription fact...   174   2e-41

>ref|XP_002268004.1| PREDICTED: ethylene-responsive transcription factor ERF062 [Vitis
           vinifera] gi|147863479|emb|CAN84054.1| hypothetical
           protein VITISV_015748 [Vitis vinifera]
          Length = 442

 Score =  190 bits (482), Expect = 4e-46
 Identities = 138/334 (41%), Positives = 167/334 (50%), Gaps = 71/334 (21%)
 Frame = +1

Query: 34  MNEQFPKVETLLPNELMLPSYFQDLDQGSQNFTDPNAWN--------------------- 150
           M +QFPK++T L  EL  PSYFQ    GS+ F D   W+                     
Sbjct: 1   MEDQFPKMQTFLRKEL--PSYFQG-PVGSRFFGDATIWDGLAESASCNHVTGSNVKLSSS 57

Query: 151 ---ILHSKSESNSQMDDKSCVTTLSNIP------------------GLERTNLAEESSC- 264
               L S SES S +D+ S    + N+P                  G    NL+  SS  
Sbjct: 58  SPDSLFSSSESTSSVDEASASNLVKNMPEFTREDPLQTQHGVPFFSGSNSVNLSGASSTS 117

Query: 265 ------IPLNFLESFPFLESFHQLKQPSQNHVSKQSSVSTDLKSTNLNLFLNNPSIL--- 417
                 IP+NFLESFP L        PS       SS ST     NL LFL  PS +   
Sbjct: 118 DVNQRFIPVNFLESFPELTPAQVSGPPSP------SSSSTASNFPNLTLFLQEPSTVVID 171

Query: 418 ---DVSKPRFESDMFECTKNLPV-PTSQHSDQISSECPGIS----QNLLTSYRPEGLSDN 573
               ++     ++  E   + P+ PT Q S   S   PG         L ++  +GLSD 
Sbjct: 172 PSTQIANSLGRNEKCEPMSSCPLFPTPQLSQ--SQHLPGFEWLKINQSLANHPSKGLSDY 229

Query: 574 WLGARKSQPTKSSGRRI----QKSSYT-------KLFRGVRQRHWGKWVAKIRLPRNRTR 720
           WL   K+QP K +GRR+    QK+S +       KLFRGVRQRHWGKWVA+IRLPRNRTR
Sbjct: 230 WLSTTKTQPMKYTGRRMLNHQQKTSLSSSASSPGKLFRGVRQRHWGKWVAEIRLPRNRTR 289

Query: 721 VWLGTFDTAEEAAVVYDTAAYLLRGDYAHLNFPE 822
           VWLGTFDTA+EAA  YDTAAY+LRGDYAHLNFPE
Sbjct: 290 VWLGTFDTAQEAAFAYDTAAYILRGDYAHLNFPE 323


>ref|XP_002323984.1| AP2/ERF domain-containing transcription factor [Populus
           trichocarpa] gi|148372112|gb|ABQ62987.1| RAP2-like
           protein [Populus trichocarpa]
           gi|222866986|gb|EEF04117.1| AP2/ERF domain-containing
           transcription factor [Populus trichocarpa]
          Length = 456

 Score =  188 bits (477), Expect = 1e-45
 Identities = 136/342 (39%), Positives = 174/342 (50%), Gaps = 79/342 (23%)
 Frame = +1

Query: 34  MNEQFPKVETLLPNELMLP-SYFQDLDQGSQNFTDPNAWNILH----------------- 159
           M +QFPK+ET +  EL+     F  +  GS+ F DP  W  L                  
Sbjct: 1   MEDQFPKIETFMHKELVAAYCSFHGMATGSKYFGDPTIWGALSGATCRVEDGNSGMKSPS 60

Query: 160 --------SKSESNSQMDDKSCVTTL-SNIPGLERTNLAEES------------------ 258
                   S SES+S  DD+   T L  NIPG  + ++ ++                   
Sbjct: 61  QSSSERLFSSSESSSSADDQVSGTDLIGNIPGFGKQDVVKQDHESCFMSGLNSINALGAN 120

Query: 259 ---------SCIPLNFLESFPFLESFHQLKQPSQNHVSKQSSVSTDLKSTNLNLFLNNP- 408
                    S IP+NFLE FP L++  Q+ +P        SS+S   KS NL LF   P 
Sbjct: 121 SISDQTIKESSIPVNFLEPFPTLKNQAQVPEPPS-----PSSLS---KSPNLTLFSQEPA 172

Query: 409 --SILDVSK----PRFESDMFECTKNLPVPTSQHSDQI-------SSECPGISQNLLTSY 549
             S+L  SK    P  +    E   +L   TS    Q+       S+E   I+Q L  +Y
Sbjct: 173 AASLLHPSKRVLDPPGKDQRCEPAMSLFPNTSFSMPQLGQVHCQPSNEWLKINQTL-ANY 231

Query: 550 RPEGLSDNWLGARKSQPTKSSGRRIQ----KSSYT-------KLFRGVRQRHWGKWVAKI 696
             +G +D WL   K+QP K SGR++Q    K S++       KLFRGVRQRHWGKWVA+I
Sbjct: 232 STKGFNDYWLSTTKTQPMKYSGRKLQNHHQKPSFSSASTSPGKLFRGVRQRHWGKWVAEI 291

Query: 697 RLPRNRTRVWLGTFDTAEEAAVVYDTAAYLLRGDYAHLNFPE 822
           RLPRNRTRVWLGTFDTAE+AA+ YDTAAY+LRGDYAHLNFP+
Sbjct: 292 RLPRNRTRVWLGTFDTAEDAAIAYDTAAYMLRGDYAHLNFPD 333


>ref|XP_002518093.1| hypothetical protein RCOM_1019500 [Ricinus communis]
           gi|223542689|gb|EEF44226.1| hypothetical protein
           RCOM_1019500 [Ricinus communis]
          Length = 466

 Score =  177 bits (449), Expect = 3e-42
 Identities = 125/293 (42%), Positives = 149/293 (50%), Gaps = 62/293 (21%)
 Frame = +1

Query: 130 TDPNAWNILHSKSESNSQMDDKSCVTTL-SNIPGLERTNLAE------------------ 252
           T P++   L S S+S S  ++ S    L  NIPG    +++E                  
Sbjct: 50  TSPSSPERLFSSSDSCSSAEEASGTNNLIGNIPGFVEQDVSEQNHASSFLSGLNSINPSL 109

Query: 253 -----ESSCIPLNFLESFPFLE----SFHQLKQPSQNHVSKQSSVSTDLKSTNLNLFLNN 405
                ESS IP+NFLESFP L     S HQ   PS              K  NL LFL  
Sbjct: 110 LSEIKESSNIPVNFLESFPKLNQTQVSDHQPSSPS--------------KFPNLTLFLQE 155

Query: 406 PSIL--DVSKPRFES------DMFECTKNLPVPTSQHSDQISSECPGISQN-------LL 540
           PS+L    SK + +S       MFE     P  +S    Q+       SQ+        L
Sbjct: 156 PSLLLDPSSKQKIDSLSHENRTMFEPMLRFP-SSSVSVSQLEQIYGQTSQDQWLKINQTL 214

Query: 541 TSYRPEGLSDNWLGARKSQPTKSSGRRIQK-------------------SSYTKLFRGVR 663
           T Y  +G +D WLG  K+QP K +GRR+Q                    SS  KLFRGVR
Sbjct: 215 TYYPTKGFNDYWLGTTKTQPMKHTGRRVQNHQQKSPLPSMAAAVSSSSSSSQGKLFRGVR 274

Query: 664 QRHWGKWVAKIRLPRNRTRVWLGTFDTAEEAAVVYDTAAYLLRGDYAHLNFPE 822
           QRHWGKWVA+IRLPRNRTRVWLGTFDTAEEAA+ YDTAAY+LRGDYAHLNFP+
Sbjct: 275 QRHWGKWVAEIRLPRNRTRVWLGTFDTAEEAAMAYDTAAYMLRGDYAHLNFPD 327


>emb|CBI17312.3| unnamed protein product [Vitis vinifera]
          Length = 447

 Score =  177 bits (448), Expect = 3e-42
 Identities = 119/303 (39%), Positives = 157/303 (51%), Gaps = 36/303 (11%)
 Frame = +1

Query: 22  LKFSMNEQFPKVETLLPNELMLPSYFQDLDQGSQNFTDPNAWN----------------- 150
           ++ SM +QFPK++T L  EL  PSYFQ    GS+ F D   W+                 
Sbjct: 55  IRTSMEDQFPKMQTFLRKEL--PSYFQG-PVGSRFFGDATIWDGLAESASCNHVTGSNVK 111

Query: 151 -------ILHSKSESNSQMDDKSCVTTLSNIPGLERTNLAEESSCIPLNFLESFPFLESF 309
                   L S SES S +D+ S    + N+P   R +  +    +P     +   L   
Sbjct: 112 LSSSSPDSLFSSSESTSSVDEASASNLVKNMPEFTREDPLQTQHGVPFFSGSNSVNLSGA 171

Query: 310 HQLKQPSQNHVSKQSSVSTDLKSTNLNLFLNNPSILDVSK-PRFESDMFECTKNLPVPTS 486
                 +Q  + + S+V  D  +   N    N     +S  P F +     +++LP    
Sbjct: 172 SSTSDVNQRFIPEPSTVVIDPSTQIANSLGRNEKCEPMSSCPLFPTPQLSQSQHLP---- 227

Query: 487 QHSDQISSECPGISQNLLTSYRPEGLSDNWLGARKSQPTKSSGRRI----QKSSYT---- 642
                   E   I+Q+L  ++  +GLSD WL   K+QP K +GRR+    QK+S +    
Sbjct: 228 ------GFEWLKINQSL-ANHPSKGLSDYWLSTTKTQPMKYTGRRMLNHQQKTSLSSSAS 280

Query: 643 ---KLFRGVRQRHWGKWVAKIRLPRNRTRVWLGTFDTAEEAAVVYDTAAYLLRGDYAHLN 813
              KLFRGVRQRHWGKWVA+IRLPRNRTRVWLGTFDTA+EAA  YDTAAY+LRGDYAHLN
Sbjct: 281 SPGKLFRGVRQRHWGKWVAEIRLPRNRTRVWLGTFDTAQEAAFAYDTAAYILRGDYAHLN 340

Query: 814 FPE 822
           FPE
Sbjct: 341 FPE 343


>ref|XP_002298696.1| AP2/ERF domain-containing transcription factor [Populus trichocarpa]
            gi|148372114|gb|ABQ62988.1| RAP2.4-like protein [Populus
            trichocarpa] gi|222845954|gb|EEE83501.1| AP2/ERF
            domain-containing transcription factor [Populus
            trichocarpa]
          Length = 459

 Score =  174 bits (441), Expect = 2e-41
 Identities = 128/341 (37%), Positives = 160/341 (46%), Gaps = 85/341 (24%)
 Frame = +1

Query: 55   VETLLPNELMLPSYFQDLDQGSQNFTDPNAWNIL-------------------------H 159
            +ET +  EL   S F  +  GS+ F DP +W  L                          
Sbjct: 1    METFMHKELAAQSSFHGMATGSRYFGDPTSWGALAGATCHVDDGNNGTKSPSQSSPERLF 60

Query: 160  SKSESNSQMDDKSCVTTL-SNIPGLERTN---------------------------LAEE 255
            S SES+S  DD    T L  NIPG  R +                           + +E
Sbjct: 61   SSSESSSSADDLVSGTNLVGNIPGFGRQDYSKQNHESCFMSGLCSINSPGGSVSDYIVKE 120

Query: 256  SSCIPLNFLESFPFLESFHQLKQPSQNHVSKQSSVSTDLKSTNLNLFLNNPSIL------ 417
            SS  P+NF E FP L +  Q+ +P        SS+S   K  NL LFL  P         
Sbjct: 121  SSINPVNFSEYFPALNNQAQVSEPPS-----PSSLSNTSKFPNLTLFLQEPEAFIQTSFQ 175

Query: 418  ---DVSKPRFESDMF----ECTKNLPVPTSQHSD--------QISSECPGISQNLLTSYR 552
                 SKP+   D       C      P +  S         Q S++   I+Q L  +Y 
Sbjct: 176  TTWQGSKPKQAVDQLGKDQRCEPMSLFPNTSFSMPQLGQIHFQPSNDWLKINQTL-ANYS 234

Query: 553  PEGLSDNWLGARKSQPTKSSGRRIQ----KSSYT-------KLFRGVRQRHWGKWVAKIR 699
             +G +D WL    +QP K +GRR+Q    K S++       KLFRGVRQRHWGKWV +IR
Sbjct: 235  IKGFNDYWLRTTTTQPMKYTGRRLQNQHQKPSFSSASTSPGKLFRGVRQRHWGKWVTEIR 294

Query: 700  LPRNRTRVWLGTFDTAEEAAVVYDTAAYLLRGDYAHLNFPE 822
            LPRNRTRVWLGTF+TAEEAA+ YDTAAY+LRGDYAHLNFP+
Sbjct: 295  LPRNRTRVWLGTFNTAEEAAIAYDTAAYMLRGDYAHLNFPD 335


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