BLASTX nr result

ID: Bupleurum21_contig00028234 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00028234
         (1176 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003633419.1| PREDICTED: uncharacterized protein LOC100852...   397   e-108
ref|XP_002526428.1| conserved hypothetical protein [Ricinus comm...   395   e-108
ref|NP_172432.1| uncharacterized protein [Arabidopsis thaliana] ...   390   e-106
gb|AAC33218.1| Similar to cdc2 protein kinases [Arabidopsis thal...   390   e-106
emb|CAN78768.1| hypothetical protein VITISV_006251 [Vitis vinifera]   387   e-105

>ref|XP_003633419.1| PREDICTED: uncharacterized protein LOC100852653 [Vitis vinifera]
          Length = 352

 Score =  397 bits (1021), Expect = e-108
 Identities = 190/246 (77%), Positives = 212/246 (86%)
 Frame = -2

Query: 986 TLPKVLATLSNTNPTSCSPTCNKIPASISEALIHYTTSTITPQQTLKEISVTSRILDKKS 807
           +LPKV  T+      +CSPTC KIP S+++ALIHYTTSTITPQQTLKEISVTS+IL  KS
Sbjct: 45  SLPKVSNTIKEGKAANCSPTCTKIPTSLAQALIHYTTSTITPQQTLKEISVTSKILVNKS 104

Query: 806 PCNFLVFGLGHDSLMWTTLNFGGRTIFLEEDESWITQIKHRFPTLESYHVTYDSKVHQAD 627
           PCNFLVFGLGHDSLMW  LN GGRTIFLEEDE+WI QI+ RFP LESYHV YDSKV+QAD
Sbjct: 105 PCNFLVFGLGHDSLMWRELNHGGRTIFLEEDEAWIEQIRQRFPKLESYHVMYDSKVNQAD 164

Query: 626 GLMEVGKGNECTAIGETRYSMCQLALKGLPNVVYDTKWDLIMVDAPTGYHDEAPGRMSAI 447
            LMEVGKG EC  +G+ R+S CQLALKGLPN VYD KWDLIMVDAPTGY++EAPGRM+AI
Sbjct: 165 NLMEVGKGPECIGVGDIRHSTCQLALKGLPNEVYDIKWDLIMVDAPTGYYEEAPGRMAAI 224

Query: 446 YTAGMIARNREEGAETDIFVHDVNRVVEDKFSMAFLCEGYMIKQEGRLRHFRIPSHRNNL 267
           YTAGM+ARNR++G ETD+FVHDVNRVVEDKFS AFLC+GYM KQ GRLRHFRIPSHR+  
Sbjct: 225 YTAGMMARNRKDG-ETDVFVHDVNRVVEDKFSRAFLCDGYMRKQTGRLRHFRIPSHRDGS 283

Query: 266 DKPFCP 249
            KPFCP
Sbjct: 284 AKPFCP 289


>ref|XP_002526428.1| conserved hypothetical protein [Ricinus communis]
           gi|223534208|gb|EEF35923.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 291

 Score =  395 bits (1016), Expect = e-108
 Identities = 186/240 (77%), Positives = 216/240 (90%)
 Frame = -2

Query: 968 ATLSNTNPTSCSPTCNKIPASISEALIHYTTSTITPQQTLKEISVTSRILDKKSPCNFLV 789
           + L +++  +CS TC+KIP S+++ALIHYTTSTITPQQTLKEISVT+RIL+KKSPCNFLV
Sbjct: 52  SNLDDSSARNCSSTCSKIPRSLAQALIHYTTSTITPQQTLKEISVTARILEKKSPCNFLV 111

Query: 788 FGLGHDSLMWTTLNFGGRTIFLEEDESWITQIKHRFPTLESYHVTYDSKVHQADGLMEVG 609
           FGLGHDSLMW TLN+GGRTIFLEEDESWI+QI+ RFP LESYHVTYDSKV+QAD LM+VG
Sbjct: 112 FGLGHDSLMWNTLNYGGRTIFLEEDESWISQIRRRFPMLESYHVTYDSKVNQADNLMDVG 171

Query: 608 KGNECTAIGETRYSMCQLALKGLPNVVYDTKWDLIMVDAPTGYHDEAPGRMSAIYTAGMI 429
           KG ECTA+ + + SMCQLALKGLPN VY+ KWDLIMVDAPTGY++EAPGRM+AIYTAGM+
Sbjct: 172 KGPECTALSDPKVSMCQLALKGLPNEVYEIKWDLIMVDAPTGYYEEAPGRMTAIYTAGMM 231

Query: 428 ARNREEGAETDIFVHDVNRVVEDKFSMAFLCEGYMIKQEGRLRHFRIPSHRNNLDKPFCP 249
           ARNR EG +T++FVHDVNR VED+FS AFLCEGYM KQEGRLRHF IPSH + LD+PFCP
Sbjct: 232 ARNRPEG-KTEVFVHDVNREVEDRFSKAFLCEGYMKKQEGRLRHFTIPSHMDALDRPFCP 290


>ref|NP_172432.1| uncharacterized protein [Arabidopsis thaliana]
           gi|75127062|sp|Q6NMK1.1|GXM1_ARATH RecName:
           Full=Glucuronoxylan 4-O-methyltransferase 1
           gi|38454180|gb|AAR20784.1| At1g09610 [Arabidopsis
           thaliana] gi|44681448|gb|AAS47664.1| At1g09610
           [Arabidopsis thaliana] gi|332190347|gb|AEE28468.1|
           uncharacterized protein [Arabidopsis thaliana]
           gi|408795210|gb|AFU91592.1| glucuronoxylan
           methyltransferase 1 [Arabidopsis thaliana]
          Length = 282

 Score =  390 bits (1001), Expect = e-106
 Identities = 183/243 (75%), Positives = 212/243 (87%), Gaps = 4/243 (1%)
 Frame = -2

Query: 965 TLSNTNPTSCSPTCNKIPASISEALIHYTTSTITPQQTLKEISVTSRILDKKSPCNFLVF 786
           T   T  T CS  CNK+P S+++ALIHY+TS ITPQQTLKEI+V+SR+L KKSPCNFLVF
Sbjct: 40  TPQETRSTRCSGACNKLPRSLAQALIHYSTSVITPQQTLKEIAVSSRVLGKKSPCNFLVF 99

Query: 785 GLGHDSLMWTTLNFGGRTIFLEEDESWITQIKHRFPTLESYHVTYDSKVHQADGLMEVGK 606
           GLGHDSLMW++LN+GGRT+FLEEDE+WI QIK RFP LESYHVTYDSKV+QAD L+EVGK
Sbjct: 100 GLGHDSLMWSSLNYGGRTVFLEEDEAWIKQIKRRFPMLESYHVTYDSKVNQADNLIEVGK 159

Query: 605 GNECTAIGETRYSMCQLALKGLPNVVYDTKWDLIMVDAPTGYHDEAPGRMSAIYTAGMIA 426
           G ECTAIG+ RYSMCQLALKGLP  +Y+T WDLIMVDAPTGY+DEAPGRM+AIYTAGM+A
Sbjct: 160 GPECTAIGDPRYSMCQLALKGLPAEIYETGWDLIMVDAPTGYYDEAPGRMTAIYTAGMMA 219

Query: 425 RNREEGAETDIFVHDVNRVVEDKFSMAFLCEGYMIKQEGRLRHFRIPSHRNNLD----KP 258
           RNR++G ETD+FVHDVNR +EDKFS AFLCEGYM KQEGRLRHF IPS+R+  +    +P
Sbjct: 220 RNRKQGGETDVFVHDVNREIEDKFSKAFLCEGYMKKQEGRLRHFIIPSYRDGSESESNRP 279

Query: 257 FCP 249
           FCP
Sbjct: 280 FCP 282


>gb|AAC33218.1| Similar to cdc2 protein kinases [Arabidopsis thaliana]
          Length = 967

 Score =  390 bits (1001), Expect = e-106
 Identities = 183/243 (75%), Positives = 212/243 (87%), Gaps = 4/243 (1%)
 Frame = -2

Query: 965  TLSNTNPTSCSPTCNKIPASISEALIHYTTSTITPQQTLKEISVTSRILDKKSPCNFLVF 786
            T   T  T CS  CNK+P S+++ALIHY+TS ITPQQTLKEI+V+SR+L KKSPCNFLVF
Sbjct: 725  TPQETRSTRCSGACNKLPRSLAQALIHYSTSVITPQQTLKEIAVSSRVLGKKSPCNFLVF 784

Query: 785  GLGHDSLMWTTLNFGGRTIFLEEDESWITQIKHRFPTLESYHVTYDSKVHQADGLMEVGK 606
            GLGHDSLMW++LN+GGRT+FLEEDE+WI QIK RFP LESYHVTYDSKV+QAD L+EVGK
Sbjct: 785  GLGHDSLMWSSLNYGGRTVFLEEDEAWIKQIKRRFPMLESYHVTYDSKVNQADNLIEVGK 844

Query: 605  GNECTAIGETRYSMCQLALKGLPNVVYDTKWDLIMVDAPTGYHDEAPGRMSAIYTAGMIA 426
            G ECTAIG+ RYSMCQLALKGLP  +Y+T WDLIMVDAPTGY+DEAPGRM+AIYTAGM+A
Sbjct: 845  GPECTAIGDPRYSMCQLALKGLPAEIYETGWDLIMVDAPTGYYDEAPGRMTAIYTAGMMA 904

Query: 425  RNREEGAETDIFVHDVNRVVEDKFSMAFLCEGYMIKQEGRLRHFRIPSHRNNLD----KP 258
            RNR++G ETD+FVHDVNR +EDKFS AFLCEGYM KQEGRLRHF IPS+R+  +    +P
Sbjct: 905  RNRKQGGETDVFVHDVNREIEDKFSKAFLCEGYMKKQEGRLRHFIIPSYRDGSESESNRP 964

Query: 257  FCP 249
            FCP
Sbjct: 965  FCP 967


>emb|CAN78768.1| hypothetical protein VITISV_006251 [Vitis vinifera]
          Length = 237

 Score =  387 bits (993), Expect = e-105
 Identities = 183/231 (79%), Positives = 201/231 (87%)
 Frame = -2

Query: 941 SCSPTCNKIPASISEALIHYTTSTITPQQTLKEISVTSRILDKKSPCNFLVFGLGHDSLM 762
           +CS TC KIP S+++ALIHYTTSTITPQQTLKEI VTSR+L KKSPCNFLVFGLGHDSLM
Sbjct: 7   NCSRTCGKIPPSLAQALIHYTTSTITPQQTLKEIKVTSRVLQKKSPCNFLVFGLGHDSLM 66

Query: 761 WTTLNFGGRTIFLEEDESWITQIKHRFPTLESYHVTYDSKVHQADGLMEVGKGNECTAIG 582
           W  LN GGRTIFL+ED  WI QI+ RFP LESYHVTYDSKV+QAD LME GKG ECTAI 
Sbjct: 67  WAALNHGGRTIFLDEDAVWIEQIRRRFPMLESYHVTYDSKVNQADELMEAGKGPECTAIV 126

Query: 581 ETRYSMCQLALKGLPNVVYDTKWDLIMVDAPTGYHDEAPGRMSAIYTAGMIARNREEGAE 402
           + RYSMCQL LKGLP  VYD KWDLIMVDAPTGYHDEAPGRM+AIYTAGM+ARNR +G E
Sbjct: 127 DARYSMCQLGLKGLPGEVYDIKWDLIMVDAPTGYHDEAPGRMTAIYTAGMMARNRADG-E 185

Query: 401 TDIFVHDVNRVVEDKFSMAFLCEGYMIKQEGRLRHFRIPSHRNNLDKPFCP 249
           TD+FVHDVNRVVEDKFS  FLC+GYM KQEGR RHF IPSHR+ +++PFCP
Sbjct: 186 TDVFVHDVNRVVEDKFSKEFLCDGYMKKQEGRXRHFTIPSHRDGMERPFCP 236