BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00028212
         (1208 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI36035.3| unnamed protein product [Vitis vinifera]              613   e-173
ref|XP_002277638.1| PREDICTED: DNA repair protein RadA homolog [...   613   e-173
ref|XP_002299746.1| predicted protein [Populus trichocarpa] gi|2...   593   e-167
emb|CAN82495.1| hypothetical protein VITISV_033044 [Vitis vinifera]   575   e-162
ref|NP_199845.3| ATP binding / damaged DNA binding / nucleoside-...   561   e-158

>emb|CBI36035.3| unnamed protein product [Vitis vinifera]
          Length = 583

 Score =  613 bits (1580), Expect = e-173
 Identities = 306/389 (78%), Positives = 339/389 (87%)
 Frame = +3

Query: 42   KTSWVCESCGYTDGQWWGSCRSCNSAGTMKRFSEGDYGEEGKITGGFGVSEKVARTWLPQ 221
            K  WVC  CGY+DGQWWG+CR CN  GTMK+FS G+ G  G    GF VS+ V R+WLPQ
Sbjct: 105  KVCWVCSDCGYSDGQWWGACRECNKVGTMKQFSAGESGNGGSRVSGFEVSDNVVRSWLPQ 164

Query: 222  QLGDAGPMKLTEVNRGVDQKEWRIPLSGLFGNEVARVLGGGIVPGSLVLVGGDPGVGKST 401
            Q  +  P++LT+VNRG++Q  WRIPL G FG EVARVLGGG+VPGSLVLVGGDPG GKST
Sbjct: 165  QPTEVQPLRLTDVNRGINQMNWRIPLHGPFGYEVARVLGGGLVPGSLVLVGGDPGAGKST 224

Query: 402  LLLQIAAIIAEGHEMRQSAAVVYISGEESIEQIGNRADRMGIWTEELFLYSSTDVEDILD 581
            LLLQIAAIIAEGH++  S+ VVY+SGEES+EQIGNRADRM I TEELFLYSSTD+EDIL 
Sbjct: 225  LLLQIAAIIAEGHDIGGSSPVVYVSGEESVEQIGNRADRMRIDTEELFLYSSTDIEDILG 284

Query: 582  KAQPLSPRALIVDSIQTVYLKGVTGSPGGLSQVKECTSALLRFAKKTNIPVFLIGHVNKS 761
            +   LSPRAL+VDSIQTVYLKGV GS GGLSQVKECTSALLRFAKKTNIPVFLIGHV KS
Sbjct: 285  QVHLLSPRALVVDSIQTVYLKGVIGSAGGLSQVKECTSALLRFAKKTNIPVFLIGHVTKS 344

Query: 762  GDIAGPRVLEHIVDAVLYLEGEKHSSHRLLRSVKNRFGSTDELGVFEMSQSGLQAVSNPS 941
            GDIAGPRVLEHIVD VLY+EGEKHSSHRLLRSVKNRFGSTDELGVFEM+Q GLQ VSNPS
Sbjct: 345  GDIAGPRVLEHIVDVVLYMEGEKHSSHRLLRSVKNRFGSTDELGVFEMTQLGLQVVSNPS 404

Query: 942  EIFLSQQQTDSEVLAGLAVTVIMDGSRSFLIEIQALCVSGSTNSRQVNGLHASRADMIIS 1121
            E+FLS+Q +DSE+L GLAV VIMDGSRSFL+EIQALC+SGST +RQVNG+ ASRADMII+
Sbjct: 405  ELFLSEQNSDSEILTGLAVAVIMDGSRSFLLEIQALCLSGSTVARQVNGVPASRADMIIA 464

Query: 1122 VLMKQAGLKLQENGIFLNVVSGYTLNETA 1208
            VLMKQAGLKLQ+NGIFLNVVSG TL ETA
Sbjct: 465  VLMKQAGLKLQDNGIFLNVVSGVTLAETA 493


>ref|XP_002277638.1| PREDICTED: DNA repair protein RadA homolog [Vitis vinifera]
          Length = 624

 Score =  613 bits (1580), Expect = e-173
 Identities = 306/389 (78%), Positives = 339/389 (87%)
 Frame = +3

Query: 42   KTSWVCESCGYTDGQWWGSCRSCNSAGTMKRFSEGDYGEEGKITGGFGVSEKVARTWLPQ 221
            K  WVC  CGY+DGQWWG+CR CN  GTMK+FS G+ G  G    GF VS+ V R+WLPQ
Sbjct: 146  KVCWVCSDCGYSDGQWWGACRECNKVGTMKQFSAGESGNGGSRVSGFEVSDNVVRSWLPQ 205

Query: 222  QLGDAGPMKLTEVNRGVDQKEWRIPLSGLFGNEVARVLGGGIVPGSLVLVGGDPGVGKST 401
            Q  +  P++LT+VNRG++Q  WRIPL G FG EVARVLGGG+VPGSLVLVGGDPG GKST
Sbjct: 206  QPTEVQPLRLTDVNRGINQMNWRIPLHGPFGYEVARVLGGGLVPGSLVLVGGDPGAGKST 265

Query: 402  LLLQIAAIIAEGHEMRQSAAVVYISGEESIEQIGNRADRMGIWTEELFLYSSTDVEDILD 581
            LLLQIAAIIAEGH++  S+ VVY+SGEES+EQIGNRADRM I TEELFLYSSTD+EDIL 
Sbjct: 266  LLLQIAAIIAEGHDIGGSSPVVYVSGEESVEQIGNRADRMRIDTEELFLYSSTDIEDILG 325

Query: 582  KAQPLSPRALIVDSIQTVYLKGVTGSPGGLSQVKECTSALLRFAKKTNIPVFLIGHVNKS 761
            +   LSPRAL+VDSIQTVYLKGV GS GGLSQVKECTSALLRFAKKTNIPVFLIGHV KS
Sbjct: 326  QVHLLSPRALVVDSIQTVYLKGVIGSAGGLSQVKECTSALLRFAKKTNIPVFLIGHVTKS 385

Query: 762  GDIAGPRVLEHIVDAVLYLEGEKHSSHRLLRSVKNRFGSTDELGVFEMSQSGLQAVSNPS 941
            GDIAGPRVLEHIVD VLY+EGEKHSSHRLLRSVKNRFGSTDELGVFEM+Q GLQ VSNPS
Sbjct: 386  GDIAGPRVLEHIVDVVLYMEGEKHSSHRLLRSVKNRFGSTDELGVFEMTQLGLQVVSNPS 445

Query: 942  EIFLSQQQTDSEVLAGLAVTVIMDGSRSFLIEIQALCVSGSTNSRQVNGLHASRADMIIS 1121
            E+FLS+Q +DSE+L GLAV VIMDGSRSFL+EIQALC+SGST +RQVNG+ ASRADMII+
Sbjct: 446  ELFLSEQNSDSEILTGLAVAVIMDGSRSFLLEIQALCLSGSTVARQVNGVPASRADMIIA 505

Query: 1122 VLMKQAGLKLQENGIFLNVVSGYTLNETA 1208
            VLMKQAGLKLQ+NGIFLNVVSG TL ETA
Sbjct: 506  VLMKQAGLKLQDNGIFLNVVSGVTLAETA 534


>ref|XP_002299746.1| predicted protein [Populus trichocarpa] gi|222847004|gb|EEE84551.1|
            predicted protein [Populus trichocarpa]
          Length = 525

 Score =  593 bits (1528), Expect = e-167
 Identities = 299/389 (76%), Positives = 333/389 (85%)
 Frame = +3

Query: 42   KTSWVCESCGYTDGQWWGSCRSCNSAGTMKRFSEGDYGEEGKITGGFGVSEKVARTWLPQ 221
            KTSWVCE CG+T GQWWGSCRSCN  GTMK+F E   G   K++G    SE   R+WLPQ
Sbjct: 47   KTSWVCEICGFTSGQWWGSCRSCNEVGTMKQFFEAKIGSGNKVSG-IEASENAVRSWLPQ 105

Query: 222  QLGDAGPMKLTEVNRGVDQKEWRIPLSGLFGNEVARVLGGGIVPGSLVLVGGDPGVGKST 401
            + G+  P++LT+VNRG++   WRIPLSGLFG+EV RVLGGG+VPGSLVLVGGDPGVGKST
Sbjct: 106  KPGELRPLRLTDVNRGMNMLNWRIPLSGLFGSEVERVLGGGLVPGSLVLVGGDPGVGKST 165

Query: 402  LLLQIAAIIAEGHEMRQSAAVVYISGEESIEQIGNRADRMGIWTEELFLYSSTDVEDILD 581
            LLLQ+AAIIA+  +   SA VVY+SGEES+EQIGNRADRM I TEEL+LYSSTD+EDIL 
Sbjct: 166  LLLQVAAIIADSEDPGGSAPVVYVSGEESVEQIGNRADRMEIGTEELYLYSSTDIEDILG 225

Query: 582  KAQPLSPRALIVDSIQTVYLKGVTGSPGGLSQVKECTSALLRFAKKTNIPVFLIGHVNKS 761
            K Q LSPRALI+DSIQTVYLKGV GS GGLSQVKECTSALLRFAK TNIP+ LIGHVNKS
Sbjct: 226  KIQHLSPRALIIDSIQTVYLKGVAGSAGGLSQVKECTSALLRFAKTTNIPILLIGHVNKS 285

Query: 762  GDIAGPRVLEHIVDAVLYLEGEKHSSHRLLRSVKNRFGSTDELGVFEMSQSGLQAVSNPS 941
            GDIAGPRVLEHIVD VLY+EGEK+SSHRLLR VKNRFGSTDELGVFEMSQ GL  VSNPS
Sbjct: 286  GDIAGPRVLEHIVDVVLYMEGEKYSSHRLLRPVKNRFGSTDELGVFEMSQLGLAVVSNPS 345

Query: 942  EIFLSQQQTDSEVLAGLAVTVIMDGSRSFLIEIQALCVSGSTNSRQVNGLHASRADMIIS 1121
            EIFL++Q +DS+ LAGLAV VIMDGSRSFLIEIQALCVSGS+ SR +NG+ +SRADMIIS
Sbjct: 346  EIFLTEQHSDSDFLAGLAVAVIMDGSRSFLIEIQALCVSGSSVSRHINGIQSSRADMIIS 405

Query: 1122 VLMKQAGLKLQENGIFLNVVSGYTLNETA 1208
            VL+KQAGL LQEN IFLNVVSG  L ETA
Sbjct: 406  VLIKQAGLMLQENAIFLNVVSGVMLTETA 434


>emb|CAN82495.1| hypothetical protein VITISV_033044 [Vitis vinifera]
          Length = 647

 Score =  575 bits (1482), Expect = e-162
 Identities = 296/391 (75%), Positives = 329/391 (84%), Gaps = 2/391 (0%)
 Frame = +3

Query: 42   KTSWVCESCGYTDGQWWGSCRSCNSAGTMKRFSEGDYGEEGKITGGFGVSEKVARTWLPQ 221
            K  WVC  CG++DG WWG+CR CN  GTMK+FSEG+ G  G    GF VSE + R+WLPQ
Sbjct: 146  KVFWVCSDCGHSDGHWWGACRECNKVGTMKQFSEGESGIGGSRASGFEVSENMVRSWLPQ 205

Query: 222  QLGDAGPMKLTEVNRGVDQKEWRIPLSGLFGNEVARVLGGGIVPGSLVLVGGDPGVGKST 401
            Q  +  P +LT+VNRG++Q  WRIPL G FG+EVARVLGGG+VPGSLVLVGGDPG GKST
Sbjct: 206  QPTETQPQRLTDVNRGINQLNWRIPLHGPFGSEVARVLGGGLVPGSLVLVGGDPGAGKST 265

Query: 402  LLLQIAAIIAEGHEMRQSAAVVYISGEESIEQIGNRADRMGIWTEELFLYSSTDVEDILD 581
            LLLQIAAIIAEGH+ R S+ VVY+SGEES+EQIGNRADRM I TE+LFLYSSTD+EDIL 
Sbjct: 266  LLLQIAAIIAEGHDDR-SSPVVYVSGEESVEQIGNRADRMRIETEDLFLYSSTDIEDILG 324

Query: 582  KAQPLSPRALIVDSIQTVYLKGVTGSPGGLSQVKECTSALLRFAKKTNIPVFLIGHVNKS 761
            +   LSPRAL+VDSIQTVYLKGVTGS GGL QVKECTSALLRFAKKTNIPVFLIGHV KS
Sbjct: 325  QVHHLSPRALVVDSIQTVYLKGVTGSAGGLLQVKECTSALLRFAKKTNIPVFLIGHVTKS 384

Query: 762  GDIAGPRVLEHIVDAVLYLEGEKHSSHRLLRSVKNRFGSTDELGVFEMSQSGLQAVSNPS 941
            GDIAGPRVLEHIVD      GEKHSSHRLLRSVKNRFGSTDELGVFEM+Q GLQ VSNPS
Sbjct: 385  GDIAGPRVLEHIVD------GEKHSSHRLLRSVKNRFGSTDELGVFEMTQLGLQVVSNPS 438

Query: 942  EIFLSQQQTDSEVLAGLAVTVIMDGSRSFLIEIQALCVSGSTNSRQVNG--LHASRADMI 1115
            E+FLS++ +DSE+LAGLAV VIMDGSRSFL+EIQALC+SG   +RQV G  +   RA+MI
Sbjct: 439  ELFLSERNSDSEILAGLAVAVIMDGSRSFLLEIQALCLSGIIFARQVKGVPVPVRRAEMI 498

Query: 1116 ISVLMKQAGLKLQENGIFLNVVSGYTLNETA 1208
            I VLMKQAGLKLQENGIFLNVVSG TL ETA
Sbjct: 499  IPVLMKQAGLKLQENGIFLNVVSGVTLAETA 529


>ref|NP_199845.3| ATP binding / damaged DNA binding / nucleoside-triphosphatase/
            nucleotide binding protein [Arabidopsis thaliana]
            gi|110741561|dbj|BAE98729.1| DNA repair protein-like
            [Arabidopsis thaliana] gi|332008546|gb|AED95929.1| ATP
            binding / damaged DNA binding /
            nucleoside-triphosphatase/ nucleotide binding protein
            [Arabidopsis thaliana]
          Length = 587

 Score =  561 bits (1447), Expect = e-158
 Identities = 282/392 (71%), Positives = 331/392 (84%), Gaps = 3/392 (0%)
 Frame = +3

Query: 42   KTSWVCESCGYTDGQWWGSCRSCNSAGTMKRFSEGDYGEEGKITG---GFGVSEKVARTW 212
            KT WVCESCG+++GQWWGSCR+C+  GTMKRFSEG         G   G G +E    +W
Sbjct: 106  KTVWVCESCGHSEGQWWGSCRACHKVGTMKRFSEGSESSASGGGGNGTGLGFTEGKGLSW 165

Query: 213  LPQQLGDAGPMKLTEVNRGVDQKEWRIPLSGLFGNEVARVLGGGIVPGSLVLVGGDPGVG 392
            LP+Q     P +LT+V  G+ Q++WRI L GLFGNEVARVLGGG+ PGSL+L+GGDPG+G
Sbjct: 166  LPEQ-ATVQPHRLTDVIHGITQQQWRISLPGLFGNEVARVLGGGLAPGSLILIGGDPGIG 224

Query: 393  KSTLLLQIAAIIAEGHEMRQSAAVVYISGEESIEQIGNRADRMGIWTEELFLYSSTDVED 572
            KSTLLLQIA+IIAEG E+ + A V+YISGEES+EQIG+RADRM I TEEL+L+SS+D++D
Sbjct: 225  KSTLLLQIASIIAEGSELAEPAPVLYISGEESVEQIGSRADRMRIQTEELYLFSSSDLQD 284

Query: 573  ILDKAQPLSPRALIVDSIQTVYLKGVTGSPGGLSQVKECTSALLRFAKKTNIPVFLIGHV 752
            IL+KA  LSPRALI+DSIQTVYLK VTGS GGL+QVKECTS LLRFAKK+NIPVFL+GHV
Sbjct: 285  ILNKAHRLSPRALIIDSIQTVYLKDVTGSAGGLTQVKECTSTLLRFAKKSNIPVFLVGHV 344

Query: 753  NKSGDIAGPRVLEHIVDAVLYLEGEKHSSHRLLRSVKNRFGSTDELGVFEMSQSGLQAVS 932
             K+GDIAGPRVLEHIVD VLYLEGE+ S++RLLRSVKNRFGSTDELGVFEM+ SGL+ VS
Sbjct: 345  TKAGDIAGPRVLEHIVDVVLYLEGEESSTYRLLRSVKNRFGSTDELGVFEMANSGLEVVS 404

Query: 933  NPSEIFLSQQQTDSEVLAGLAVTVIMDGSRSFLIEIQALCVSGSTNSRQVNGLHASRADM 1112
            NPS I+LSQQ  DS+VLAGLAV V+MDGSRSFLIE+QALC  GST SR VNG+ ASRADM
Sbjct: 405  NPSGIYLSQQNPDSDVLAGLAVAVVMDGSRSFLIEVQALCSPGSTVSRHVNGVQASRADM 464

Query: 1113 IISVLMKQAGLKLQENGIFLNVVSGYTLNETA 1208
            II+VLMKQAGL++QENGIFLNV +G  L+ETA
Sbjct: 465  IIAVLMKQAGLRIQENGIFLNVANGMALSETA 496