BLASTX nr result

ID: Bupleurum21_contig00028198 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00028198
         (548 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002313095.1| predicted protein [Populus trichocarpa] gi|2...    96   5e-18
ref|XP_002284992.1| PREDICTED: sodium channel modifier 1 [Vitis ...    94   1e-17
ref|NP_001062045.1| Os08g0477600 [Oryza sativa Japonica Group] g...    87   2e-15
gb|EAZ43082.1| hypothetical protein OsJ_27672 [Oryza sativa Japo...    87   2e-15
gb|EAZ07353.1| hypothetical protein OsI_29603 [Oryza sativa Indi...    87   2e-15

>ref|XP_002313095.1| predicted protein [Populus trichocarpa] gi|222849503|gb|EEE87050.1|
           predicted protein [Populus trichocarpa]
          Length = 225

 Score = 95.5 bits (236), Expect = 5e-18
 Identities = 50/120 (41%), Positives = 72/120 (60%), Gaps = 3/120 (2%)
 Frame = +1

Query: 1   PLTQRTMKAVSEALGATSAQQSLPTTN---NVEYTWNRITNASSSTYDTNNIVEIVADKQ 171
           PL ++T KA +E LG  +A+ S    N    +   +  I N  +   + ++  E++A ++
Sbjct: 114 PLIEKTKKAATEILGKGTARLSSKNQNCDLKLSVGYVNIMNVVTKICENSSCPEVIASEK 173

Query: 172 ALQQFDYKEQVPPQQQLDYKERQEKELKFKAAGWKRDGFGGWYKDDNVEFDSDEEDPNVC 351
            L Q          Q LD++ER+E+ELKF  AGWKRD  G W++D+NVEFDSDEEDPNVC
Sbjct: 174 MLVQ----------QHLDFRERRERELKFTEAGWKRDCHGRWFRDENVEFDSDEEDPNVC 223



 Score = 55.8 bits (133), Expect = 4e-06
 Identities = 30/61 (49%), Positives = 38/61 (62%)
 Frame = +3

Query: 345 CLFCGRSELFKHVKILCLIDAICKMHMKGSRHCAAESRLKERELSRQCEINKRIALSGNS 524
           CL C  + + +    L        MH KGSRH AAES+LKE+EL RQ EINKR+ALS + 
Sbjct: 43  CLVCPHNPVLESPLAL-------SMHCKGSRHIAAESKLKEKELMRQSEINKRLALSESD 95

Query: 525 I 527
           +
Sbjct: 96  V 96


>ref|XP_002284992.1| PREDICTED: sodium channel modifier 1 [Vitis vinifera]
           gi|297741323|emb|CBI32454.3| unnamed protein product
           [Vitis vinifera]
          Length = 223

 Score = 94.4 bits (233), Expect = 1e-17
 Identities = 50/119 (42%), Positives = 70/119 (58%)
 Frame = +1

Query: 1   PLTQRTMKAVSEALGATSAQQSLPTTNNVEYTWNRITNASSSTYDTNNIVEIVADKQALQ 180
           PL ++T KA SE L     +Q++   ++         NA  S  D++N      D  +  
Sbjct: 114 PLIEQTKKAASETLCNKIPKQNVTIQSH---------NAKESRDDSSNGPSNCNDNSSFP 164

Query: 181 QFDYKEQVPPQQQLDYKERQEKELKFKAAGWKRDGFGGWYKDDNVEFDSDEEDPNVCFA 357
             +  E+V  Q QLD++  +E+EL+F AAGWKRD  G W+KD+NVEFDSDEEDPN+C A
Sbjct: 165 AMEAGERVVAQHQLDFQAIRERELRFTAAGWKRDCHGRWFKDENVEFDSDEEDPNICLA 223



 Score = 58.9 bits (141), Expect = 5e-07
 Identities = 35/66 (53%), Positives = 38/66 (57%)
 Frame = +3

Query: 345 CLFCGRSELFKHVKILCLIDAICKMHMKGSRHCAAESRLKERELSRQCEINKRIALSGNS 524
           CL C  + +     +L        MH KGSRH AAESR KEREL RQ EI KRIALS  S
Sbjct: 43  CLLCANNPILDSPLML-------SMHRKGSRHRAAESRFKERELRRQDEIKKRIALSDGS 95

Query: 525 IPVGRT 542
           I  G T
Sbjct: 96  IGSGDT 101


>ref|NP_001062045.1| Os08g0477600 [Oryza sativa Japonica Group]
           gi|42407857|dbj|BAD08999.1| unknown protein [Oryza
           sativa Japonica Group] gi|113624014|dbj|BAF23959.1|
           Os08g0477600 [Oryza sativa Japonica Group]
          Length = 244

 Score = 86.7 bits (213), Expect = 2e-15
 Identities = 48/125 (38%), Positives = 74/125 (59%), Gaps = 8/125 (6%)
 Frame = +1

Query: 1   PLTQRTMKAVSEALGATSAQQSLPTTNNVEYTWNRITNASSSTYDTNNIVEIVADKQALQ 180
           PL Q+T +A+ EA    S++  + + N   +   R +N  SS  D+     +  +K +  
Sbjct: 123 PLIQQTRQAILEA---QSSRFIIDSANKKSHDLERTSN--SSLCDSQVTPSVPMEKWSGD 177

Query: 181 QFDYK--------EQVPPQQQLDYKERQEKELKFKAAGWKRDGFGGWYKDDNVEFDSDEE 336
               K         ++  ++Q D+++RQE+ELKF A+GWKRDG G WY+D+NVEFDSDE+
Sbjct: 178 TVKGKIFAGDRTATKMLAEEQADFQKRQEQELKFTASGWKRDGHGRWYRDENVEFDSDED 237

Query: 337 DPNVC 351
           DPN+C
Sbjct: 238 DPNIC 242



 Score = 54.7 bits (130), Expect = 9e-06
 Identities = 26/33 (78%), Positives = 30/33 (90%)
 Frame = +3

Query: 417 MHMKGSRHCAAESRLKERELSRQCEINKRIALS 515
           MH KGSRH AAESRL+E+ELSRQ EINKR+A+S
Sbjct: 67  MHNKGSRHIAAESRLREKELSRQQEINKRLAIS 99


>gb|EAZ43082.1| hypothetical protein OsJ_27672 [Oryza sativa Japonica Group]
          Length = 442

 Score = 86.7 bits (213), Expect = 2e-15
 Identities = 48/125 (38%), Positives = 74/125 (59%), Gaps = 8/125 (6%)
 Frame = +1

Query: 1   PLTQRTMKAVSEALGATSAQQSLPTTNNVEYTWNRITNASSSTYDTNNIVEIVADKQALQ 180
           PL Q+T +A+ EA    S++  + + N   +   R +N  SS  D+     +  +K +  
Sbjct: 321 PLIQQTRQAILEA---QSSRFIIDSANKKSHDLERTSN--SSLCDSQVTPSVPMEKWSGD 375

Query: 181 QFDYK--------EQVPPQQQLDYKERQEKELKFKAAGWKRDGFGGWYKDDNVEFDSDEE 336
               K         ++  ++Q D+++RQE+ELKF A+GWKRDG G WY+D+NVEFDSDE+
Sbjct: 376 TVKGKIFAGDRTATKMLAEEQADFQKRQEQELKFTASGWKRDGHGRWYRDENVEFDSDED 435

Query: 337 DPNVC 351
           DPN+C
Sbjct: 436 DPNIC 440



 Score = 54.7 bits (130), Expect = 9e-06
 Identities = 26/33 (78%), Positives = 30/33 (90%)
 Frame = +3

Query: 417 MHMKGSRHCAAESRLKERELSRQCEINKRIALS 515
           MH KGSRH AAESRL+E+ELSRQ EINKR+A+S
Sbjct: 265 MHNKGSRHIAAESRLREKELSRQQEINKRLAIS 297


>gb|EAZ07353.1| hypothetical protein OsI_29603 [Oryza sativa Indica Group]
          Length = 244

 Score = 86.7 bits (213), Expect = 2e-15
 Identities = 48/125 (38%), Positives = 74/125 (59%), Gaps = 8/125 (6%)
 Frame = +1

Query: 1   PLTQRTMKAVSEALGATSAQQSLPTTNNVEYTWNRITNASSSTYDTNNIVEIVADKQALQ 180
           PL Q+T +A+ EA    S++  + + N   +   R +N  SS  D+     +  +K +  
Sbjct: 123 PLIQQTRQAILEA---QSSRFIIDSANKKSHDLERTSN--SSLCDSQVTPSVPMEKWSGD 177

Query: 181 QFDYK--------EQVPPQQQLDYKERQEKELKFKAAGWKRDGFGGWYKDDNVEFDSDEE 336
               K         ++  ++Q D+++RQE+ELKF A+GWKRDG G WY+D+NVEFDSDE+
Sbjct: 178 TVKGKIFAGDRTATKMLAEEQADFQKRQEQELKFTASGWKRDGHGRWYRDENVEFDSDED 237

Query: 337 DPNVC 351
           DPN+C
Sbjct: 238 DPNIC 242



 Score = 54.7 bits (130), Expect = 9e-06
 Identities = 26/33 (78%), Positives = 30/33 (90%)
 Frame = +3

Query: 417 MHMKGSRHCAAESRLKERELSRQCEINKRIALS 515
           MH KGSRH AAESRL+E+ELSRQ EINKR+A+S
Sbjct: 67  MHNKGSRHIAAESRLREKELSRQQEINKRLAIS 99


Top