BLASTX nr result

ID: Bupleurum21_contig00028197 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00028197
         (312 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI31635.3| unnamed protein product [Vitis vinifera]              113   2e-23
ref|XP_004138579.1| PREDICTED: uncharacterized protein LOC101220...   112   4e-23
ref|XP_002315207.1| predicted protein [Populus trichocarpa] gi|2...   108   3e-22
gb|AFK35010.1| unknown [Lotus japonicus]                              108   6e-22
ref|XP_002312114.1| predicted protein [Populus trichocarpa] gi|2...   104   8e-21

>emb|CBI31635.3| unnamed protein product [Vitis vinifera]
          Length = 492

 Score =  113 bits (282), Expect = 2e-23
 Identities = 56/102 (54%), Positives = 74/102 (72%), Gaps = 2/102 (1%)
 Frame = -3

Query: 301 LEIPLQTFKTWRSWGNGPFTFNTRPVSSNPCDQPFIYYLDWAKEVSKTETLTSYKRFVIE 122
           L+ PLQTF+TWRS   GPFTFNTR V+S+PC+QP IY+L+  +EV+K ET++SY R V +
Sbjct: 374 LDKPLQTFQTWRSRSQGPFTFNTRQVTSDPCEQPVIYFLEEVREVAKGETMSSYGRAVAQ 433

Query: 121 SPKTCKGKVDYR--RTVEKILVSASKMDPQEFVKGPRRQCSE 2
             K C+ + DY     V++I VS  KM PQ++ K PRRQCSE
Sbjct: 434 PEKACQ-RPDYAPVMAVQRIKVSTLKMSPQDWKKAPRRQCSE 474


>ref|XP_004138579.1| PREDICTED: uncharacterized protein LOC101220661 [Cucumis sativus]
          Length = 2819

 Score =  112 bits (279), Expect = 4e-23
 Identities = 54/104 (51%), Positives = 75/104 (72%), Gaps = 2/104 (1%)
 Frame = -3

Query: 307 TDLEIPLQTFKTWRSWGNGPFTFNTRPVSSNPCDQPFIYYLDWAKEVSKTETLTSYKRFV 128
           TD++IP QTFKTWRS  +GPF FNTRPVSS+PC +P +Y+L   +EV    T T+Y+RFV
Sbjct: 368 TDMQIPFQTFKTWRSSSDGPFDFNTRPVSSDPCWRPVVYFLKQVQEVDTRGTKTTYERFV 427

Query: 127 IESPKTCKGKVDYRR--TVEKILVSASKMDPQEFVKGPRRQCSE 2
           ++  K C+ + DY R   V+++ VS+ KMD Q ++K P+RQC E
Sbjct: 428 VKEEKECE-RNDYARVMAVKQVTVSSMKMDNQLWMKAPQRQCCE 470


>ref|XP_002315207.1| predicted protein [Populus trichocarpa] gi|222864247|gb|EEF01378.1|
           predicted protein [Populus trichocarpa]
          Length = 496

 Score =  108 bits (271), Expect = 3e-22
 Identities = 53/101 (52%), Positives = 68/101 (67%), Gaps = 1/101 (0%)
 Frame = -3

Query: 301 LEIPLQTFKTWRSWGNGPFTFNTRPVSSNPCDQPFIYYLDWAKEVSKTETLTSYKRFVIE 122
           L+ P QTFKTWRSW +GPFTFNTRP   +PC QP ++ L+ AKE     +L+SYKR V E
Sbjct: 366 LQTPEQTFKTWRSWSDGPFTFNTRPTEPDPCKQPVVFMLEQAKEGGVNGSLSSYKRIVHE 425

Query: 121 SPKTCK-GKVDYRRTVEKILVSASKMDPQEFVKGPRRQCSE 2
             KTCK  +     +V++ILVS+ KM+P  + K PRR C E
Sbjct: 426 PGKTCKTTQYAQAMSVQRILVSSLKMEPDYWKKAPRRYCCE 466


>gb|AFK35010.1| unknown [Lotus japonicus]
          Length = 200

 Score =  108 bits (269), Expect = 6e-22
 Identities = 49/103 (47%), Positives = 71/103 (68%)
 Frame = -3

Query: 310 PTDLEIPLQTFKTWRSWGNGPFTFNTRPVSSNPCDQPFIYYLDWAKEVSKTETLTSYKRF 131
           P DL++PLQTF+TWRS  +GPFTFN RP+S +PC QP +++LD   +V  + ++T Y+R+
Sbjct: 72  PADLQMPLQTFRTWRSSSDGPFTFNARPMSHDPCQQPAVFFLDHVVKVGSSGSITIYERY 131

Query: 130 VIESPKTCKGKVDYRRTVEKILVSASKMDPQEFVKGPRRQCSE 2
           V +  K CKG  D    V++I VSA  +DP+ +   PRRQC +
Sbjct: 132 VADEAKKCKG-ADNTIEVQRIRVSALTLDPEYWKNVPRRQCCQ 173


>ref|XP_002312114.1| predicted protein [Populus trichocarpa] gi|222851934|gb|EEE89481.1|
           predicted protein [Populus trichocarpa]
          Length = 495

 Score =  104 bits (259), Expect = 8e-21
 Identities = 50/102 (49%), Positives = 67/102 (65%), Gaps = 1/102 (0%)
 Frame = -3

Query: 304 DLEIPLQTFKTWRSWGNGPFTFNTRPVSSNPCDQPFIYYLDWAKEVSKTETLTSYKRFVI 125
           DL+ P++TFKTWRSW +GPFTFNTRP  ++ C QP ++ L+ AKEV    +LTSY R V 
Sbjct: 366 DLQTPVRTFKTWRSWSDGPFTFNTRPTEADHCKQPVVFMLEQAKEVGINGSLTSYTRIVQ 425

Query: 124 ESPKTCK-GKVDYRRTVEKILVSASKMDPQEFVKGPRRQCSE 2
           +  KTC         +V++ILVS+ K+ P  + K PRR C E
Sbjct: 426 KPGKTCNTASYAQAMSVQRILVSSLKVGPDYWKKAPRRYCCE 467


Top