BLASTX nr result

ID: Bupleurum21_contig00028190 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00028190
         (278 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002531852.1| zinc finger protein, putative [Ricinus commu...    74   1e-11
ref|XP_002283706.1| PREDICTED: dof zinc finger protein DOF5.2-li...    74   2e-11
gb|ADL36682.1| DOF domain class transcription factor [Malus x do...    70   2e-10
ref|XP_004168502.1| PREDICTED: dof zinc finger protein DOF5.2-li...    69   3e-10
ref|XP_004147502.1| PREDICTED: dof zinc finger protein DOF5.2-li...    69   4e-10

>ref|XP_002531852.1| zinc finger protein, putative [Ricinus communis]
           gi|223528502|gb|EEF30530.1| zinc finger protein,
           putative [Ricinus communis]
          Length = 497

 Score = 73.9 bits (180), Expect = 1e-11
 Identities = 43/94 (45%), Positives = 56/94 (59%), Gaps = 9/94 (9%)
 Frame = -2

Query: 268 CPTPNTWNMRCLA--PQCELSVTSPCPNSRTLGKRSRDESVISLSN----PEKVKQE--- 116
           C  P TWNM  +   P    + ++  PNS TLGK SRD++++  SN    PEK K     
Sbjct: 361 CTVPGTWNMSWIPQPPSPNETASTSGPNSPTLGKHSRDDNMLKPSNSGETPEKEKSAERC 420

Query: 115 VMSPKALRIHDQSEAAQSSIWLTLGIESDDTDSV 14
           +  PK LRI D  EAA+SSIW TLGI++D  DS+
Sbjct: 421 LWIPKTLRIDDPGEAAKSSIWTTLGIKNDRPDSI 454


>ref|XP_002283706.1| PREDICTED: dof zinc finger protein DOF5.2-like [Vitis vinifera]
          Length = 511

 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 43/99 (43%), Positives = 59/99 (59%), Gaps = 10/99 (10%)
 Frame = -2

Query: 268 CPTPNTWNMRCLAPQCELSVTSPC--PNSRTLGKRSRDESVISLSN--PEKVKQEVMS-- 107
           C  P  WN+  +     L+ T+P   PNS TLGK SRDE+++  SN   E++++E  S  
Sbjct: 374 CTVPGAWNIPWVPQPSALNHTAPSSGPNSPTLGKHSRDENMLKASNFGEEELQKENNSER 433

Query: 106 ----PKALRIHDQSEAAQSSIWLTLGIESDDTDSVNEAR 2
               PK LRI D  EAA+SSIW TLGI++D  D ++  R
Sbjct: 434 CLWIPKTLRIDDPGEAARSSIWATLGIKNDKADPISGGR 472


>gb|ADL36682.1| DOF domain class transcription factor [Malus x domestica]
          Length = 465

 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 45/93 (48%), Positives = 53/93 (56%), Gaps = 11/93 (11%)
 Frame = -2

Query: 274 PY--CPTPNTWNMRCLAPQ-CELSVTSP--CPNSRTLGKRSRDESVISLSNPEKVKQE-- 116
           PY  C  P TWN+    PQ    +  SP    NS TLGK SRDE V+   N EK +    
Sbjct: 328 PYWNCGVPGTWNVPWFGPQPATPNQKSPHSSSNSPTLGKHSRDEDVVRPENLEKEEPSRQ 387

Query: 115 ----VMSPKALRIHDQSEAAQSSIWLTLGIESD 29
               V+ PK LRI D SEAA+SSIW TLGI++D
Sbjct: 388 KNGCVLVPKTLRIDDPSEAAKSSIWATLGIKND 420


>ref|XP_004168502.1| PREDICTED: dof zinc finger protein DOF5.2-like [Cucumis sativus]
          Length = 502

 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 42/97 (43%), Positives = 55/97 (56%), Gaps = 10/97 (10%)
 Frame = -2

Query: 268 CPTPNTWNMRCLAPQCELSVT--SPCPNSRTLGKRSRDESVISLSN--------PEKVKQ 119
           C  P  W +  ++    LS    +  PNS TLGK SRDE+V   S+          K ++
Sbjct: 365 CTVPGAWPIPWVSQPPSLSPVPQNHAPNSPTLGKHSRDENVTKQSDFGEDEQQKDTKTEK 424

Query: 118 EVMSPKALRIHDQSEAAQSSIWLTLGIESDDTDSVNE 8
            +  PK LRI D  EAA+SSIW TLGI++D TDSV+E
Sbjct: 425 CLWIPKTLRIDDPGEAAKSSIWATLGIKNDKTDSVSE 461


>ref|XP_004147502.1| PREDICTED: dof zinc finger protein DOF5.2-like [Cucumis sativus]
          Length = 502

 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 42/97 (43%), Positives = 56/97 (57%), Gaps = 10/97 (10%)
 Frame = -2

Query: 268 CPTPNTWNMRCLAPQCELSVT--SPCPNSRTLGKRSRDESVISLSNPEKVKQE------- 116
           C  P  W +  ++    LS    +  PNS TLGK SRDE+V   S+  + +Q+       
Sbjct: 365 CTVPGAWPIPWVSQPPSLSPVPQNHAPNSPTLGKHSRDENVTRQSDLGEDEQQKDTKTEK 424

Query: 115 -VMSPKALRIHDQSEAAQSSIWLTLGIESDDTDSVNE 8
            +  PK LRI D  EAA+SSIW TLGI++D TDSV+E
Sbjct: 425 CLWIPKTLRIDDPGEAAKSSIWATLGIKNDKTDSVSE 461


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