BLASTX nr result

ID: Bupleurum21_contig00028184 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00028184
         (372 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFZ78610.1| helix-loop-helix protein [Populus tomentosa]           121   5e-26
ref|XP_002319028.1| predicted protein [Populus trichocarpa] gi|2...   120   2e-25
gb|ABK92747.1| unknown [Populus trichocarpa]                          120   2e-25
ref|XP_002328413.1| predicted protein [Populus trichocarpa] gi|2...   119   2e-25
ref|XP_002281083.2| PREDICTED: transcription factor bHLH96-like ...   115   3e-24

>gb|AFZ78610.1| helix-loop-helix protein [Populus tomentosa]
          Length = 343

 Score =  121 bits (304), Expect = 5e-26
 Identities = 63/96 (65%), Positives = 78/96 (81%)
 Frame = -2

Query: 371 HSSGAAMADIEVTMVESHANMKIRSKSKPKQLLILVNELQILRLTVLHLSVTTVNHVVLY 192
           H + + +ADIEVTMVESHAN+KIRSK +PKQLL +V+ L  +RLTVLHL+VTTV+ +VLY
Sbjct: 247 HKTQSTIADIEVTMVESHANLKIRSKRRPKQLLKVVSGLHSMRLTVLHLNVTTVDQIVLY 306

Query: 191 SLCVKVEDDCALNSGEEIATAVNQILARSQTEGKLS 84
           SL VKVEDDC L+S +EIATAV Q+L R Q E  L+
Sbjct: 307 SLSVKVEDDCKLSSVDEIATAVYQMLGRIQEESMLN 342


>ref|XP_002319028.1| predicted protein [Populus trichocarpa] gi|222857404|gb|EEE94951.1|
           predicted protein [Populus trichocarpa]
          Length = 189

 Score =  120 bits (300), Expect = 2e-25
 Identities = 63/94 (67%), Positives = 78/94 (82%)
 Frame = -2

Query: 365 SGAAMADIEVTMVESHANMKIRSKSKPKQLLILVNELQILRLTVLHLSVTTVNHVVLYSL 186
           S +A+ADIEVTMVESHAN+KIRSK +PKQLL +V+ L  +RLTVLHL+V+TV+ +VLYSL
Sbjct: 95  SQSAIADIEVTMVESHANLKIRSKRRPKQLLKVVSALHSMRLTVLHLNVSTVDQIVLYSL 154

Query: 185 CVKVEDDCALNSGEEIATAVNQILARSQTEGKLS 84
            VKVEDDC L+S +EIATAV Q+L R Q E  L+
Sbjct: 155 SVKVEDDCKLSSVDEIATAVYQMLGRIQEESMLN 188


>gb|ABK92747.1| unknown [Populus trichocarpa]
          Length = 97

 Score =  120 bits (300), Expect = 2e-25
 Identities = 63/94 (67%), Positives = 78/94 (82%)
 Frame = -2

Query: 365 SGAAMADIEVTMVESHANMKIRSKSKPKQLLILVNELQILRLTVLHLSVTTVNHVVLYSL 186
           S +A+ADIEVTMVESHAN+KIRSK +PKQLL +V+ L  +RLTVLHL+V+TV+ +VLYSL
Sbjct: 3   SQSAIADIEVTMVESHANLKIRSKRRPKQLLKVVSALHSMRLTVLHLNVSTVDQIVLYSL 62

Query: 185 CVKVEDDCALNSGEEIATAVNQILARSQTEGKLS 84
            VKVEDDC L+S +EIATAV Q+L R Q E  L+
Sbjct: 63  SVKVEDDCKLSSVDEIATAVYQMLGRIQEESMLN 96


>ref|XP_002328413.1| predicted protein [Populus trichocarpa] gi|222838128|gb|EEE76493.1|
           predicted protein [Populus trichocarpa]
          Length = 189

 Score =  119 bits (299), Expect = 2e-25
 Identities = 62/92 (67%), Positives = 75/92 (81%)
 Frame = -2

Query: 371 HSSGAAMADIEVTMVESHANMKIRSKSKPKQLLILVNELQILRLTVLHLSVTTVNHVVLY 192
           H + + +ADIEVTMVESHAN+KIRSK +PKQLL +V+ L  +RLTVLHL+VTTV+ +VLY
Sbjct: 93  HKTQSTIADIEVTMVESHANLKIRSKRRPKQLLKVVSGLHSMRLTVLHLNVTTVDQIVLY 152

Query: 191 SLCVKVEDDCALNSGEEIATAVNQILARSQTE 96
           SL VKVEDDC L S +EIATAV Q+L R Q E
Sbjct: 153 SLSVKVEDDCKLTSVDEIATAVYQMLGRIQEE 184


>ref|XP_002281083.2| PREDICTED: transcription factor bHLH96-like [Vitis vinifera]
           gi|296088296|emb|CBI36741.3| unnamed protein product
           [Vitis vinifera]
          Length = 323

 Score =  115 bits (289), Expect = 3e-24
 Identities = 59/92 (64%), Positives = 74/92 (80%)
 Frame = -2

Query: 359 AAMADIEVTMVESHANMKIRSKSKPKQLLILVNELQILRLTVLHLSVTTVNHVVLYSLCV 180
           A +ADIEVTMVESHAN+KIRS+ +PKQLL +V+ LQ L LT+LHL+VTT++  VLYSL V
Sbjct: 232 AVIADIEVTMVESHANLKIRSRRRPKQLLRMVSGLQSLHLTILHLNVTTIDQTVLYSLSV 291

Query: 179 KVEDDCALNSGEEIATAVNQILARSQTEGKLS 84
           KVEDDC L S ++IATAV Q+L R Q E  ++
Sbjct: 292 KVEDDCKLTSVDDIATAVYQMLGRIQEEAMIN 323


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