BLASTX nr result

ID: Bupleurum21_contig00028180 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00028180
         (1354 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI16818.3| unnamed protein product [Vitis vinifera]              276   7e-72
ref|XP_002282194.2| PREDICTED: uncharacterized protein LOC100245...   270   5e-70
ref|XP_002515056.1| Nucleoporin GLE1, putative [Ricinus communis...   245   2e-62
emb|CAN81849.1| hypothetical protein VITISV_036820 [Vitis vinifera]   245   2e-62
ref|XP_003537556.1| PREDICTED: uncharacterized protein LOC100802...   225   2e-56

>emb|CBI16818.3| unnamed protein product [Vitis vinifera]
          Length = 701

 Score =  276 bits (707), Expect = 7e-72
 Identities = 182/431 (42%), Positives = 239/431 (55%), Gaps = 27/431 (6%)
 Frame = +3

Query: 84   LQFVAMGRTVVLEVKCPKNVEGI-AIDPQPDWSFDSLLVEINSIENKLTVP-----PSRK 245
            +  +AMG  V LE++CP+N  GI A DP+PDWSF++L+ E+NS+E KL        P  K
Sbjct: 35   IALLAMG-AVKLELRCPQNENGIIAADPEPDWSFEALVSELNSLELKLNSSSIFPIPFTK 93

Query: 246  YLPR--KGFKQNP-AFIMRFSDEEMEHEECKAGSEDVNDQALVVGTRFTCXXXXXXXXXX 416
               R     K+ P AF+MR SD+EME  E + G E V D++LV G+RF C          
Sbjct: 94   TESRGLSNVKKGPTAFVMRVSDDEMEDVEREGGVEGVYDRSLVAGSRFACDELYLSDSDD 153

Query: 417  XXXVLHGEPYLMEKGGLVEGALMELTHEHHLVVMEEVRNQISSLEADLADRNEKFTSAIT 596
                LH + +LM+K G+ EGA  ELTHEH L V EEVR QIS LE DL    +K TSAI 
Sbjct: 154  ESN-LHDQFHLMDKAGVAEGAFFELTHEHQLAVKEEVRTQISVLETDLTHERKKSTSAIV 212

Query: 597  RVEKHRETRREMEKKLDLQYQRTVAEDLDKYLTGVQRRHEHRSQIEEKRI---XXXXXXX 767
            RVEK+ E RREM++KLD+QYQR +AE LD ++T VQR HEHRSQIEE+RI          
Sbjct: 213  RVEKYIEARREMDRKLDIQYQRNIAEALDNHMTAVQRDHEHRSQIEERRIRNEAAFEEAR 272

Query: 768  XXXXXXXXKLRQDKIKAEAEVQGXXXXXXXXXXXXXXXXXXSQRXXXXXXXXTVAENSKK 947
                    KLRQ+K KAEA+V+                    +R             S +
Sbjct: 273  KEKALQEEKLRQEKAKAEAKVRLELAAKKRAEEAKIAALEDERRAAKEAAEREGIGASTR 332

Query: 948  AAALAISQEAT------------AQAVRTGANEAKKAASAGNFLRGTENALNLEERRSQI 1091
            AA     +EAT            AQ   +  +  KKA SAGN L+  E+AL LE+ R Q 
Sbjct: 333  AATEVAPKEATGHQRDASLGILNAQLNGSKTDGTKKAQSAGNILKSAESALKLEQERLQK 392

Query: 1092 YKEVTTETESL--RNNTDLHSHEMQIARRIRQISGTMESVRAKAEELITLISRSTNPRS- 1262
            YKE   +T++L   +N D   HE Q ARRIRQISG+ E+VR K   LI + +    P+  
Sbjct: 393  YKEFDEKTQALGQSSNKDFQRHEQQFARRIRQISGSKENVRTKGNALIKMFNDPLCPQPI 452

Query: 1263 SILLFSEKIVA 1295
            ++ +F +K+V+
Sbjct: 453  NVAIFVKKVVS 463


>ref|XP_002282194.2| PREDICTED: uncharacterized protein LOC100245667 [Vitis vinifera]
          Length = 680

 Score =  270 bits (691), Expect = 5e-70
 Identities = 177/422 (41%), Positives = 233/422 (55%), Gaps = 27/422 (6%)
 Frame = +3

Query: 111  VVLEVKCPKNVEGI-AIDPQPDWSFDSLLVEINSIENKLTVP-----PSRKYLPR--KGF 266
            V LE++CP+N  GI A DP+PDWSF++L+ E+NS+E KL        P  K   R     
Sbjct: 26   VKLELRCPQNENGIIAADPEPDWSFEALVSELNSLELKLNSSSIFPIPFTKTESRGLSNV 85

Query: 267  KQNP-AFIMRFSDEEMEHEECKAGSEDVNDQALVVGTRFTCXXXXXXXXXXXXXVLHGEP 443
            K+ P AF+MR SD+EME  E + G E V D++LV G+RF C              LH + 
Sbjct: 86   KKGPTAFVMRVSDDEMEDVEREGGVEGVYDRSLVAGSRFACDELYLSDSDDESN-LHDQF 144

Query: 444  YLMEKGGLVEGALMELTHEHHLVVMEEVRNQISSLEADLADRNEKFTSAITRVEKHRETR 623
            +LM+K G+ EGA  ELTHEH L V EEVR QIS LE DL    +K TSAI RVEK+ E R
Sbjct: 145  HLMDKAGVAEGAFFELTHEHQLAVKEEVRTQISVLETDLTHERKKSTSAIVRVEKYIEAR 204

Query: 624  REMEKKLDLQYQRTVAEDLDKYLTGVQRRHEHRSQIEEKRI---XXXXXXXXXXXXXXXK 794
            REM++KLD+QYQR +AE LD ++T VQR HEHRSQIEE+RI                  K
Sbjct: 205  REMDRKLDIQYQRNIAEALDNHMTAVQRDHEHRSQIEERRIRNEAAFEEARKEKALQEEK 264

Query: 795  LRQDKIKAEAEVQGXXXXXXXXXXXXXXXXXXSQRXXXXXXXXTVAENSKKAAALAISQE 974
            LRQ+K KAEA++                    ++              S +AA     +E
Sbjct: 265  LRQEKAKAEAKLAAKKRAEEAKIAALEDERRAAKEAAEREGIGA----STRAATEVAPKE 320

Query: 975  AT------------AQAVRTGANEAKKAASAGNFLRGTENALNLEERRSQIYKEVTTETE 1118
            AT            AQ   +  +  KKA SAGN L+  E+AL LE+ R Q YKE   +T+
Sbjct: 321  ATGHQRDASLGILNAQLNGSKTDGTKKAQSAGNILKSAESALKLEQERLQKYKEFDEKTQ 380

Query: 1119 SL--RNNTDLHSHEMQIARRIRQISGTMESVRAKAEELITLISRSTNPRS-SILLFSEKI 1289
            +L   +N D   HE Q ARRIRQISG+ E+VR K   LI + +    P+  ++ +F +K+
Sbjct: 381  ALGQSSNKDFQRHEQQFARRIRQISGSKENVRTKGNALIKMFNDPLCPQPINVAIFVKKV 440

Query: 1290 VA 1295
            V+
Sbjct: 441  VS 442


>ref|XP_002515056.1| Nucleoporin GLE1, putative [Ricinus communis]
            gi|223546107|gb|EEF47610.1| Nucleoporin GLE1, putative
            [Ricinus communis]
          Length = 613

 Score =  245 bits (626), Expect = 2e-62
 Identities = 153/418 (36%), Positives = 220/418 (52%), Gaps = 24/418 (5%)
 Frame = +3

Query: 117  LEVKCPKNVEGIAIDPQPDWSFDSLLVEINSIENKLTVPPSRKYLPRKGFKQNPAFIMRF 296
            LE++CP+ V  + +DP PDWSFDSLL E++S+ENKL    S  +      +   AF+MR 
Sbjct: 8    LELRCPQRVNEVGVDPNPDWSFDSLLSELSSLENKLNNSSSAPFTKTLSRRSRRAFVMRV 67

Query: 297  SDEEMEHEECKAGSEDVNDQALVVGTRFTCXXXXXXXXXXXXXV--LHGEPYLMEKGGLV 470
            SD+E+E  + +   E  + Q+LVV  RF                  L    YLMEK GLV
Sbjct: 68   SDDEVEDNDSEGDDEKDHTQSLVVAKRFNYDDIHLCDSDDSDYENDLDSYSYLMEKVGLV 127

Query: 471  EGALMELTHEHHLVVMEEVRNQISSLEADLADRNEKFTSAITRVEKHRETRREMEKKLDL 650
            E +L EL+ EH L V EE+RNQIS+LE +L   +EK  SA  RVEK+RE R+E ++K D 
Sbjct: 128  ESSLFELSQEHQLGVKEEIRNQISALEMELMRESEKSNSAFNRVEKYREARKESDRKFDT 187

Query: 651  QYQRTVAEDLDKYLTGVQRRHEHRSQIEEKRI----XXXXXXXXXXXXXXXKLRQDKIKA 818
            QYQR +AE LD +LT +QR HE +SQIEE++I                   +LRQ++ +A
Sbjct: 188  QYQRKIAEALDNHLTSIQRDHELKSQIEERKIRSDAAHEEARRKEKALQEERLRQERARA 247

Query: 819  EAEVQGXXXXXXXXXXXXXXXXXXSQRXXXXXXXXTVAENSKKAAALAISQEATAQAVRT 998
            EAE +                    ++          AE SKK AA    ++     V  
Sbjct: 248  EAEAK------RKAEEAKMAALEAERKAAKEAAEKEAAEASKKQAATVSGEDVAGNRVHA 301

Query: 999  G------------ANEAKKAASAGNFLRGTENALNLEERRSQIYKEVTTETESLR--NNT 1136
                         +N   K+  AG+ +R  E+AL+LE++R +  + +  +  SL+  +N 
Sbjct: 302  SSANWDVNSQGAVSNGTNKSQLAGSIIRAAESALSLEQKRLEKLRALEEQNRSLKLSSNM 361

Query: 1137 DLHSHEMQIARRIRQISGTMESVRAKAEELITLISRSTNPRS----SILLFSEKIVAQ 1298
            D  SHE  +AR I+QI GT E+VRAK+ EL+ L    + P+S    +I  F +K+ +Q
Sbjct: 362  DFSSHERHVARLIKQIRGTKENVRAKSSELVKLCQNPSCPQSISIAAIATFPKKVASQ 419


>emb|CAN81849.1| hypothetical protein VITISV_036820 [Vitis vinifera]
          Length = 745

 Score =  245 bits (626), Expect = 2e-62
 Identities = 173/444 (38%), Positives = 235/444 (52%), Gaps = 40/444 (9%)
 Frame = +3

Query: 84   LQFVAMGRTVVLEVKCPKNVEGI-AIDPQPDWSFDSLLVEINSIENKLTVP-----PSRK 245
            +  +AMG  V LE++CP+N  GI A DP+PDWSF++L+ E+NS+E KL        P  K
Sbjct: 65   IALLAMG-AVKLELRCPQNENGIIAADPEPDWSFEALVSELNSLELKLNSSSIFPIPFTK 123

Query: 246  YLPR--KGFKQNP-AFIMRFSDEEMEHEECKAGSEDVNDQALVVGTRFTCXXXXXXXXXX 416
               R     K+ P AF+MR SD+EME  E + G E+V D++LV G+RF C          
Sbjct: 124  TESRGLSNVKKGPTAFVMRVSDDEMEDVEREGGVEEVYDRSLVAGSRFACDELYLRFCKW 183

Query: 417  XXXV------LHGEPYLMEKGGLVEGALMELTHEHHLVV-------MEEVRNQISSLEAD 557
                      LH + +LM+K G+ EG       +  + +       +EEVR QIS LE D
Sbjct: 184  PFSDSDDESNLHDQFHLMDKAGVAEGIRDVGMADDPISISIFDGNYLEEVRTQISVLETD 243

Query: 558  LADRNEKFTSAITRVEKHRETRREMEKKLDLQYQRTVAEDLDKYLTGVQRRHEHRSQIEE 737
            L    +K TSAI RVEK+ E RREM++KLD+QYQR +AE LD ++T VQR HEHRSQIEE
Sbjct: 244  LTHERKKSTSAIVRVEKYIEARREMDRKLDIQYQRNIAEALDNHMTAVQRDHEHRSQIEE 303

Query: 738  KRI---XXXXXXXXXXXXXXXKLRQDKIKAEAEVQGXXXXXXXXXXXXXXXXXXSQRXXX 908
            +RI                  KLRQ+K KAEA+V+                    +R   
Sbjct: 304  RRIRNEAAFEEARKEKALQEEKLRQEKAKAEAKVRLELAAKKRAEEAKITALEDERRAAK 363

Query: 909  XXXXXTVAENSKKAAALAISQEAT------------AQAVRTGANEAKKAASAGNFLRGT 1052
                      S +AA     +EAT            AQ   +  +  KKA SAGN L+  
Sbjct: 364  EAAEREGIGASTRAATEVAPKEATGHQRDASLGILNAQLNGSKTDGTKKAQSAGNILKSA 423

Query: 1053 ENALNLEERRSQIYKEVTTETESL--RNNTDLHSHEMQIARRIRQISGTMESVRAKAEEL 1226
            E+AL LE+ R Q YKE   +T++L   +N D   HE Q ARRIRQISG+ E+VR K   L
Sbjct: 424  ESALKLEQERLQKYKEFDEKTQALGQSSNKDFQRHEQQFARRIRQISGSKENVRTKGNGL 483

Query: 1227 ITLISRSTNPRS-SILLFSEKIVA 1295
            I + +    P+  ++ +F +K+V+
Sbjct: 484  IKMFNDPLCPQPINVAIFVKKVVS 507


>ref|XP_003537556.1| PREDICTED: uncharacterized protein LOC100802744 [Glycine max]
          Length = 629

 Score =  225 bits (573), Expect = 2e-56
 Identities = 160/448 (35%), Positives = 231/448 (51%), Gaps = 30/448 (6%)
 Frame = +3

Query: 99   MGRTVVLEVKCP-KNVEGIAIDPQPDWSFDSLLVEINSIENKLTV---------PPSRKY 248
            M   V L ++C  + V+G+A +P+PDW+FD L+ E+N++E KL            P  K 
Sbjct: 1    MRGAVKLNLRCSSQRVDGVAAEPEPDWTFDDLVSELNALETKLATNASSSTQRSSPLDKS 60

Query: 249  LPRKG--FKQNPAFIMRFSDEEMEHEECKAGSEDVNDQALVV---GTRFTCXXXXXXXXX 413
            + + G   ++  AF++R  + +ME  E  +  +D  D+ALVV   G RFTC         
Sbjct: 61   ISKCGKEIQRGRAFVLRADEFDMEDSE--SDDDDHVDRALVVTDSGKRFTCDELYLSDDD 118

Query: 414  XXXXV-LHGEPYLMEKGGLVEGALMELTHEHHLVVMEEVRNQISSLEADLADRNEKFTSA 590
                      PYLM++ G VEGAL+ELTHEH L V +E+RN+IS+LE  L +  +  TS+
Sbjct: 119  SDIASGFEVRPYLMDELGEVEGALLELTHEHQLRVKDEIRNKISALETALVNETQNSTSS 178

Query: 591  ITRVEKHRETRREMEKKLDLQYQRTVAEDLDKYLTGVQRRHEHRSQIEEKRI-XXXXXXX 767
              RVEK++ETR +++KK D QYQR +AE LD +LT VQR  E RSQIEE++I        
Sbjct: 179  FLRVEKYKETRLDLDKKFDTQYQRRIAEALDNHLTAVQRDRELRSQIEERKIRSDAAYEE 238

Query: 768  XXXXXXXXKLRQDKIKAEAEVQGXXXXXXXXXXXXXXXXXXSQRXXXXXXXXTV------ 929
                    K +Q+K KAEAE +                    Q          V      
Sbjct: 239  AKRKVAFEKQQQEKAKAEAEAKLRAEEAKREAESKAAMEAKKQAAIEAEKSAAVEAERRA 298

Query: 930  ---AENSKKAAALAISQEATAQAVRTGANEAK-KAASAGNFLRGTENALNLEERRSQIYK 1097
               A  + K      +Q+ATA    T ++ +  +   +GN  R   NALNLE+ R Q  K
Sbjct: 299  EKEATETSKRVTSGGTQQATAHPTGTASSLSNAETKESGNLYRAAANALNLEQWRLQKLK 358

Query: 1098 EVTTETESLRN--NTDLHSHEMQIARRIRQISGTMESVRAKAEELITLISRSTNPRS-SI 1268
            E+    + +R+  N D   HE +I+R IRQI G  ++VR+KA EL  L+S   + +S SI
Sbjct: 359  ELCEGNQMIRSSYNEDCTRHEGRISRNIRQIRGISDNVRSKASELTKLLSHPQSFQSISI 418

Query: 1269 LLFSEKIVAQCVNSSGSFSKSVYAYAQV 1352
             +F++K+VA C N +     S Y    V
Sbjct: 419  EIFAKKVVAYCANPANVPFASAYVIVLV 446


Top