BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00028163
         (1137 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAC95175.1| putative non-LTR retroelement reverse transcripta...   340   3e-91
gb|AAF98181.1|AC000107_4 F17F8.5 [Arabidopsis thaliana]               338   2e-90
dbj|BAB09379.1| non-LTR retroelement reverse transcriptase-like ...   325   1e-86
gb|AAF87143.1|AC002423_8 T23E23.16 [Arabidopsis thaliana]             323   5e-86
gb|AAC63678.1| putative non-LTR retroelement reverse transcripta...   323   5e-86

>gb|AAC95175.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1352

 Score =  340 bits (873), Expect = 3e-91
 Identities = 168/375 (44%), Positives = 237/375 (63%)
 Frame = -3

Query: 1135 SNISQFRPISCCSVLYKCISRILANRLKLLASSVVSHNQSAFIPGRLIGDNVSLAQAICK 956
            S +  +RPISCC+VLYK +S+++ANRLK +  + ++ NQSAFI  RL+ +N+ LA  + K
Sbjct: 671  SGMKDYRPISCCNVLYKIVSKLMANRLKEILPASIAPNQSAFIKDRLMMENLLLASELVK 730

Query: 955  DYHLQRGPARGMLKLDIHKAFDTVNWEFLFEVLEKLNLPGILISWVKKCITTAMFSVKVN 776
            DYH +   +R  LK+DI KAFD V W FL  VL+ ++LP + I W++ CI TA FSV+VN
Sbjct: 731  DYHKESISSRSALKIDISKAFDFVQWPFLINVLKAIHLPEMFIHWIELCIGTASFSVQVN 790

Query: 775  GSLEGYFEGKAGLRQGDPMSPYLFVIVMEVFSCLARKMLVPADFSFHLNTERLKLTHLCF 596
            G L G+F  + GLRQG  +SPYL+VI M V SC+  K  V    S+H     + LTHLCF
Sbjct: 791  GELSGFFRSERGLRQGCSLSPYLYVICMNVLSCMLDKAAVEKKISYHPRCRNMNLTHLCF 850

Query: 595  ADDLLIFTKGEVNSAMKIKELIDLFSAISGLHINATKSRWFLCNVDSVTTQAILDLSGYE 416
            ADD+++F+ G   S      + + F+A+S L I+  KS  F+  +      +IL    +E
Sbjct: 851  ADDIMVFSDGTSKSIQGTLAIFEKFAAMSWLKISLEKSTIFMAGISPNAKTSILQQFPFE 910

Query: 415  LGRLPISYLGLPLITGRLNASHCQPLVKKLCSRVLSWTTNYLSQAGRLQLVRSILMGIVG 236
            LG LP+ YLGLPL+T R+  S   PLV+K+ +R+ SWT  +LS AGRLQL++S+L  I  
Sbjct: 911  LGTLPVKYLGLPLLTKRMTQSDYLPLVEKIRARITSWTNRFLSFAGRLQLIKSVLSSITN 970

Query: 235  YWTMYLFLPVCVLKQIQSVLSNFLWGGKPSGKVLHKVAWDACCTPKAEGGLGLKNLRDLN 56
            +W     LP   L++I+ + S FLW G        K+AW   C  K EGGLGLK L++ N
Sbjct: 971  FWLSVFRLPKACLQEIEKMFSAFLWSGPDLNTKKAKIAWSEVCKLKEEGGLGLKPLKEAN 1030

Query: 55   DASILWQLWRIVTNR 11
            + S+L  +WRI++ R
Sbjct: 1031 EVSLLKLIWRILSAR 1045


>gb|AAF98181.1|AC000107_4 F17F8.5 [Arabidopsis thaliana]
          Length = 872

 Score =  338 bits (866), Expect = 2e-90
 Identities = 169/369 (45%), Positives = 232/369 (62%)
 Frame = -3

Query: 1120 FRPISCCSVLYKCISRILANRLKLLASSVVSHNQSAFIPGRLIGDNVSLAQAICKDYHLQ 941
            +RPISCC+VLYK IS+I+ANRLKLL    ++ NQSAF+  RL+ +N+ LA  + KDYH  
Sbjct: 176  YRPISCCNVLYKVISKIIANRLKLLLPRFIAENQSAFVKDRLLIENLLLATELVKDYHKD 235

Query: 940  RGPARGMLKLDIHKAFDTVNWEFLFEVLEKLNLPGILISWVKKCITTAMFSVKVNGSLEG 761
               AR  +K+DI KAFD+V W FL   L  +N     I W+  CITTA FSV+VNG L G
Sbjct: 236  SISARCAIKIDISKAFDSVQWSFLTNTLVAMNFSPTFIHWINLCITTASFSVQVNGDLVG 295

Query: 760  YFEGKAGLRQGDPMSPYLFVIVMEVFSCLARKMLVPADFSFHLNTERLKLTHLCFADDLL 581
            YF+ K GLRQG  +SPYLFVI M+V S +  K      F FH   +RL LTHL FADDL+
Sbjct: 296  YFQSKRGLRQGCSLSPYLFVICMDVLSKMLDKAAGVRKFGFHPKCQRLGLTHLSFADDLM 355

Query: 580  IFTKGEVNSAMKIKELIDLFSAISGLHINATKSRWFLCNVDSVTTQAILDLSGYELGRLP 401
            + + G+  S   I E+ D F   SGL I+  KS  ++  V  +  Q I     +++G+LP
Sbjct: 356  VLSDGKTRSIEGILEVFDEFCKRSGLRISLEKSTLYMAGVSPIIKQEIAAKFLFDVGQLP 415

Query: 400  ISYLGLPLITGRLNASHCQPLVKKLCSRVLSWTTNYLSQAGRLQLVRSILMGIVGYWTMY 221
            + YLGLPL+T RL ++   PL++++  R+ +WT  + S AGR  L++S+L  I  +W   
Sbjct: 416  VRYLGLPLVTKRLTSADYSPLLEQIKKRIATWTFRFFSFAGRFNLIKSVLWSICNFWLAA 475

Query: 220  LFLPVCVLKQIQSVLSNFLWGGKPSGKVLHKVAWDACCTPKAEGGLGLKNLRDLNDASIL 41
              LP   +++I  + S+FLW G        K++WD  C PKAEGGLGL+NL++ ND S L
Sbjct: 476  FRLPRQCIREIDKLCSSFLWSGSEMSSHKAKISWDIVCKPKAEGGLGLRNLKEANDVSCL 535

Query: 40   WQLWRIVTN 14
              +WRI++N
Sbjct: 536  KLVWRIISN 544


>dbj|BAB09379.1| non-LTR retroelement reverse transcriptase-like protein [Arabidopsis
            thaliana]
          Length = 1223

 Score =  325 bits (834), Expect = 1e-86
 Identities = 161/372 (43%), Positives = 231/372 (62%)
 Frame = -3

Query: 1129 ISQFRPISCCSVLYKCISRILANRLKLLASSVVSHNQSAFIPGRLIGDNVSLAQAICKDY 950
            +  +RPISCC+VLYK IS+I+ANRLKL+    ++ NQSAF+  RL+ +N+ LA  + KDY
Sbjct: 526  MKDYRPISCCNVLYKVISKIIANRLKLVLPKFIAGNQSAFVKDRLLIENLLLATELVKDY 585

Query: 949  HLQRGPARGMLKLDIHKAFDTVNWEFLFEVLEKLNLPGILISWVKKCITTAMFSVKVNGS 770
            H      R  +K+DI KAFD+V W FL  V   L  P   I W+  CITTA FSV+VNG 
Sbjct: 586  HKDTISTRCAIKIDISKAFDSVQWPFLINVFTILGFPREFIHWINICITTASFSVQVNGE 645

Query: 769  LEGYFEGKAGLRQGDPMSPYLFVIVMEVFSCLARKMLVPADFSFHLNTERLKLTHLCFAD 590
            L GYF+   GLRQG  +SPYLFVI M+V S +  K      F +H   + + LTHL FAD
Sbjct: 646  LAGYFQSSRGLRQGCALSPYLFVICMDVLSKMLDKAAAARHFGYHPKCKTMGLTHLSFAD 705

Query: 589  DLLIFTKGEVNSAMKIKELIDLFSAISGLHINATKSRWFLCNVDSVTTQAILDLSGYELG 410
            DL++ + G++ S  +I ++ D F+  SGL I+  KS  +L  + +     + D   +  G
Sbjct: 706  DLMVLSDGKIRSIERIIKVFDEFAKWSGLRISLEKSTVYLAGLSATARNEVADRFPFSSG 765

Query: 409  RLPISYLGLPLITGRLNASHCQPLVKKLCSRVLSWTTNYLSQAGRLQLVRSILMGIVGYW 230
            +LP+ YLGLPLIT RL+ + C PL++++  R+ SWT+ +LS AGRL L+ S+L  I  +W
Sbjct: 766  QLPVRYLGLPLITKRLSTTDCLPLLEQVRKRIGSWTSRFLSYAGRLNLISSVLWSICNFW 825

Query: 229  TMYLFLPVCVLKQIQSVLSNFLWGGKPSGKVLHKVAWDACCTPKAEGGLGLKNLRDLNDA 50
                 LP   +++++ + S FLW G        K++W   C PK EGGLGL++L++ ND 
Sbjct: 826  LAAFRLPRKCIRELEKMCSAFLWSGTEMNSNKAKISWHMVCKPKDEGGLGLRSLKEANDV 885

Query: 49   SILWQLWRIVTN 14
              L  +W+IV++
Sbjct: 886  CCLKLVWKIVSH 897


>gb|AAF87143.1|AC002423_8 T23E23.16 [Arabidopsis thaliana]
          Length = 653

 Score =  323 bits (828), Expect = 5e-86
 Identities = 161/376 (42%), Positives = 239/376 (63%)
 Frame = -3

Query: 1129 ISQFRPISCCSVLYKCISRILANRLKLLASSVVSHNQSAFIPGRLIGDNVSLAQAICKDY 950
            IS +RP+SCC+V+YK IS+I+ANRLK++    ++ NQ+AF+  RL+ +N+ LA  + KDY
Sbjct: 53   ISHYRPLSCCNVIYKIISKIIANRLKMVLPKFIAGNQTAFVKDRLLIENLLLATELVKDY 112

Query: 949  HLQRGPARGMLKLDIHKAFDTVNWEFLFEVLEKLNLPGILISWVKKCITTAMFSVKVNGS 770
            H +   +R  +K+DI KAF++V W F+  +L  ++ P   + W+  CI+TA FSV+VNG 
Sbjct: 113  HKESVSSRCAIKIDISKAFNSVQWSFIRNILLSMDFPMEFVHWIMLCISTASFSVQVNGE 172

Query: 769  LEGYFEGKAGLRQGDPMSPYLFVIVMEVFSCLARKMLVPADFSFHLNTERLKLTHLCFAD 590
            L G+F+ K GLRQG  +SPYLFV+ M+V S L  +      F +H   + L LTHL FAD
Sbjct: 173  LVGFFQSKRGLRQGCSLSPYLFVMSMDVLSKLLDQAASAKKFGYHSRCKELSLTHLSFAD 232

Query: 589  DLLIFTKGEVNSAMKIKELIDLFSAISGLHINATKSRWFLCNVDSVTTQAILDLSGYELG 410
            DL++ + G+V S   I E+ D+F+  SGL I+  KS  +L  V       I +   +++G
Sbjct: 233  DLMVLSDGKVRSIDGIVEVFDIFAKFSGLKISMEKSTIYLAGVTEDVYHEIQNRYQFDVG 292

Query: 409  RLPISYLGLPLITGRLNASHCQPLVKKLCSRVLSWTTNYLSQAGRLQLVRSILMGIVGYW 230
            +LP+ YLGLPL+T RL A+   PL++ +  ++ +WTT YLS AGRL L+ S+L  I  +W
Sbjct: 293  QLPVRYLGLPLVTKRLTATDYSPLLEHIKKKIGTWTTRYLSYAGRLNLITSVLWSICNFW 352

Query: 229  TMYLFLPVCVLKQIQSVLSNFLWGGKPSGKVLHKVAWDACCTPKAEGGLGLKNLRDLNDA 50
                 LP   +++I  + S FLW G        +V W   C PK EGGLGL++L+++N+ 
Sbjct: 353  LAAFRLPRECIREIDKICSAFLWSGPDLNPRKTRVCWGDVCKPKQEGGLGLRSLKEMNEV 412

Query: 49   SILWQLWRIVTNRTNS 2
            S L  +WRIV++ TNS
Sbjct: 413  SCLKLIWRIVSH-TNS 427


>gb|AAC63678.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1216

 Score =  323 bits (828), Expect = 5e-86
 Identities = 165/371 (44%), Positives = 226/371 (60%)
 Frame = -3

Query: 1129 ISQFRPISCCSVLYKCISRILANRLKLLASSVVSHNQSAFIPGRLIGDNVSLAQAICKDY 950
            I  +RPISCC+VLYK IS+ILANRLK +    +  NQSAF+  RL+ +NV LA  + KDY
Sbjct: 247  IKDYRPISCCNVLYKAISKILANRLKRILPKFIVGNQSAFVKDRLLIENVLLATELVKDY 306

Query: 949  HLQRGPARGMLKLDIHKAFDTVNWEFLFEVLEKLNLPGILISWVKKCITTAMFSVKVNGS 770
            H      R  +K+DI KAFD++ W FL  VL  +N PG  I W+  C++TA FS++VNG 
Sbjct: 307  HKDSISTRCAMKIDISKAFDSLQWSFLTHVLAAMNFPGEFIHWISLCMSTASFSIQVNGE 366

Query: 769  LEGYFEGKAGLRQGDPMSPYLFVIVMEVFSCLARKMLVPADFSFHLNTERLKLTHLCFAD 590
            L GYF    GLRQG  +SPYLFVI M+V S +  K     +F +H   + L LTHLCFAD
Sbjct: 367  LAGYFRSARGLRQGCSLSPYLFVISMDVLSRMLDKAAGAREFGYHPRCKTLGLTHLCFAD 426

Query: 589  DLLIFTKGEVNSAMKIKELIDLFSAISGLHINATKSRWFLCNVDSVTTQAILDLSGYELG 410
            DL+I T G++ S   I ++++ F+A  GL I   K+  +L  V   + Q +     + +G
Sbjct: 427  DLMILTDGKIRSVDGIVKVLNQFAAKLGLKICMEKTTLYLAGVSDHSRQLMSSRYSFGVG 486

Query: 409  RLPISYLGLPLITGRLNASHCQPLVKKLCSRVLSWTTNYLSQAGRLQLVRSILMGIVGYW 230
            +LP+ YLGLPL+T RL  S   PL+ ++  R+  WT+ YLS AGRL L+ S+L  I  +W
Sbjct: 487  KLPVRYLGLPLVTKRLTTSDYSPLIDQIRRRIGMWTSRYLSFAGRLSLINSVLWSITNFW 546

Query: 229  TMYLFLPVCVLKQIQSVLSNFLWGGKPSGKVLHKVAWDACCTPKAEGGLGLKNLRDLNDA 50
                 LP   + +I  + S  LW G        KV+WD  C PK EGGLGL++LR+ N  
Sbjct: 547  MNAFRLPRECINEINRISSALLWSGPELNPKKAKVSWDEICKPKKEGGLGLQSLREANKV 606

Query: 49   SILWQLWRIVT 17
            S L  +WR+++
Sbjct: 607  SSLKLIWRLLS 617