BLASTX nr result

ID: Bupleurum21_contig00028154 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00028154
         (950 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI37702.3| unnamed protein product [Vitis vinifera]              240   4e-61
ref|XP_002280150.1| PREDICTED: chloride channel protein CLC-e [V...   240   4e-61
ref|XP_004154579.1| PREDICTED: LOW QUALITY PROTEIN: chloride cha...   227   3e-57
ref|XP_004140064.1| PREDICTED: chloride channel protein CLC-e-li...   226   5e-57
gb|ADD09862.1| chloride channel E [Eutrema halophilum]                216   8e-54

>emb|CBI37702.3| unnamed protein product [Vitis vinifera]
          Length = 653

 Score =  240 bits (612), Expect = 4e-61
 Identities = 121/191 (63%), Positives = 144/191 (75%), Gaps = 1/191 (0%)
 Frame = -3

Query: 570 IISACFVGLLTGISVVVFNNVVHEIRDLCWDGIPYRGASWLREEPTEVVWKQIVLVPTCG 391
           I+S+CFVGLLTGI +V+FNN VH IRD  WDGIPYRGASWLREEP E +W++++LVP CG
Sbjct: 9   ILSSCFVGLLTGIGIVLFNNAVHVIRDFSWDGIPYRGASWLREEPIEAIWERVILVPLCG 68

Query: 390 GLVVSMLNYIRGAFEVPVEG-VSSSISDVLKPILRAVAACVTLGTGNSLGPEGPSVDIGS 214
           GL+VS LN +R A + P +G + S+I   L+P L+AVAACVTLGTGNSLGPEGPSV+IG+
Sbjct: 69  GLLVSGLNVLRDALQSPGDGNLISNIKAALQPFLKAVAACVTLGTGNSLGPEGPSVEIGA 128

Query: 213 SIAKGVGKLFDKGTQSKLXXXXXXXXXXXXXXXXXXXAGCFFAIESVLWSSPAQSSLSLP 34
           SIAKGV  LFDK ++ K+                   AGCFFA+ESVLW S A SSLSL 
Sbjct: 129 SIAKGVSSLFDKSSKRKVSLVAAGSAAGISSGFNAAFAGCFFAVESVLWPSTADSSLSLQ 188

Query: 33  NTTSMVILSAV 1
           NTTSMVILSAV
Sbjct: 189 NTTSMVILSAV 199


>ref|XP_002280150.1| PREDICTED: chloride channel protein CLC-e [Vitis vinifera]
           gi|301318140|gb|ADK66985.1| chloride channel ClC7 [Vitis
           vinifera]
          Length = 733

 Score =  240 bits (612), Expect = 4e-61
 Identities = 121/191 (63%), Positives = 144/191 (75%), Gaps = 1/191 (0%)
 Frame = -3

Query: 570 IISACFVGLLTGISVVVFNNVVHEIRDLCWDGIPYRGASWLREEPTEVVWKQIVLVPTCG 391
           I+S+CFVGLLTGI +V+FNN VH IRD  WDGIPYRGASWLREEP E +W++++LVP CG
Sbjct: 89  ILSSCFVGLLTGIGIVLFNNAVHVIRDFSWDGIPYRGASWLREEPIEAIWERVILVPLCG 148

Query: 390 GLVVSMLNYIRGAFEVPVEG-VSSSISDVLKPILRAVAACVTLGTGNSLGPEGPSVDIGS 214
           GL+VS LN +R A + P +G + S+I   L+P L+AVAACVTLGTGNSLGPEGPSV+IG+
Sbjct: 149 GLLVSGLNVLRDALQSPGDGNLISNIKAALQPFLKAVAACVTLGTGNSLGPEGPSVEIGA 208

Query: 213 SIAKGVGKLFDKGTQSKLXXXXXXXXXXXXXXXXXXXAGCFFAIESVLWSSPAQSSLSLP 34
           SIAKGV  LFDK ++ K+                   AGCFFA+ESVLW S A SSLSL 
Sbjct: 209 SIAKGVSSLFDKSSKRKVSLVAAGSAAGISSGFNAAFAGCFFAVESVLWPSTADSSLSLQ 268

Query: 33  NTTSMVILSAV 1
           NTTSMVILSAV
Sbjct: 269 NTTSMVILSAV 279


>ref|XP_004154579.1| PREDICTED: LOW QUALITY PROTEIN: chloride channel protein CLC-e-like
           [Cucumis sativus]
          Length = 779

 Score =  227 bits (579), Expect = 3e-57
 Identities = 122/210 (58%), Positives = 145/210 (69%), Gaps = 15/210 (7%)
 Frame = -3

Query: 585 TNTATIISACFVGLLTGISVVVFNNVVHEIRDLCWDGIPYRGASWLREEPTEVVWKQIVL 406
           T ++TIIS+CFVGLLTGI VV+FNN VHEIRD  WDGIP RGASWLRE P E +WK+++L
Sbjct: 124 TGSSTIISSCFVGLLTGIGVVLFNNAVHEIRDFSWDGIPNRGASWLREMPIEDIWKRVIL 183

Query: 405 VPTCGGLVVSMLNYIRGAFEVPVE-----------GVSSSISDVLK----PILRAVAACV 271
           VP  GG +VS LN +R A +V V+           GV  SIS+ LK    P L+A+AA V
Sbjct: 184 VPASGGFLVSFLNLLRDATDVKVDQPQGDDPSTKFGVPISISNKLKAALQPFLKAIAASV 243

Query: 270 TLGTGNSLGPEGPSVDIGSSIAKGVGKLFDKGTQSKLXXXXXXXXXXXXXXXXXXXAGCF 91
           TLGTGNSLGPEGPSVDIG+S+ KG+  +F+  +++KL                   AGCF
Sbjct: 244 TLGTGNSLGPEGPSVDIGTSVGKGISTVFEMNSRTKLSLIAAGSAAGISSGFNAAVAGCF 303

Query: 90  FAIESVLWSSPAQSSLSLPNTTSMVILSAV 1
           FAIESVLW SPA S LSL NTTSMVILSAV
Sbjct: 304 FAIESVLWPSPADSXLSLTNTTSMVILSAV 333


>ref|XP_004140064.1| PREDICTED: chloride channel protein CLC-e-like [Cucumis sativus]
          Length = 791

 Score =  226 bits (577), Expect = 5e-57
 Identities = 121/210 (57%), Positives = 145/210 (69%), Gaps = 15/210 (7%)
 Frame = -3

Query: 585 TNTATIISACFVGLLTGISVVVFNNVVHEIRDLCWDGIPYRGASWLREEPTEVVWKQIVL 406
           T ++TIIS+CFVGLLTGI VV+FNN VHEIRD  WDGIP RGASWLRE P E +WK+++L
Sbjct: 136 TGSSTIISSCFVGLLTGIGVVLFNNAVHEIRDFSWDGIPNRGASWLREMPIEDIWKRVIL 195

Query: 405 VPTCGGLVVSMLNYIRGAFEVPVE-----------GVSSSISDVLK----PILRAVAACV 271
           VP  GG +VS LN +R A +V V+           GV  SIS+ LK    P L+A+AA V
Sbjct: 196 VPASGGFLVSFLNLLRDATDVKVDQPQGDDPSTKFGVPISISNKLKAALQPFLKAIAASV 255

Query: 270 TLGTGNSLGPEGPSVDIGSSIAKGVGKLFDKGTQSKLXXXXXXXXXXXXXXXXXXXAGCF 91
           TLGTGNSLGPEGPSVDIG+S+ KG+  +F+  +++KL                   AGCF
Sbjct: 256 TLGTGNSLGPEGPSVDIGTSVGKGISTVFEMNSRTKLSLIAAGSAAGISSGFNAAVAGCF 315

Query: 90  FAIESVLWSSPAQSSLSLPNTTSMVILSAV 1
           FAIESVLW SPA S+ SL NTTSMVILSAV
Sbjct: 316 FAIESVLWPSPADSTFSLTNTTSMVILSAV 345


>gb|ADD09862.1| chloride channel E [Eutrema halophilum]
          Length = 711

 Score =  216 bits (549), Expect = 8e-54
 Identities = 117/201 (58%), Positives = 140/201 (69%), Gaps = 11/201 (5%)
 Frame = -3

Query: 570 IISACFVGLLTGISVVVFNNVVHEIRDLCWDGIPYRGASWLREEPTEVVWKQIVLVPTCG 391
           I SAC VG+LTGISVV+FNN VH +RD  WDGIP RGASWLREEP   +W +++LVPT G
Sbjct: 84  IASACLVGVLTGISVVLFNNCVHLLRDFAWDGIPDRGASWLREEPIGSIWLRVILVPTIG 143

Query: 390 GLVVSMLNYIRGAFEVPVEGVSSSISD-----------VLKPILRAVAACVTLGTGNSLG 244
           GL+VS+LN +R A      G S++ SD           VL+P L+AVAACVTLGTGNSLG
Sbjct: 144 GLLVSILNQLREA-----AGDSAADSDTADSNLNRLKAVLRPFLKAVAACVTLGTGNSLG 198

Query: 243 PEGPSVDIGSSIAKGVGKLFDKGTQSKLXXXXXXXXXXXXXXXXXXXAGCFFAIESVLWS 64
           PEGPSV+IG+SIAKGV  +F+K  Q+ L                   AGCFFA+ESVLW 
Sbjct: 199 PEGPSVEIGASIAKGVNSVFNKSPQTGLSLLAAGSASGISSGFNAAVAGCFFAVESVLWP 258

Query: 63  SPAQSSLSLPNTTSMVILSAV 1
           S + SS+SLPNTTS+VILSAV
Sbjct: 259 SSSDSSISLPNTTSIVILSAV 279


Top