BLASTX nr result

ID: Bupleurum21_contig00028145 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00028145
         (459 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002310818.1| predicted protein [Populus trichocarpa] gi|2...    64   2e-08
emb|CBI17482.3| unnamed protein product [Vitis vinifera]               58   9e-07
ref|XP_002263902.1| PREDICTED: dolichyldiphosphatase 1 [Vitis vi...    58   9e-07
ref|XP_002521546.1| conserved hypothetical protein [Ricinus comm...    56   3e-06

>ref|XP_002310818.1| predicted protein [Populus trichocarpa] gi|222853721|gb|EEE91268.1|
           predicted protein [Populus trichocarpa]
          Length = 227

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 33/65 (50%), Positives = 44/65 (67%), Gaps = 3/65 (4%)
 Frame = -3

Query: 187 STDSSDVEQGTGVLEQEAFHSELPQFDS---TNQLEATLNHLSKWLMVALFSLVLVSRHD 17
           S + SD E+ TG+ +QEA    L +F S    + LEATLN LSKWL+ ALF  V++ RHD
Sbjct: 12  SGNGSDSEESTGLFQQEAVIDGLNEFQSGLLADGLEATLNRLSKWLVAALFGAVILWRHD 71

Query: 16  AKAIW 2
           A+A+W
Sbjct: 72  AEAMW 76


>emb|CBI17482.3| unnamed protein product [Vitis vinifera]
          Length = 224

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 28/58 (48%), Positives = 40/58 (68%), Gaps = 3/58 (5%)
 Frame = -3

Query: 166 EQGTGVLEQEAF---HSELPQFDSTNQLEATLNHLSKWLMVALFSLVLVSRHDAKAIW 2
           ++G  ++E+EAF    SE P       LEATLN LSKWL+ ALF +V++ RHDA+++W
Sbjct: 16  DEGATMIEEEAFITGSSEFPADIVAGGLEATLNRLSKWLVAALFGIVILWRHDAESLW 73


>ref|XP_002263902.1| PREDICTED: dolichyldiphosphatase 1 [Vitis vinifera]
           gi|147812558|emb|CAN70630.1| hypothetical protein
           VITISV_020724 [Vitis vinifera]
          Length = 283

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 28/58 (48%), Positives = 40/58 (68%), Gaps = 3/58 (5%)
 Frame = -3

Query: 166 EQGTGVLEQEAF---HSELPQFDSTNQLEATLNHLSKWLMVALFSLVLVSRHDAKAIW 2
           ++G  ++E+EAF    SE P       LEATLN LSKWL+ ALF +V++ RHDA+++W
Sbjct: 75  DEGATMIEEEAFITGSSEFPADIVAGGLEATLNRLSKWLVAALFGIVILWRHDAESLW 132


>ref|XP_002521546.1| conserved hypothetical protein [Ricinus communis]
           gi|223539224|gb|EEF40817.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 279

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 46/145 (31%), Positives = 65/145 (44%), Gaps = 6/145 (4%)
 Frame = -3

Query: 418 MFESAAILNKPITPSLYFVRQLKLDNCRILNRANTQAVDTDCSKLLYVYNKFDLSSQIII 239
           M  + A+L+KP T  L F R  KLD+C+              S LL    +   S  I  
Sbjct: 1   MVATVALLHKP-TFKLSFSRPSKLDSCK--------------STLLL---RLPASRSIFF 42

Query: 238 KRHRRMSMIHDSITARVSTD---SSDVEQGTGVLEQEAFHSELPQFDS---TNQLEATLN 77
                   +  ++T  V T    S D E+   +L+ +    +   F S       E  LN
Sbjct: 43  SGFGSKKAVSKTMTEMVWTSAFRSGDGEENVKILQPDTLADDSSDFRSQLMARGFEPLLN 102

Query: 76  HLSKWLMVALFSLVLVSRHDAKAIW 2
            LSKWL+ ALF +VL+ RHDA+A+W
Sbjct: 103 RLSKWLVAALFGVVLLWRHDAEALW 127


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