BLASTX nr result

ID: Bupleurum21_contig00028140 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00028140
         (772 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002272015.1| PREDICTED: uncharacterized protein LOC100264...   152   8e-35
emb|CAN82642.1| hypothetical protein VITISV_024902 [Vitis vinifera]   147   2e-33
ref|XP_002299357.1| predicted protein [Populus trichocarpa] gi|2...   143   4e-32
ref|XP_004146046.1| PREDICTED: mediator-associated protein 2-lik...   142   6e-32
gb|ABK94653.1| unknown [Populus trichocarpa]                          142   8e-32

>ref|XP_002272015.1| PREDICTED: uncharacterized protein LOC100264392 isoform 1 [Vitis
           vinifera] gi|225425288|ref|XP_002272062.1| PREDICTED:
           uncharacterized protein LOC100264392 isoform 2 [Vitis
           vinifera] gi|296085538|emb|CBI29270.3| unnamed protein
           product [Vitis vinifera]
          Length = 218

 Score =  152 bits (384), Expect = 8e-35
 Identities = 73/113 (64%), Positives = 91/113 (80%)
 Frame = +2

Query: 422 SDMGYEPAPEFKLNAMDPLIDLNLTDSSELWLIQLPLNQIPDFDGKEVTLKLHHDGHLGS 601
           S+  Y+P PEF  +  D L+DL++TDS ELWLIQ P+NQ PDFDG+E++LKLH DG LG 
Sbjct: 5   SEADYKPPPEFIEDTKDSLVDLSMTDSKELWLIQWPVNQHPDFDGQELSLKLHQDGQLGK 64

Query: 602 FEDSSGKSFDVVNFASPQLDATVFTSSASKTKIVGKIARRVSFVHYPEPEELQ 760
           FE SSGK ++VV+FAS   DATVF SS S++KIVGKI+RRVS VHYPEP+EL+
Sbjct: 65  FEGSSGKLYNVVSFASQDPDATVFISSPSESKIVGKISRRVSLVHYPEPDELE 117


>emb|CAN82642.1| hypothetical protein VITISV_024902 [Vitis vinifera]
          Length = 340

 Score =  147 bits (371), Expect = 2e-33
 Identities = 71/113 (62%), Positives = 89/113 (78%)
 Frame = +2

Query: 422 SDMGYEPAPEFKLNAMDPLIDLNLTDSSELWLIQLPLNQIPDFDGKEVTLKLHHDGHLGS 601
           S+  Y+P PEF  +  D L+DL++TDS ELWLIQ P+NQ PDFDG+E++LKLH DG LG 
Sbjct: 72  SEABYKPPPEFIEDTKDSLVDLSMTDSKELWLIQWPVNQHPDFDGQELSLKLHQDGQLGK 131

Query: 602 FEDSSGKSFDVVNFASPQLDATVFTSSASKTKIVGKIARRVSFVHYPEPEELQ 760
           FE SSGK ++VV+FA    DATVF SS S++KIVGKI+R VS VHYPEP+EL+
Sbjct: 132 FEGSSGKLYNVVSFAXQDPDATVFISSPSESKIVGKISRCVSLVHYPEPDELE 184


>ref|XP_002299357.1| predicted protein [Populus trichocarpa] gi|222846615|gb|EEE84162.1|
           predicted protein [Populus trichocarpa]
          Length = 231

 Score =  143 bits (361), Expect = 4e-32
 Identities = 67/111 (60%), Positives = 92/111 (82%)
 Frame = +2

Query: 431 GYEPAPEFKLNAMDPLIDLNLTDSSELWLIQLPLNQIPDFDGKEVTLKLHHDGHLGSFED 610
           GY+P P F+ ++ +PL D++L+DS+ELWLIQ P+N++PDF+GKE++L L  DG LGSFE 
Sbjct: 9   GYKPEPGFEEDSREPLADISLSDSTELWLIQWPINELPDFNGKELSLSLDQDGCLGSFEA 68

Query: 611 SSGKSFDVVNFASPQLDATVFTSSASKTKIVGKIARRVSFVHYPEPEELQK 763
           S GKSFD+V+ ++  LDATVF SS  +TKIVGKI+R+VS VHYP+P+EL+K
Sbjct: 69  SPGKSFDLVSCSAQGLDATVFLSSELETKIVGKISRQVSLVHYPDPKELEK 119


>ref|XP_004146046.1| PREDICTED: mediator-associated protein 2-like isoform 1 [Cucumis
           sativus] gi|449456621|ref|XP_004146047.1| PREDICTED:
           mediator-associated protein 2-like isoform 2 [Cucumis
           sativus] gi|449507088|ref|XP_004162930.1| PREDICTED:
           mediator-associated protein 2-like isoform 1 [Cucumis
           sativus] gi|449507092|ref|XP_004162931.1| PREDICTED:
           mediator-associated protein 2-like isoform 2 [Cucumis
           sativus]
          Length = 246

 Score =  142 bits (359), Expect = 6e-32
 Identities = 65/111 (58%), Positives = 89/111 (80%)
 Frame = +2

Query: 431 GYEPAPEFKLNAMDPLIDLNLTDSSELWLIQLPLNQIPDFDGKEVTLKLHHDGHLGSFED 610
           GY+P  EF+ +  + L D++LTDS ELWLIQ P NQ PDFDG+E +L+LH DGH+GSF+ 
Sbjct: 13  GYKPPAEFEEDKREFLTDISLTDSEELWLIQWPANQAPDFDGQEFSLQLHPDGHMGSFQG 72

Query: 611 SSGKSFDVVNFASPQLDATVFTSSASKTKIVGKIARRVSFVHYPEPEELQK 763
           SSGKS+DV++  + + +A+VF  S+S T++VGKI+RR+S VHYPEPEEL+K
Sbjct: 73  SSGKSYDVISCVAQEPEASVFLPSSSDTRLVGKISRRISLVHYPEPEELEK 123


>gb|ABK94653.1| unknown [Populus trichocarpa]
          Length = 231

 Score =  142 bits (358), Expect = 8e-32
 Identities = 66/111 (59%), Positives = 92/111 (82%)
 Frame = +2

Query: 431 GYEPAPEFKLNAMDPLIDLNLTDSSELWLIQLPLNQIPDFDGKEVTLKLHHDGHLGSFED 610
           GY+P P F+ ++ +PL D++L+DS+ELWLIQ P+N++PDF+GKE++L L  DG LGSFE 
Sbjct: 9   GYKPEPGFEEDSREPLADISLSDSTELWLIQWPINELPDFNGKELSLSLDQDGCLGSFEA 68

Query: 611 SSGKSFDVVNFASPQLDATVFTSSASKTKIVGKIARRVSFVHYPEPEELQK 763
           S GK+FD+V+ ++  LDATVF SS  +TKIVGKI+R+VS VHYP+P+EL+K
Sbjct: 69  SPGKAFDLVSCSAQGLDATVFLSSELETKIVGKISRQVSLVHYPDPKELEK 119


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