BLASTX nr result

ID: Bupleurum21_contig00028139 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00028139
         (426 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN66576.1| hypothetical protein VITISV_016964 [Vitis vinifera]   103   2e-20
ref|XP_003635668.1| PREDICTED: uncharacterized protein LOC100854...   100   1e-19
emb|CAN76029.1| hypothetical protein VITISV_016069 [Vitis vinifera]   100   1e-19
emb|CAN66637.1| hypothetical protein VITISV_011340 [Vitis vinifera]   100   1e-19
ref|XP_003631792.1| PREDICTED: uncharacterized protein LOC100252...    99   4e-19

>emb|CAN66576.1| hypothetical protein VITISV_016964 [Vitis vinifera]
          Length = 1316

 Score =  103 bits (256), Expect = 2e-20
 Identities = 70/144 (48%), Positives = 84/144 (58%), Gaps = 4/144 (2%)
 Frame = -2

Query: 422 MEDLIVRLRIEEDNKGSEKKTNAS-EAKANVVEVXXXXXXXXXXXXXXKLAPKDGISKGK 246
           +E+LIVRLRIEEDN+ SEKK N S EAKANV+E               +       +  K
Sbjct: 382 LEELIVRLRIEEDNRKSEKKGNNSMEAKANVIEQGPKTNKKRKHGDQNQ---NQESNVAK 438

Query: 245 KFSGKCFNCDKMGHKSSVGSQRRRKQTW*MT--TLRICL-K*ISVLLSPRSTWPKLFMGN 75
           KF GKC+NC K GHKS+    R  K+ W  T  T  IC  K +     P     +LFMGN
Sbjct: 439 KFKGKCYNCGKTGHKSN--DYRNTKEWWVDTGATRHICSNKWMFSTYKPVEQNEELFMGN 496

Query: 74  SATSTIEGEGTVILKMTSGKDLTL 3
           S++S IEG G VILKMTSGK+LTL
Sbjct: 497 SSSSKIEGRGKVILKMTSGKELTL 520


>ref|XP_003635668.1| PREDICTED: uncharacterized protein LOC100854178, partial [Vitis
           vinifera]
          Length = 478

 Score =  100 bits (249), Expect = 1e-19
 Identities = 78/185 (42%), Positives = 90/185 (48%), Gaps = 44/185 (23%)
 Frame = -2

Query: 425 TMEDLIVRLRIEEDNKGSEKKT--NASEAKANVVE--VXXXXXXXXXXXXXXKLAPKDGI 258
           ++EDLI+RLRIEEDN+ SEKK     +EAKAN VE                 KL PK GI
Sbjct: 211 SIEDLIIRLRIEEDNRRSEKKGAHTLNEAKANFVEHGQSSNAKTNNNKGKGSKLGPKGGI 270

Query: 257 SKGKKFSGKCFNCDKMGHKS-------------------------------------SVG 189
           SK  KF GKCFNC K GHKS                                      VG
Sbjct: 271 SKKPKFQGKCFNCGKQGHKSVDCRLPKKNKPKEANVIDDITKNVYDIDLTTVVSEVNLVG 330

Query: 188 SQRRRKQTW*MT--TLRICL-K*ISVLLSPRSTWPKLFMGNSATSTIEGEGTVILKMTSG 18
           S    K+ W  T  T  +C  K +     P     K+FMGNSATS I+G+G VILKMTSG
Sbjct: 331 S--NPKEWWIDTGATRHVCSDKKMFSTFEPIENGEKVFMGNSATSEIKGQGKVILKMTSG 388

Query: 17  KDLTL 3
           K+LTL
Sbjct: 389 KELTL 393


>emb|CAN76029.1| hypothetical protein VITISV_016069 [Vitis vinifera]
          Length = 1096

 Score =  100 bits (249), Expect = 1e-19
 Identities = 78/185 (42%), Positives = 90/185 (48%), Gaps = 44/185 (23%)
 Frame = -2

Query: 425 TMEDLIVRLRIEEDNKGSEKKT--NASEAKANVVE--VXXXXXXXXXXXXXXKLAPKDGI 258
           ++EDLI+RLRIEEDN+ SEKK     +EAKAN VE                 KL PK GI
Sbjct: 132 SIEDLIIRLRIEEDNRRSEKKGAHTLNEAKANFVEHGQSSKAKTNNNKGKGSKLGPKGGI 191

Query: 257 SKGKKFSGKCFNCDKMGHKS-------------------------------------SVG 189
           SK  KF GKCFNC K GHKS                                      VG
Sbjct: 192 SKKPKFQGKCFNCGKQGHKSVDCRLPKKNKPKEANVIDDITKNVYDIDLTAVVSEVNLVG 251

Query: 188 SQRRRKQTW*MT--TLRICL-K*ISVLLSPRSTWPKLFMGNSATSTIEGEGTVILKMTSG 18
           S    K+ W  T  T  +C  K +     P     K+FMGNSATS I+G+G VILKMTSG
Sbjct: 252 S--NPKEWWIDTGATRHVCSDKKMFSTFEPIENGEKVFMGNSATSEIKGQGKVILKMTSG 309

Query: 17  KDLTL 3
           K+LTL
Sbjct: 310 KELTL 314


>emb|CAN66637.1| hypothetical protein VITISV_011340 [Vitis vinifera]
          Length = 1316

 Score =  100 bits (249), Expect = 1e-19
 Identities = 78/185 (42%), Positives = 90/185 (48%), Gaps = 44/185 (23%)
 Frame = -2

Query: 425 TMEDLIVRLRIEEDNKGSEKKT--NASEAKANVVE--VXXXXXXXXXXXXXXKLAPKDGI 258
           ++EDLI+RLRIEEDN+ SEKK     +EAKAN VE                 KL PK GI
Sbjct: 211 SIEDLIIRLRIEEDNRRSEKKGAHTLNEAKANFVEHGQSSKAKTNNNKGKGSKLGPKGGI 270

Query: 257 SKGKKFSGKCFNCDKMGHKS-------------------------------------SVG 189
           SK  KF GKCFNC K GHKS                                      VG
Sbjct: 271 SKKPKFQGKCFNCGKQGHKSVDCRLPKKNKPKEANVIDDITKNVYDIDLTAVVSEVNLVG 330

Query: 188 SQRRRKQTW*MT--TLRICL-K*ISVLLSPRSTWPKLFMGNSATSTIEGEGTVILKMTSG 18
           S    K+ W  T  T  +C  K +     P     K+FMGNSATS I+G+G VILKMTSG
Sbjct: 331 S--NPKEWWIDTGATRHVCSDKKMFSTFEPIENGEKVFMGNSATSEIKGQGKVILKMTSG 388

Query: 17  KDLTL 3
           K+LTL
Sbjct: 389 KELTL 393


>ref|XP_003631792.1| PREDICTED: uncharacterized protein LOC100252656 [Vitis vinifera]
          Length = 946

 Score = 99.0 bits (245), Expect = 4e-19
 Identities = 77/185 (41%), Positives = 89/185 (48%), Gaps = 44/185 (23%)
 Frame = -2

Query: 425 TMEDLIVRLRIEEDNKGSEKKT--NASEAKANVVE--VXXXXXXXXXXXXXXKLAPKDGI 258
           ++EDLI+RLRIEEDN+ SEKK     +EAKAN VE                 KL PK GI
Sbjct: 211 SIEDLIIRLRIEEDNRRSEKKGVHTLNEAKANFVEHGQSSKAKTNNNKGKGSKLGPKGGI 270

Query: 257 SKGKKFSGKCFNCDKMGHKS-------------------------------------SVG 189
           SK  KF GKCFNC K GHKS                                      VG
Sbjct: 271 SKKPKFQGKCFNCGKQGHKSVDCRLPKKNKPKEANVIDNITKNVSNIDLTAVVSEVNLVG 330

Query: 188 SQRRRKQTW*MT--TLRICL-K*ISVLLSPRSTWPKLFMGNSATSTIEGEGTVILKMTSG 18
           S    K+ W  T  T  +C  K +     P     K+FMGNS TS I+G+G VILKMTSG
Sbjct: 331 S--NPKEWWIDTGATRHVCSDKKMFSTFEPIENGEKVFMGNSTTSEIKGQGKVILKMTSG 388

Query: 17  KDLTL 3
           K+LTL
Sbjct: 389 KELTL 393


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