BLASTX nr result

ID: Bupleurum21_contig00028133 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00028133
         (254 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI29927.3| unnamed protein product [Vitis vinifera]              108   6e-22
ref|XP_003554005.1| PREDICTED: GATA transcription factor 9-like ...   102   4e-20
ref|XP_002319169.1| predicted protein [Populus trichocarpa] gi|2...   101   6e-20
ref|XP_003624611.1| GATA transcription factor [Medicago truncatu...   101   7e-20
ref|XP_003548060.1| PREDICTED: GATA transcription factor 9-like ...   100   2e-19

>emb|CBI29927.3| unnamed protein product [Vitis vinifera]
          Length = 265

 Score =  108 bits (269), Expect = 6e-22
 Identities = 52/78 (66%), Positives = 62/78 (79%), Gaps = 8/78 (10%)
 Frame = +2

Query: 44  SPDPPLLQQAYWLADSELILPKQEEVNMIDIKGLN--VQQQ------QPRRCSHCLSQKT 199
           S DPPLLQQAYWLADSELI+PK+EE +  +    N  V+++      QPRRC+HCL+Q+T
Sbjct: 141 SSDPPLLQQAYWLADSELIVPKKEESSSNNNNNNNSMVKEEEEGSNGQPRRCTHCLAQRT 200

Query: 200 PQWRAGPLGPKTLCNACG 253
           PQWRAGPLGPKTLCNACG
Sbjct: 201 PQWRAGPLGPKTLCNACG 218


>ref|XP_003554005.1| PREDICTED: GATA transcription factor 9-like [Glycine max]
          Length = 274

 Score =  102 bits (253), Expect = 4e-20
 Identities = 58/106 (54%), Positives = 67/106 (63%), Gaps = 31/106 (29%)
 Frame = +2

Query: 29  WSQQGSP-------DPPLLQQAYWLADSELILPK-----QEEV------NMIDI------ 136
           WS   +P       DPPLL+QAYWLADSELI+PK     QEEV       +I++      
Sbjct: 122 WSHHLNPQNESLCSDPPLLKQAYWLADSELIMPKPKDEEQEEVVTKEDEKVINVMSKESF 181

Query: 137 ------KGLNVQQQQP-RRCSHCLSQKTPQWRAGPLGPKTLCNACG 253
                 +G N QQ  P RRCSHCL+Q+TPQWRAGPLGPKTLCNACG
Sbjct: 182 GDSELEEGSNGQQPMPTRRCSHCLAQRTPQWRAGPLGPKTLCNACG 227


>ref|XP_002319169.1| predicted protein [Populus trichocarpa] gi|222857545|gb|EEE95092.1|
           predicted protein [Populus trichocarpa]
          Length = 295

 Score =  101 bits (252), Expect = 6e-20
 Identities = 53/105 (50%), Positives = 61/105 (58%), Gaps = 35/105 (33%)
 Frame = +2

Query: 44  SPDPPLLQQAYWLADSELILPKQEEVNMIDI-------KGLNVQ---------------- 154
           S DPPLLQQ YWLADSELI+P +E+ N  D+        G+ V                 
Sbjct: 149 SSDPPLLQQTYWLADSELIMPIKEDSNNTDMDNEVQEESGVGVHDEDIGKVVAVVGSNGS 208

Query: 155 ------------QQQPRRCSHCLSQKTPQWRAGPLGPKTLCNACG 253
                       QQQPRRC+HCL+Q+TPQWRAGPLGPKTLCNACG
Sbjct: 209 KDSLGVLESNNGQQQPRRCTHCLAQRTPQWRAGPLGPKTLCNACG 253


>ref|XP_003624611.1| GATA transcription factor [Medicago truncatula]
           gi|124365580|gb|ABN09814.1| Zinc finger, GATA-type
           [Medicago truncatula] gi|355499626|gb|AES80829.1| GATA
           transcription factor [Medicago truncatula]
          Length = 264

 Score =  101 bits (251), Expect = 7e-20
 Identities = 50/81 (61%), Positives = 56/81 (69%), Gaps = 13/81 (16%)
 Frame = +2

Query: 50  DPPLLQQAYWLADSELILPKQE----------EVNMIDIKGLNVQQQQP---RRCSHCLS 190
           DPPLL+QAYWLADSEL++PK E          E    D +G     Q P   RRC+HCLS
Sbjct: 136 DPPLLKQAYWLADSELMVPKGEKEVTKDCEVVEKERFDFEGFVNNGQNPIPTRRCTHCLS 195

Query: 191 QKTPQWRAGPLGPKTLCNACG 253
           Q+TPQWRAGPLGPKTLCNACG
Sbjct: 196 QRTPQWRAGPLGPKTLCNACG 216


>ref|XP_003548060.1| PREDICTED: GATA transcription factor 9-like [Glycine max]
          Length = 279

 Score =  100 bits (248), Expect = 2e-19
 Identities = 51/100 (51%), Positives = 60/100 (60%), Gaps = 30/100 (30%)
 Frame = +2

Query: 44  SPDPPLLQQAYWLADSELILPKQEEV------------------------------NMID 133
           S DPPLL+QAYWLADSELI+PK+++V                              N  +
Sbjct: 131 SSDPPLLKQAYWLADSELIVPKKKDVEQEEGVVVVVKKEKLGDYYDDDEGDEVNNNNTNN 190

Query: 134 IKGLNVQQQQPRRCSHCLSQKTPQWRAGPLGPKTLCNACG 253
               NVQ   PRRC+HCL+Q+TPQWRAGPLGPKTLCNACG
Sbjct: 191 NNNDNVQHPIPRRCTHCLAQRTPQWRAGPLGPKTLCNACG 230


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