BLASTX nr result

ID: Bupleurum21_contig00028123 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00028123
         (559 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN67499.1| hypothetical protein VITISV_019679 [Vitis vinifera]   169   4e-40
ref|XP_002282068.2| PREDICTED: B3 domain-containing protein Os01...   168   6e-40
emb|CBI32429.3| unnamed protein product [Vitis vinifera]              168   6e-40
ref|XP_002313111.1| predicted protein [Populus trichocarpa] gi|2...   168   6e-40
ref|XP_002324684.1| predicted protein [Populus trichocarpa] gi|2...   164   7e-39

>emb|CAN67499.1| hypothetical protein VITISV_019679 [Vitis vinifera]
          Length = 930

 Score =  169 bits (427), Expect = 4e-40
 Identities = 79/127 (62%), Positives = 101/127 (79%)
 Frame = +2

Query: 179 DTDNDGSEDSEGLRLSQSVVDFKDVQSFKDFNILVNGLIIDSEIPQHLRLKYYELCCSQM 358
           D+D  GSE  E +R S+S VDFK+V+S +DF+ILVNGLII+SE  +HL+ KYYELCCSQ 
Sbjct: 411 DSDGHGSEVLERIRFSESAVDFKEVKSMEDFSILVNGLIINSEFSKHLQTKYYELCCSQK 470

Query: 359 SYLHDQLIDGLNLKLVVGVIFETINIADAIRCTKLTTCCENLKLWDNTLKAFEDLGMKVG 538
           +YLHD L+DGLN KL  G+I ET+NIADAIR +KLTT  +N  +W  TLKAF++LGM V 
Sbjct: 471 TYLHDHLLDGLNYKLAAGIISETVNIADAIRASKLTTSRDNFSIWSKTLKAFQELGMNVS 530

Query: 539 FLRAKIN 559
           FLRA+++
Sbjct: 531 FLRARLD 537


>ref|XP_002282068.2| PREDICTED: B3 domain-containing protein Os01g0234100-like [Vitis
           vinifera]
          Length = 463

 Score =  168 bits (425), Expect = 6e-40
 Identities = 79/127 (62%), Positives = 101/127 (79%)
 Frame = +2

Query: 179 DTDNDGSEDSEGLRLSQSVVDFKDVQSFKDFNILVNGLIIDSEIPQHLRLKYYELCCSQM 358
           D+D  GSE  E +R S+S VDFK+V+S + F+ILVNGLII+SE  +HL+ KYYELCCSQ 
Sbjct: 267 DSDGHGSEVLERIRFSESAVDFKEVKSMEAFSILVNGLIINSEFSKHLQTKYYELCCSQK 326

Query: 359 SYLHDQLIDGLNLKLVVGVIFETINIADAIRCTKLTTCCENLKLWDNTLKAFEDLGMKVG 538
           +YLHD L+DGLN KL  G+I ET+NIADAIR +KLTT  +N  +W  TLKAF++LGM VG
Sbjct: 327 TYLHDHLLDGLNYKLAAGIISETVNIADAIRASKLTTSRDNFSIWSKTLKAFQELGMNVG 386

Query: 539 FLRAKIN 559
           FLRA+++
Sbjct: 387 FLRARLD 393


>emb|CBI32429.3| unnamed protein product [Vitis vinifera]
          Length = 363

 Score =  168 bits (425), Expect = 6e-40
 Identities = 79/127 (62%), Positives = 101/127 (79%)
 Frame = +2

Query: 179 DTDNDGSEDSEGLRLSQSVVDFKDVQSFKDFNILVNGLIIDSEIPQHLRLKYYELCCSQM 358
           D+D  GSE  E +R S+S VDFK+V+S + F+ILVNGLII+SE  +HL+ KYYELCCSQ 
Sbjct: 167 DSDGHGSEVLERIRFSESAVDFKEVKSMEAFSILVNGLIINSEFSKHLQTKYYELCCSQK 226

Query: 359 SYLHDQLIDGLNLKLVVGVIFETINIADAIRCTKLTTCCENLKLWDNTLKAFEDLGMKVG 538
           +YLHD L+DGLN KL  G+I ET+NIADAIR +KLTT  +N  +W  TLKAF++LGM VG
Sbjct: 227 TYLHDHLLDGLNYKLAAGIISETVNIADAIRASKLTTSRDNFSIWSKTLKAFQELGMNVG 286

Query: 539 FLRAKIN 559
           FLRA+++
Sbjct: 287 FLRARLD 293


>ref|XP_002313111.1| predicted protein [Populus trichocarpa] gi|222849519|gb|EEE87066.1|
           predicted protein [Populus trichocarpa]
          Length = 439

 Score =  168 bits (425), Expect = 6e-40
 Identities = 95/195 (48%), Positives = 132/195 (67%), Gaps = 10/195 (5%)
 Frame = +2

Query: 2   SLLQLGAFTRNMN----SDHEEKDLKITE-MAEKHIEQFS-QNHRAQGKKMVALCDVAE- 160
           +LL+L A  + M     + H EK  K++E M +   E  S  N     +K V L  +   
Sbjct: 175 ALLKLEAGVKQMGPINEAVHVEKLSKVSEEMEDLDFEHLSLDNPEKNNEKNVKLACLTTF 234

Query: 161 ---ADYSWMDTDNDGSEDSEGLRLSQSVVDFKDVQSFKDFNILVNGLIIDSEIPQHLRLK 331
              +D    ++++ GSE ++G+RLS+S VDFK+V+ F+DF+ILVNGL+I SE+ + L+ K
Sbjct: 235 GPISDLYEYESEDLGSETTDGIRLSKSAVDFKEVKCFEDFDILVNGLVISSELSKPLQTK 294

Query: 332 YYELCCSQMSYLHDQLIDGLNLKLVVGVIFETINIADAIRCTKLTTCCENLKLWDNTLKA 511
           YY+LCCSQ S+LHD L+DGLN KLVVG++ ETINIADAIR +KLT   E+  +W+ TLKA
Sbjct: 295 YYKLCCSQNSFLHDHLLDGLNCKLVVGMLSETINIADAIRASKLTNSLESFAIWEKTLKA 354

Query: 512 FEDLGMKVGFLRAKI 556
           FE LGM VGFL A++
Sbjct: 355 FEGLGMNVGFLLARL 369


>ref|XP_002324684.1| predicted protein [Populus trichocarpa] gi|222866118|gb|EEF03249.1|
           predicted protein [Populus trichocarpa]
          Length = 404

 Score =  164 bits (416), Expect = 7e-39
 Identities = 80/172 (46%), Positives = 121/172 (70%)
 Frame = +2

Query: 41  SDHEEKDLKITEMAEKHIEQFSQNHRAQGKKMVALCDVAEADYSWMDTDNDGSEDSEGLR 220
           +DH E +++  ++   +      N+   G   + L     +D+S  ++ + G E ++G+R
Sbjct: 167 TDHAEAEMEYQDLEHLYPTNPEDNNTMPGISNIRLI----SDHSENESGDFGFEITDGIR 222

Query: 221 LSQSVVDFKDVQSFKDFNILVNGLIIDSEIPQHLRLKYYELCCSQMSYLHDQLIDGLNLK 400
           +S++VVDFK+V+SF+DF+ILVNGL+I+ E+ +HL++KYYELCCSQ  +LH+  I+GLN K
Sbjct: 223 MSETVVDFKEVRSFEDFDILVNGLVINCELSKHLQMKYYELCCSQKCFLHENFIEGLNCK 282

Query: 401 LVVGVIFETINIADAIRCTKLTTCCENLKLWDNTLKAFEDLGMKVGFLRAKI 556
           L+ G+I ETINIADAIR +K+TT  +N   W+ TLKAF  LGMKV FL A++
Sbjct: 283 LIAGIISETINIADAIRASKVTTSYDNFTTWEKTLKAFLGLGMKVDFLLARL 334


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