BLASTX nr result

ID: Bupleurum21_contig00028113 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00028113
         (633 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002532634.1| membrane associated ring finger 1,8, putativ...   251   1e-64
ref|XP_002270912.1| PREDICTED: uncharacterized protein LOC100258...   246   3e-63
ref|XP_002280349.2| PREDICTED: uncharacterized protein LOC100259...   234   8e-60
ref|XP_002305850.1| predicted protein [Populus trichocarpa] gi|2...   233   2e-59
ref|XP_002534507.1| membrane associated ring finger 1,8, putativ...   226   2e-57

>ref|XP_002532634.1| membrane associated ring finger 1,8, putative [Ricinus communis]
           gi|223527625|gb|EEF29737.1| membrane associated ring
           finger 1,8, putative [Ricinus communis]
          Length = 209

 Score =  251 bits (640), Expect = 1e-64
 Identities = 114/189 (60%), Positives = 145/189 (76%), Gaps = 1/189 (0%)
 Frame = -1

Query: 606 MVDHFVSVVDRSLADSTLEADIVCRSIAACTISK-TEDMAINFTSYRKDVDIESSPRKVA 430
           M DHFV +VDR L +STLEA I  ++     I   ++D   + +++R DVD  SSP K+ 
Sbjct: 1   MGDHFVLLVDRLLTESTLEAAIESKNHWQQAIPPASQDNTTDCSTHRMDVDFRSSPEKLV 60

Query: 429 ECRICHDEDDDSHMEIPCSCCGSLKYAHRECVQRWCNEKGNTICEICHQQFKPDYTAPPL 250
           ECRICHDED+D++ME+PCSCCGSLKYAHR+CVQRWCNEKG+T+CEICHQQFKP YTAPP 
Sbjct: 61  ECRICHDEDEDTNMEVPCSCCGSLKYAHRKCVQRWCNEKGDTLCEICHQQFKPGYTAPPP 120

Query: 249 LFHYGSIPMDFRGSWEISRRDLHNS*FAAMVTGDHASLDPEFDEFSPSTSKSLICCRLVA 70
           LFHYG IPM+FRG+WE+SRRDLHN    AMVT D   +D +FD++   + +SLICCR++ 
Sbjct: 121 LFHYGGIPMNFRGNWEVSRRDLHNPGLIAMVTADREFVDSDFDDYLAPSPRSLICCRIIV 180

Query: 69  IIVLIFYLL 43
           II +I  +L
Sbjct: 181 IIFMILLVL 189


>ref|XP_002270912.1| PREDICTED: uncharacterized protein LOC100258737 [Vitis vinifera]
           gi|296087202|emb|CBI33576.3| unnamed protein product
           [Vitis vinifera]
          Length = 262

 Score =  246 bits (627), Expect = 3e-63
 Identities = 116/189 (61%), Positives = 143/189 (75%), Gaps = 1/189 (0%)
 Frame = -1

Query: 606 MVDHFVSVVDRSLADSTLEADIVCRSI-AACTISKTEDMAINFTSYRKDVDIESSPRKVA 430
           M DHFV +VDR L +STLEA I  ++     T   +EDM  NF+++R DVDI  S R + 
Sbjct: 1   MGDHFVLLVDRLLTESTLEAAIESKNQWQHTTPCGSEDMMTNFSAHRMDVDIGPSQRILV 60

Query: 429 ECRICHDEDDDSHMEIPCSCCGSLKYAHRECVQRWCNEKGNTICEICHQQFKPDYTAPPL 250
           +CRICHDED+DS+ME+PCSC GSLKYAHR CVQRWCNEKGNT CEICHQQF+P+YTAPP 
Sbjct: 61  QCRICHDEDEDSNMEVPCSCAGSLKYAHRGCVQRWCNEKGNTTCEICHQQFRPNYTAPPP 120

Query: 249 LFHYGSIPMDFRGSWEISRRDLHNS*FAAMVTGDHASLDPEFDEFSPSTSKSLICCRLVA 70
           LFHYG IPM+FRG+WE+SRRD ++  F AMV  D   LD + DE+    S+S+ICCR+VA
Sbjct: 121 LFHYGGIPMNFRGNWEVSRRDANHPRFIAMVASDRNFLDTDIDEYPAPNSRSVICCRIVA 180

Query: 69  IIVLIFYLL 43
           II +I  +L
Sbjct: 181 IIFMILLVL 189


>ref|XP_002280349.2| PREDICTED: uncharacterized protein LOC100259487 [Vitis vinifera]
          Length = 240

 Score =  234 bits (598), Expect = 8e-60
 Identities = 110/185 (59%), Positives = 141/185 (76%), Gaps = 1/185 (0%)
 Frame = -1

Query: 606 MVDHFVSVVDRSLADSTLEADIVCRS-IAACTISKTEDMAINFTSYRKDVDIESSPRKVA 430
           M DHFV +VDR L +STLEA I  R+ +   ++S   D  ++  S++ D    SSPRK+ 
Sbjct: 1   MGDHFVLLVDRLLTESTLEAAIESRNRLMQASVSAIADTKVDCKSHKMDFKHGSSPRKLV 60

Query: 429 ECRICHDEDDDSHMEIPCSCCGSLKYAHRECVQRWCNEKGNTICEICHQQFKPDYTAPPL 250
           ECRIC DED+DS+ME PCSCCGSLKYAHR CVQRWCNEKGNT+CEIC QQFKP YTAPP 
Sbjct: 61  ECRICQDEDEDSNMETPCSCCGSLKYAHRSCVQRWCNEKGNTMCEICQQQFKPGYTAPPP 120

Query: 249 LFHYGSIPMDFRGSWEISRRDLHNS*FAAMVTGDHASLDPEFDEFSPSTSKSLICCRLVA 70
           LF +  IP++ RG+WEISR +L+N  F AMV+ D   LDP+++EF+ STS+S++CCR VA
Sbjct: 121 LFQFRGIPINLRGNWEISRGELNNPRFIAMVSTDRNFLDPDYNEFTTSTSRSMMCCRSVA 180

Query: 69  IIVLI 55
           II+++
Sbjct: 181 IILVL 185


>ref|XP_002305850.1| predicted protein [Populus trichocarpa] gi|222848814|gb|EEE86361.1|
           predicted protein [Populus trichocarpa]
          Length = 237

 Score =  233 bits (595), Expect = 2e-59
 Identities = 110/189 (58%), Positives = 143/189 (75%), Gaps = 1/189 (0%)
 Frame = -1

Query: 606 MVDHFVSVVDRSLADSTLEADIVCRSIAACTI-SKTEDMAINFTSYRKDVDIESSPRKVA 430
           M DHFV +VDR L +STLEA I  ++    T+ S +++    F+ +  D+++ S   K  
Sbjct: 1   MGDHFVFLVDRLLTESTLEAAIESQNRLRQTMASASKENTKEFSPHWMDLELTSLAGKSV 60

Query: 429 ECRICHDEDDDSHMEIPCSCCGSLKYAHRECVQRWCNEKGNTICEICHQQFKPDYTAPPL 250
           ECRICH+E+DD +ME+PCSC GSLKYAHR+CVQRWCNEKGNTICEICHQQF+P YTAPP 
Sbjct: 61  ECRICHEEEDDMNMEMPCSCRGSLKYAHRKCVQRWCNEKGNTICEICHQQFEPGYTAPPP 120

Query: 249 LFHYGSIPMDFRGSWEISRRDLHNS*FAAMVTGDHASLDPEFDEFSPSTSKSLICCRLVA 70
           LF YG+IPM+FRG+WEI RRDLHN    AMVT DH  LD +FDE+S  + +S++CCR++A
Sbjct: 121 LFCYGAIPMNFRGNWEIPRRDLHNPPSIAMVTTDHEFLDSDFDEYSAPSPRSVMCCRIIA 180

Query: 69  IIVLIFYLL 43
           II ++  +L
Sbjct: 181 IIFMVLLVL 189


>ref|XP_002534507.1| membrane associated ring finger 1,8, putative [Ricinus communis]
           gi|223525156|gb|EEF27877.1| membrane associated ring
           finger 1,8, putative [Ricinus communis]
          Length = 242

 Score =  226 bits (577), Expect = 2e-57
 Identities = 108/184 (58%), Positives = 136/184 (73%), Gaps = 1/184 (0%)
 Frame = -1

Query: 606 MVDHFVSVVDRSLADSTLEADIVCRS-IAACTISKTEDMAINFTSYRKDVDIESSPRKVA 430
           M DHFV +VDR L +STLEA I  R+ +   T S   +  I+ +S + D    S+P K+ 
Sbjct: 1   MGDHFVLLVDRLLTESTLEAAITSRNQLLQATESAVGETKIDISSKKVDFGDVSTPGKIV 60

Query: 429 ECRICHDEDDDSHMEIPCSCCGSLKYAHRECVQRWCNEKGNTICEICHQQFKPDYTAPPL 250
           ECRIC DED+DS+ME PCSCCGSLKYAHR CVQRWCNEKGNT+CEICHQQFKP YTAPP 
Sbjct: 61  ECRICQDEDEDSNMETPCSCCGSLKYAHRGCVQRWCNEKGNTMCEICHQQFKPGYTAPPP 120

Query: 249 LFHYGSIPMDFRGSWEISRRDLHNS*FAAMVTGDHASLDPEFDEFSPSTSKSLICCRLVA 70
           LF  G +PM+FRG+WE SRRDL+   F AMV+ DH  L+P+++E   +++++LICCR V 
Sbjct: 121 LFQIGRLPMNFRGNWESSRRDLNGPRFIAMVSTDHNFLNPDYEEEYSASTRNLICCRSVL 180

Query: 69  IIVL 58
           I +L
Sbjct: 181 IALL 184


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