BLASTX nr result

ID: Bupleurum21_contig00028097 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00028097
         (882 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003544437.1| PREDICTED: pre-mRNA-splicing factor ISY1 hom...   338   1e-90
ref|XP_003533926.1| PREDICTED: pre-mRNA-splicing factor ISY1 hom...   338   1e-90
emb|CBI37603.3| unnamed protein product [Vitis vinifera]              334   2e-89
ref|XP_002282621.1| PREDICTED: pre-mRNA-splicing factor ISY1 hom...   334   2e-89
ref|XP_004135885.1| PREDICTED: pre-mRNA-splicing factor ISY1 hom...   333   3e-89

>ref|XP_003544437.1| PREDICTED: pre-mRNA-splicing factor ISY1 homolog [Glycine max]
          Length = 299

 Score =  338 bits (866), Expect = 1e-90
 Identities = 162/172 (94%), Positives = 166/172 (96%)
 Frame = -2

Query: 806 MARNEEKAQSMLNRFITMKNEEKQKPKVRRPFLASECRDLSEADKWRQQIMREIGRKVTE 627
           MARNEEKAQSMLNRFITMK EEK+KPK RRPFLASECRDLSEADKWRQQIMREIGRKV E
Sbjct: 1   MARNEEKAQSMLNRFITMKAEEKKKPKERRPFLASECRDLSEADKWRQQIMREIGRKVAE 60

Query: 626 IQNEGLGEHRLRDLNDEINKLLREKVHWERRIIELGGPNYMKHSAKMTDLDGNIVDVPNP 447
           IQNEGLGEHRLRDLNDEINKL+REK HWERRI+ELGGPNY KHSAKMTDLDGNIVDVPNP
Sbjct: 61  IQNEGLGEHRLRDLNDEINKLIREKSHWERRIVELGGPNYSKHSAKMTDLDGNIVDVPNP 120

Query: 446 SGRGPGYRYFGAAKKLPGVKELFEKPPELRKRRTRYDIYKRIDASYYGYRDE 291
            GRGPGYRYFGAAKKLPGVKELFEKPPELR+RRTRYDIYKRIDASYYGYRDE
Sbjct: 121 GGRGPGYRYFGAAKKLPGVKELFEKPPELRRRRTRYDIYKRIDASYYGYRDE 172


>ref|XP_003533926.1| PREDICTED: pre-mRNA-splicing factor ISY1 homolog [Glycine max]
          Length = 299

 Score =  338 bits (866), Expect = 1e-90
 Identities = 162/172 (94%), Positives = 166/172 (96%)
 Frame = -2

Query: 806 MARNEEKAQSMLNRFITMKNEEKQKPKVRRPFLASECRDLSEADKWRQQIMREIGRKVTE 627
           MARNEEKAQSMLNRFITMK EEK+KPK RRPFLASECRDLSEADKWRQQIMREIGRKV E
Sbjct: 1   MARNEEKAQSMLNRFITMKAEEKKKPKERRPFLASECRDLSEADKWRQQIMREIGRKVAE 60

Query: 626 IQNEGLGEHRLRDLNDEINKLLREKVHWERRIIELGGPNYMKHSAKMTDLDGNIVDVPNP 447
           IQNEGLGEHRLRDLNDEINKL+REK HWERRI+ELGGPNY KHSAKMTDLDGNIVDVPNP
Sbjct: 61  IQNEGLGEHRLRDLNDEINKLIREKSHWERRIVELGGPNYSKHSAKMTDLDGNIVDVPNP 120

Query: 446 SGRGPGYRYFGAAKKLPGVKELFEKPPELRKRRTRYDIYKRIDASYYGYRDE 291
            GRGPGYRYFGAAKKLPGVKELFEKPPELR+RRTRYDIYKRIDASYYGYRDE
Sbjct: 121 GGRGPGYRYFGAAKKLPGVKELFEKPPELRRRRTRYDIYKRIDASYYGYRDE 172


>emb|CBI37603.3| unnamed protein product [Vitis vinifera]
          Length = 262

 Score =  334 bits (856), Expect = 2e-89
 Identities = 158/172 (91%), Positives = 168/172 (97%)
 Frame = -2

Query: 806 MARNEEKAQSMLNRFITMKNEEKQKPKVRRPFLASECRDLSEADKWRQQIMREIGRKVTE 627
           MARNEEKAQSMLNRFIT+KNEEK+KPK RRP+LASECRDL+EADKWRQQIMREIGRKV E
Sbjct: 1   MARNEEKAQSMLNRFITLKNEEKKKPKERRPYLASECRDLAEADKWRQQIMREIGRKVAE 60

Query: 626 IQNEGLGEHRLRDLNDEINKLLREKVHWERRIIELGGPNYMKHSAKMTDLDGNIVDVPNP 447
           IQNEGLGEHRLRDLNDEINKL+REK HWERRIIELGGPNY KHSAKMTDL+GNIVDVPNP
Sbjct: 61  IQNEGLGEHRLRDLNDEINKLIREKSHWERRIIELGGPNYTKHSAKMTDLEGNIVDVPNP 120

Query: 446 SGRGPGYRYFGAAKKLPGVKELFEKPPELRKRRTRYDIYKRIDASYYGYRDE 291
           SGRGPGYRYFGAAKKLPGV+ELFEKPPELRKR++RYDIYKRIDASYYGYRD+
Sbjct: 121 SGRGPGYRYFGAAKKLPGVRELFEKPPELRKRKSRYDIYKRIDASYYGYRDD 172


>ref|XP_002282621.1| PREDICTED: pre-mRNA-splicing factor ISY1 homolog isoform 1 [Vitis
           vinifera] gi|359476953|ref|XP_003631919.1| PREDICTED:
           pre-mRNA-splicing factor ISY1 homolog isoform 2 [Vitis
           vinifera] gi|359476955|ref|XP_003631920.1| PREDICTED:
           pre-mRNA-splicing factor ISY1 homolog isoform 3 [Vitis
           vinifera] gi|147773415|emb|CAN60270.1| hypothetical
           protein VITISV_029395 [Vitis vinifera]
          Length = 298

 Score =  334 bits (856), Expect = 2e-89
 Identities = 158/172 (91%), Positives = 168/172 (97%)
 Frame = -2

Query: 806 MARNEEKAQSMLNRFITMKNEEKQKPKVRRPFLASECRDLSEADKWRQQIMREIGRKVTE 627
           MARNEEKAQSMLNRFIT+KNEEK+KPK RRP+LASECRDL+EADKWRQQIMREIGRKV E
Sbjct: 1   MARNEEKAQSMLNRFITLKNEEKKKPKERRPYLASECRDLAEADKWRQQIMREIGRKVAE 60

Query: 626 IQNEGLGEHRLRDLNDEINKLLREKVHWERRIIELGGPNYMKHSAKMTDLDGNIVDVPNP 447
           IQNEGLGEHRLRDLNDEINKL+REK HWERRIIELGGPNY KHSAKMTDL+GNIVDVPNP
Sbjct: 61  IQNEGLGEHRLRDLNDEINKLIREKSHWERRIIELGGPNYTKHSAKMTDLEGNIVDVPNP 120

Query: 446 SGRGPGYRYFGAAKKLPGVKELFEKPPELRKRRTRYDIYKRIDASYYGYRDE 291
           SGRGPGYRYFGAAKKLPGV+ELFEKPPELRKR++RYDIYKRIDASYYGYRD+
Sbjct: 121 SGRGPGYRYFGAAKKLPGVRELFEKPPELRKRKSRYDIYKRIDASYYGYRDD 172


>ref|XP_004135885.1| PREDICTED: pre-mRNA-splicing factor ISY1 homolog [Cucumis sativus]
           gi|449491085|ref|XP_004158794.1| PREDICTED:
           pre-mRNA-splicing factor ISY1 homolog isoform 1 [Cucumis
           sativus] gi|449491087|ref|XP_004158795.1| PREDICTED:
           pre-mRNA-splicing factor ISY1 homolog isoform 2 [Cucumis
           sativus]
          Length = 303

 Score =  333 bits (854), Expect = 3e-89
 Identities = 159/172 (92%), Positives = 166/172 (96%)
 Frame = -2

Query: 806 MARNEEKAQSMLNRFITMKNEEKQKPKVRRPFLASECRDLSEADKWRQQIMREIGRKVTE 627
           MARNEEKAQSMLNRFI +K EEK+KPK RRP+LASECRDL+EADKWRQQIMREIGRKV E
Sbjct: 1   MARNEEKAQSMLNRFIALKAEEKKKPKERRPYLASECRDLAEADKWRQQIMREIGRKVAE 60

Query: 626 IQNEGLGEHRLRDLNDEINKLLREKVHWERRIIELGGPNYMKHSAKMTDLDGNIVDVPNP 447
           IQNEGLGEHRLRDLNDEINKL+REK HWERRIIELGGPNY KHSAKMTDLDGNIVDVPNP
Sbjct: 61  IQNEGLGEHRLRDLNDEINKLIREKSHWERRIIELGGPNYTKHSAKMTDLDGNIVDVPNP 120

Query: 446 SGRGPGYRYFGAAKKLPGVKELFEKPPELRKRRTRYDIYKRIDASYYGYRDE 291
           SGRGPGYRYFGAAKKLPGV+ELFEKPPELRKRRTRYDIYKRIDASYYGYRD+
Sbjct: 121 SGRGPGYRYFGAAKKLPGVRELFEKPPELRKRRTRYDIYKRIDASYYGYRDD 172


Top