BLASTX nr result

ID: Bupleurum21_contig00028096 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00028096
         (269 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002521533.1| ring finger protein, putative [Ricinus commu...   100   9e-20
emb|CAC10211.1| hypothetical protein [Cicer arietinum]                 99   3e-19
tpg|DAA62493.1| TPA: putative RING zinc finger domain superfamil...    96   2e-18
tpg|DAA62491.1| TPA: putative RING zinc finger domain superfamil...    96   2e-18
ref|XP_003555846.1| PREDICTED: E3 ubiquitin ligase BIG BROTHER-r...    96   2e-18

>ref|XP_002521533.1| ring finger protein, putative [Ricinus communis]
           gi|223539211|gb|EEF40804.1| ring finger protein,
           putative [Ricinus communis]
          Length = 316

 Score =  100 bits (250), Expect = 9e-20
 Identities = 49/70 (70%), Positives = 59/70 (84%)
 Frame = +1

Query: 58  FPNDEAYARALQDAEDREMAARLFSLSGISEMVTGEFVEQDDHGRNTQDAWEEVDPDELS 237
           F +DEAYARALQDAE+REMAARL + +GI++ V     + DDHG N+QDAWEEVDPDELS
Sbjct: 167 FSSDEAYARALQDAEEREMAARLLAFAGINDQVE----DTDDHGGNSQDAWEEVDPDELS 222

Query: 238 YEELVALGDV 267
           YEEL+ALG+V
Sbjct: 223 YEELIALGEV 232


>emb|CAC10211.1| hypothetical protein [Cicer arietinum]
          Length = 233

 Score = 99.4 bits (246), Expect = 3e-19
 Identities = 47/73 (64%), Positives = 63/73 (86%), Gaps = 3/73 (4%)
 Frame = +1

Query: 58  FPNDEAYARALQDAEDREMAARLFSLSGISEM---VTGEFVEQDDHGRNTQDAWEEVDPD 228
           F +DEAYARALQ+AE+REMAARL +L+GI+++   +T E  + ++HG N+QDAWE+VDPD
Sbjct: 75  FSSDEAYARALQEAEEREMAARLLALAGINDLSFSITEETEDMEEHGANSQDAWEDVDPD 134

Query: 229 ELSYEELVALGDV 267
           ELSYEEL+ALG+V
Sbjct: 135 ELSYEELLALGEV 147


>tpg|DAA62493.1| TPA: putative RING zinc finger domain superfamily protein [Zea
           mays]
          Length = 322

 Score = 96.3 bits (238), Expect = 2e-18
 Identities = 45/70 (64%), Positives = 58/70 (82%)
 Frame = +1

Query: 58  FPNDEAYARALQDAEDREMAARLFSLSGISEMVTGEFVEQDDHGRNTQDAWEEVDPDELS 237
           F +DEAYARALQDAE+RE+AARL +L+G+S+  T E   ++DH  + Q+AW+EVDPDE S
Sbjct: 167 FEDDEAYARALQDAEEREVAARLMALAGLSDWRTVEVEHEEDHANDPQEAWQEVDPDEYS 226

Query: 238 YEELVALGDV 267
           YEELVALG+V
Sbjct: 227 YEELVALGEV 236


>tpg|DAA62491.1| TPA: putative RING zinc finger domain superfamily protein isoform 1
           [Zea mays] gi|414886478|tpg|DAA62492.1| TPA: putative
           RING zinc finger domain superfamily protein isoform 2
           [Zea mays]
          Length = 322

 Score = 96.3 bits (238), Expect = 2e-18
 Identities = 45/70 (64%), Positives = 58/70 (82%)
 Frame = +1

Query: 58  FPNDEAYARALQDAEDREMAARLFSLSGISEMVTGEFVEQDDHGRNTQDAWEEVDPDELS 237
           F +DEAYARALQDAE+RE+AARL +L+G+S+  T E   ++DH  + Q+AW+EVDPDE S
Sbjct: 167 FEDDEAYARALQDAEEREVAARLMALAGLSDWRTVEVEHEEDHANDPQEAWQEVDPDEYS 226

Query: 238 YEELVALGDV 267
           YEELVALG+V
Sbjct: 227 YEELVALGEV 236


>ref|XP_003555846.1| PREDICTED: E3 ubiquitin ligase BIG BROTHER-related-like isoform 2
           [Glycine max]
          Length = 341

 Score = 96.3 bits (238), Expect = 2e-18
 Identities = 45/72 (62%), Positives = 62/72 (86%), Gaps = 3/72 (4%)
 Frame = +1

Query: 58  FPNDEAYARALQDAEDREMAARLFSLSGISEM---VTGEFVEQDDHGRNTQDAWEEVDPD 228
           F +DEAYARALQ+AE+REMAARL + +GI+++   ++GE  + ++HG N+QDAWE+VDPD
Sbjct: 184 FSSDEAYARALQEAEEREMAARLLAFAGINDLSFSISGEEEDIEEHGANSQDAWEDVDPD 243

Query: 229 ELSYEELVALGD 264
           ELSYEEL+ALG+
Sbjct: 244 ELSYEELLALGE 255


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