BLASTX nr result

ID: Bupleurum21_contig00028074 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00028074
         (473 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002522264.1| replication factor C / DNA polymerase III ga...   160   1e-37
ref|XP_002317391.1| predicted protein [Populus trichocarpa] gi|2...   147   7e-34
ref|XP_004155535.1| PREDICTED: uncharacterized protein LOC101226...   147   1e-33
ref|XP_004134565.1| PREDICTED: uncharacterized protein LOC101212...   147   1e-33
emb|CBI30725.3| unnamed protein product [Vitis vinifera]              144   7e-33

>ref|XP_002522264.1| replication factor C / DNA polymerase III gamma-tau subunit, putative
            [Ricinus communis] gi|223538517|gb|EEF40122.1|
            replication factor C / DNA polymerase III gamma-tau
            subunit, putative [Ricinus communis]
          Length = 1105

 Score =  160 bits (404), Expect = 1e-37
 Identities = 78/120 (65%), Positives = 99/120 (82%)
 Frame = -3

Query: 462  GAWVEHQNSVMTSLAEQKQPSRPDQSKSIVRKKVSLAQIIQRVERGSQQTRWSRRKAVSI 283
            G  V H+NS + S++E+++   P QSKS+VR KVSLA +IQ+ E  +QQT WS+RKAVSI
Sbjct: 986  GESVSHKNSSIGSMSERRKLGEPSQSKSLVRSKVSLAHVIQQAEGCTQQTGWSKRKAVSI 1045

Query: 282  AEKLEQENLRLEPRSRTYLCWKASELTRKRLSRLKVRQRKPKALLKFMSCGKCMSARSSR 103
            AEKLEQENLRLEPRSR+ LCWKAS +TR++LSRLK+R RKP ALLK +SCGKC+S++S R
Sbjct: 1046 AEKLEQENLRLEPRSRSLLCWKASRVTRRKLSRLKIRTRKPHALLKLVSCGKCISSKSPR 1105


>ref|XP_002317391.1| predicted protein [Populus trichocarpa] gi|222860456|gb|EEE98003.1|
            predicted protein [Populus trichocarpa]
          Length = 1190

 Score =  147 bits (372), Expect = 7e-34
 Identities = 71/120 (59%), Positives = 93/120 (77%)
 Frame = -3

Query: 462  GAWVEHQNSVMTSLAEQKQPSRPDQSKSIVRKKVSLAQIIQRVERGSQQTRWSRRKAVSI 283
            G  V ++   M S+ E++    P QSKSIVR KVSLA +IQ+ E  +QQ  WS+ KAVSI
Sbjct: 1071 GESVSNKKPAMGSMVERRILGEPSQSKSIVRSKVSLAHVIQQAEGCTQQAEWSKHKAVSI 1130

Query: 282  AEKLEQENLRLEPRSRTYLCWKASELTRKRLSRLKVRQRKPKALLKFMSCGKCMSARSSR 103
            AEKLEQENLRLEPRSR+ LCWKA+ +TR++LSR+K+R RKP++LLK +SCGKC+S++  R
Sbjct: 1131 AEKLEQENLRLEPRSRSLLCWKATRVTRRKLSRMKIRTRKPRSLLKLVSCGKCLSSKPPR 1190


>ref|XP_004155535.1| PREDICTED: uncharacterized protein LOC101226355 [Cucumis sativus]
          Length = 1120

 Score =  147 bits (370), Expect = 1e-33
 Identities = 71/113 (62%), Positives = 94/113 (83%)
 Frame = -3

Query: 453  VEHQNSVMTSLAEQKQPSRPDQSKSIVRKKVSLAQIIQRVERGSQQTRWSRRKAVSIAEK 274
            V  +NS M+S++E+++     +S+SIVR KVSLA +IQ+ E  SQ++ WS RKAVSIAEK
Sbjct: 1008 VSRKNSTMSSISERREAGAQSRSQSIVRSKVSLAHVIQQAEGCSQRSGWSTRKAVSIAEK 1067

Query: 273  LEQENLRLEPRSRTYLCWKASELTRKRLSRLKVRQRKPKALLKFMSCGKCMSA 115
            LEQENLRLEP+SR+ LCWKAS +TR++LSRLKVR R+P++LLK +SCGKC+SA
Sbjct: 1068 LEQENLRLEPQSRSLLCWKASRVTRRKLSRLKVRTRRPQSLLKLVSCGKCLSA 1120


>ref|XP_004134565.1| PREDICTED: uncharacterized protein LOC101212118 [Cucumis sativus]
          Length = 1120

 Score =  147 bits (370), Expect = 1e-33
 Identities = 71/113 (62%), Positives = 94/113 (83%)
 Frame = -3

Query: 453  VEHQNSVMTSLAEQKQPSRPDQSKSIVRKKVSLAQIIQRVERGSQQTRWSRRKAVSIAEK 274
            V  +NS M+S++E+++     +S+SIVR KVSLA +IQ+ E  SQ++ WS RKAVSIAEK
Sbjct: 1008 VSRKNSTMSSISERREAGAQSRSQSIVRSKVSLAHVIQQAEGCSQRSGWSTRKAVSIAEK 1067

Query: 273  LEQENLRLEPRSRTYLCWKASELTRKRLSRLKVRQRKPKALLKFMSCGKCMSA 115
            LEQENLRLEP+SR+ LCWKAS +TR++LSRLKVR R+P++LLK +SCGKC+SA
Sbjct: 1068 LEQENLRLEPQSRSLLCWKASRVTRRKLSRLKVRTRRPQSLLKLVSCGKCLSA 1120


>emb|CBI30725.3| unnamed protein product [Vitis vinifera]
          Length = 919

 Score =  144 bits (363), Expect = 7e-33
 Identities = 68/115 (59%), Positives = 93/115 (80%)
 Frame = -3

Query: 447  HQNSVMTSLAEQKQPSRPDQSKSIVRKKVSLAQIIQRVERGSQQTRWSRRKAVSIAEKLE 268
            H+ S M S+ E+++      S+S+VR KVSLA +IQ+ E  SQ++ W++RKAVSIAEKLE
Sbjct: 805  HRKSTMASVPERRKFGEQSHSQSLVRSKVSLAHVIQQAEGCSQRSGWTKRKAVSIAEKLE 864

Query: 267  QENLRLEPRSRTYLCWKASELTRKRLSRLKVRQRKPKALLKFMSCGKCMSARSSR 103
            QENLRLEPRSR+ LCWKAS++TR++LSR K+R R+P +LLK +SCGKC+S++S R
Sbjct: 865  QENLRLEPRSRSLLCWKASKVTRRKLSRFKIRTRRPHSLLKLVSCGKCLSSKSPR 919


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