BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00028068
         (573 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002518871.1| conserved hypothetical protein [Ricinus comm...   126   3e-27
ref|XP_003635424.1| PREDICTED: LOW QUALITY PROTEIN: putative rib...   125   6e-27
ref|XP_002525961.1| hypothetical protein RCOM_0596960 [Ricinus c...    99   4e-19
ref|XP_003612608.1| Replication protein A 70 kDa DNA-binding sub...    94   1e-17
ref|XP_002533006.1| RNA binding protein, putative [Ricinus commu...    93   4e-17

>ref|XP_002518871.1| conserved hypothetical protein [Ricinus communis]
            gi|223541858|gb|EEF43404.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 668

 Score =  126 bits (316), Expect = 3e-27
 Identities = 65/194 (33%), Positives = 100/194 (51%), Gaps = 5/194 (2%)
 Frame = +3

Query: 6    WKLKVPPKVKDCVWRAVSGCLPTKHQLSLKNVELDVLCPWCNSEVETIFHALVSCEFVKI 185
            WKLK+P KV++ +W+  S C+ T   L ++ V+LD LC WCN E ET+FH L  C   + 
Sbjct: 432  WKLKIPTKVRNLMWKICSNCIRTAMNLRMRYVDLDPLCKWCNREPETLFHVLFGCSMARE 491

Query: 186  VWERGGLVVQENYDGVFGNWLMEIFKNENSRKREEVAMLCWAVWGARNKLVWKQINSSVE 365
             W+  G       +    +W+   F + +     ++A++C ++W  RN  VW + +++  
Sbjct: 492  CWDLLGFRFSFPTESPICSWIQNFFIDNHEDTCAKMALVCGSLWNQRNHWVWNKQSNTTY 551

Query: 366  HVHMTAKVMLDQWTNAQDKSNVSMESFIP--GDGLD---KWRKPDMESIKINTDAAIFTE 530
             V   A  +L+Q T AQ       E   P  G   D   KW KP++  +KINTD A+F +
Sbjct: 552  GVISPANQLLEQRTRAQSAD----EEIAPPLGHNTDVTRKWTKPELGWLKINTDTALFLK 607

Query: 531  TGSYSFAYVARNSN 572
             G      V R+SN
Sbjct: 608  QGRIGLGCVVRDSN 621


>ref|XP_003635424.1| PREDICTED: LOW QUALITY PROTEIN: putative ribonuclease H protein
            At1g65750-like [Vitis vinifera]
          Length = 820

 Score =  125 bits (313), Expect = 6e-27
 Identities = 64/184 (34%), Positives = 98/184 (53%), Gaps = 5/184 (2%)
 Frame = +3

Query: 3    LWKLKVPPKVKDCVWRAVSGCLPTKHQLSLKNVELDVLCPWCNSEVETIFHALVSCEFVK 182
            LWK+  PPK+ +  WRA   CLPT+  L++++V+  + CP C SE+ET  HALV C   +
Sbjct: 511  LWKVTAPPKILNFAWRAARNCLPTRFALTIRHVDTPMCCPICRSELETTLHALVECVAAR 570

Query: 183  IVWERGGLVVQENYDGVFGNWLMEIFKNENSRKREEVAMLCWAVWGARNKLVWKQINSSV 362
             VW+  GL + +   G F +WL  +F   +     +   +CW +W  RN +VW   N  +
Sbjct: 571  DVWDESGLAMLQGNFGSFVDWLATMFAYCDFVVFAKYLAVCWGLWWRRNDVVW---NGRI 627

Query: 363  EHVHMTAK---VMLDQWTNAQD--KSNVSMESFIPGDGLDKWRKPDMESIKINTDAAIFT 527
             H          ML+ W +A +   + V++ S+       KW+KPD   IKIN D A+F 
Sbjct: 628  WHSQQVVNGCFTMLESWFHANETLATAVTVPSY-----SSKWQKPDYGWIKINVDGAVFP 682

Query: 528  ETGS 539
            + G+
Sbjct: 683  DKGA 686


>ref|XP_002525961.1| hypothetical protein RCOM_0596960 [Ricinus communis]
           gi|223534693|gb|EEF36385.1| hypothetical protein
           RCOM_0596960 [Ricinus communis]
          Length = 270

 Score = 99.4 bits (246), Expect = 4e-19
 Identities = 53/153 (34%), Positives = 78/153 (50%), Gaps = 1/153 (0%)
 Frame = +3

Query: 114 LCPWCNSEVETIFHALVSCEFVKIVWERGGLVVQENYDGVFGNWLMEIFKNENSRKREEV 293
           LCP C++  E+I+HAL+ C FVK VW    LV + N +G   +WL EIF   +      +
Sbjct: 82  LCPLCSNPGESIYHALIDCSFVKEVWVISVLVSRGNRNGSICDWLQEIFTKFDKSTWHCI 141

Query: 294 AMLCWAVWGARNKLVWKQINSSVEHVHMTAKVMLDQWTNAQDKSNVSME-SFIPGDGLDK 470
           A + W +W  RN++VW         +   A   L +W  AQ  +  S + + +    L K
Sbjct: 142 AAIVWNLWIHRNEVVWNSKRKQPRQIVDGAVTYLQRWLIAQQTNPPSPDNNEVFNHNLAK 201

Query: 471 WRKPDMESIKINTDAAIFTETGSYSFAYVARNS 569
           W+KP   S+K N DA+ F + G     YV RN+
Sbjct: 202 WKKPKSGSLKCNVDASTFNQQGMIGAGYVLRNT 234


>ref|XP_003612608.1| Replication protein A 70 kDa DNA-binding subunit [Medicago
            truncatula] gi|355513943|gb|AES95566.1| Replication
            protein A 70 kDa DNA-binding subunit [Medicago
            truncatula]
          Length = 1723

 Score = 94.4 bits (233), Expect = 1e-17
 Identities = 60/194 (30%), Positives = 85/194 (43%), Gaps = 4/194 (2%)
 Frame = +3

Query: 3    LWKLKVPPKVKDCVWRAVSGCLPTKHQLSLKNVELDVLCPWCNSEVETIFHALVSCEFVK 182
            LW LKVPPKVK  +WR+    LPT+ +L  + V     C  C +E E   H    C   +
Sbjct: 1420 LWNLKVPPKVKTFLWRSCRNALPTRVRLQDRGVNCTKTCALCENEDEDSMHLFFYCTKSR 1479

Query: 183  IVWERGGL--VVQE--NYDGVFGNWLMEIFKNENSRKREEVAMLCWAVWGARNKLVWKQI 350
              W++ GL   VQ+    +  FG  + EI +  +S +R   A + W++W  RN  +W+  
Sbjct: 1480 QCWQQLGLWSKVQQKAQLNLSFGVTMFEILQELDSSQRVIWACVMWSIWKQRNDCIWRNE 1539

Query: 351  NSSVEHVHMTAKVMLDQWTNAQDKSNVSMESFIPGDGLDKWRKPDMESIKINTDAAIFTE 530
              +   V      +L  W NAQ                D WRKPD    K N DAA F E
Sbjct: 1540 VMTTAAVRDRGLNLLTGWQNAQ----------------DIWRKPDEGHFKCNVDAAFFKE 1583

Query: 531  TGSYSFAYVARNSN 572
            +         R+ +
Sbjct: 1584 SNRVGIGICIRDDS 1597


>ref|XP_002533006.1| RNA binding protein, putative [Ricinus communis]
           gi|223527217|gb|EEF29381.1| RNA binding protein,
           putative [Ricinus communis]
          Length = 197

 Score = 92.8 bits (229), Expect = 4e-17
 Identities = 56/163 (34%), Positives = 80/163 (49%), Gaps = 1/163 (0%)
 Frame = +3

Query: 84  LSLKNVELDVLCPWCNSEVETIFHALVSCEFVKIVWERGGLVVQENYDGVFGNWLMEIFK 263
           L LK V +  LCP C+   E+I++AL+ C FVK VW    L+ + N +G   +WL E+F 
Sbjct: 4   LVLKRVNVQDLCPLCSKPGESIYYALIDCSFVKEVWVISVLISRGNRNGSICDWLQEMFT 63

Query: 264 NENSRKREEVAMLCWAVWGARNKLVWKQINSSVEHVHMTAKVMLDQWTNAQDKSNVSME- 440
                    +A+L W +W  RN++VW         +   A   L +W  AQ  +  S + 
Sbjct: 64  KFEKSTWGCIAVLVWNLWIHRNEVVWYSKRKQPTQIVDGAVTYLHKWLIAQQTNPPSPDN 123

Query: 441 SFIPGDGLDKWRKPDMESIKINTDAAIFTETGSYSFAYVARNS 569
           S +    L KW+KP     K N DAAIF + G      V RN+
Sbjct: 124 SGLFHHNLAKWKKPKTGWPKCNIDAAIFNQQGMIGADCVLRNT 166